RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Defa34D3Z0J0 93 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Defa37K9J724 93 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 P01753 117 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Ca1P13634 261 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Defa5P28312 93 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Olfr1367Q8VFG2 316 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Tmem14cQ9CQN6 114 aa10.88□□□□□ -0.67
Nup88-202ENSMUST00000108530 Hivep1Q03172 2688 aa10.87□□□□□ -0.67
Nup88-202ENSMUST00000108530 PerpQ9JK95 193 aa10.87□□□□□ -0.67
Nup88-202ENSMUST00000108530 Defa6P50704 93 aa10.87□□□□□ -0.67
Nup88-202ENSMUST00000108530 CdsnQ7TPC1 561 aa10.87□□□□□ -0.67
Nup88-202ENSMUST00000108530 Trav16d-dv11A0A075B617 117 aa10.86□□□□□ -0.67
Nup88-202ENSMUST00000108530 Ceacam15A0A0B4J1L0 234 aa10.86□□□□□ -0.67
Nup88-202ENSMUST00000108530 Olfr313Q5NC55 308 aa10.86□□□□□ -0.67
Nup88-202ENSMUST00000108530 Tctex1d2Q9CQ66 144 aa10.86□□□□□ -0.67
Nup88-202ENSMUST00000108530 Tenm1Q9WTS4 2731 aa10.86□□□□□ -0.67
Nup88-202ENSMUST00000108530 Trav6n-6A0A075B6B2 114 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 Defa30E9QPZ2 93 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 MycbQ6P8Z1 170 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 Nbeal2Q6ZQA0 2742 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 Trav14-2A0A075B694 121 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 Trbv13-1A0A0B4J1P8 112 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 P01786 117 aa10.85□□□□□ -0.67
Nup88-202ENSMUST00000108530 Dkk2Q9QYZ8 259 aa10.84□□□□□ -0.67
Nup88-202ENSMUST00000108530 Nsd1O88491 2588 aaKnown RBP10.84□□□□□ -0.67
Nup88-202ENSMUST00000108530 PrlhG3UWC3 86 aa10.84□□□□□ -0.67
Nup88-202ENSMUST00000108530 Cdx4Q07424 282 aa10.84□□□□□ -0.67
Nup88-202ENSMUST00000108530 Cd164l2Q9D6W7 172 aa10.84□□□□□ -0.67
Nup88-202ENSMUST00000108530 BC107364E9Q5A2 140 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ly6c2P0CW03 131 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Q3UNZ8 350 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ighv6-7A0A0A6YWU3 119 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Cox6b1P56391 86 aaKnown RBP10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 G0s2Q61585 103 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Olfr498Q8VEW2 330 aa10.83□□□□□ -0.68
Nup88-202ENSMUST00000108530 Tmem136Q3TYE7 245 aa10.82□□□□□ -0.68
Nup88-202ENSMUST00000108530 Rnf114Q9ET26 229 aa10.82□□□□□ -0.68
Nup88-202ENSMUST00000108530 Stab1Q8R4Y4 2571 aa10.82□□□□□ -0.68
Nup88-202ENSMUST00000108530 Gm26727M0QWT1 121 aa10.82□□□□□ -0.68
Nup88-202ENSMUST00000108530 TctaQ8VEA7 122 aa10.82□□□□□ -0.68
Nup88-202ENSMUST00000108530 Trdv2-1A0A0G2JGB9 116 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 Gm10490F6VBM2 120 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 SbpP15501 199 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 Fam110dQ80X91 271 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 MturnQ8CGA4 131 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 Lypd5Q9D7Z7 256 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 1500011B03RikQ3TTH7 73 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 Snai3Q9QY31 287 aa10.81□□□□□ -0.68
Nup88-202ENSMUST00000108530 Gm17359A0A0G2JEB7 487 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Defa9P50707 93 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Sumo2P61957 95 aaKnown RBP10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Sdhaf1Q3U276 118 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 PmvkQ9D1G2 192 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ighv1-66A0A075B5X5 117 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Gm20499D3Z4G5 72 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Csn3P06796 181 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 P0C913 63 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Cend1Q9JKC6 149 aa10.8□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ighv8-8A0A0A6YXQ0 119 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Htr1dQ61224 374 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ndufa4Q62425 82 aaKnown RBP10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Iah1Q9DB29 249 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Rpl35aO55142 110 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Defa24Q5G865 93 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Malsu1Q9CWV0 228 aa10.79□□□□□ -0.68
Nup88-202ENSMUST00000108530 Ighv2-6A0A075B6A7 116 aa10.78□□□□□ -0.68
Nup88-202ENSMUST00000108530 Trbv16A0A0B4J1H3 115 aa10.78□□□□□ -0.68
Nup88-202ENSMUST00000108530 Gm17732E9Q5I2 61 aa10.78□□□□□ -0.68
Nup88-202ENSMUST00000108530 Igkv4-68A0A0B4J1I7 117 aa10.77□□□□□ -0.68
Nup88-202ENSMUST00000108530 B230217C12RikE9Q3Z1 139 aa10.77□□□□□ -0.68
Nup88-202ENSMUST00000108530 Tm4sf20Q9CQY8 226 aa10.77□□□□□ -0.68
Nup88-202ENSMUST00000108530 Trav9n-2A0A0G2JDP3 113 aa10.77□□□□□ -0.69
Nup88-202ENSMUST00000108530 CrxO54751 299 aa10.77□□□□□ -0.69
Nup88-202ENSMUST00000108530 Pglyrp1O88593 182 aa10.77□□□□□ -0.69
Nup88-202ENSMUST00000108530 OtorQ9JIE3 128 aa10.77□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm45521A0A1B0GRK0 198 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 P01741 114 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 NpsP0C0P8 89 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm7489Q3UT34 171 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm815Q3UWS2 115 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Ndufs7Q9DC70 224 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Fn1P11276 2477 aaKnown RBP10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Ifi27l2aQ8R412 90 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Mrpl35Q9CQL6 188 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Tomm6Q9CQN3 74 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Esm1Q9QYY7 184 aa10.76□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm10271F6WY25 52 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 H2-DMb1P35737 261 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Tcl1b4P56844 120 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Mllt11P97783 90 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 A830031A19RikQ8BNT5 113 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 GalmQ8K157 342 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 PpdpfQ9CR37 115 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Tspo2Q9CRZ8 162 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Tex48Q9DA81 110 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Gm16442D3YZG3 307 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 P01738 130 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 Cox8bP48772 70 aa10.75□□□□□ -0.69
Nup88-202ENSMUST00000108530 P06334 169 aa10.74□□□□□ -0.69
Nup88-202ENSMUST00000108530 Dppa2Q9CWH0 301 aa10.74□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 85.7 ms