RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ndufa12Q7TMF3 145 aaKnown RBP9.39□□□□□ -0.91
Col8a1-201ENSMUST00000089332 1500011B03RikQ3TTH7 73 aa9.39□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Atp6v0e2Q91XE7 81 aa9.38□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Trav12-3A0A075B648 115 aa9.38□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Pcnx3Q8VI59 2028 aa9.38□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Gm15294V9GXA7 121 aa9.38□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Spink12Q9D256 87 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Fam241bQ9D882 120 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Ighv2-7A0A075B5Q8 116 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 HelzQ6DFV5 1964 aaKnown RBP9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Zfand3Q497H0 227 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Foxc1Q61572 553 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Zfp951A0A087WRH0 451 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 PrcdQ00LT2 53 aa9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Nup210Q9QY81 1886 aaKnown RBP9.37□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Igkv4-57A0A0A6YYE7 117 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Rp1l1Q8CGM2 1859 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 P01837 106 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Prp2P05143 317 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Ndufs7Q9DC70 224 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Nav2E9Q842 2432 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Rnase1P00683 149 aa9.36□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Ighv1-53A0A075B5W3 117 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 P01748 117 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Cox7a1P56392 80 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Ang4Q3TMQ6 144 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Rmi2Q3UPE3 149 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Arhgef17Q80U35 2057 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 4930415O20RikQ8CDT5 131 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Col24a1Q30D77 1733 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Wfdc15bQ9JHY4 80 aa9.35□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Ighv6-7A0A0A6YWU3 119 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 P01658 132 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Fam24aQ8CF27 98 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Trbv16A0A0B4J1H3 115 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Tm2d2Q8R0I4 213 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 MplkipQ9D011 178 aa9.34□□□□□ -0.91
Col8a1-201ENSMUST00000089332 Defb29Q8BGW9 78 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gm9949Q8C9F4 104 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Obox8V9GWY9 217 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Trav12d-3A0A075B6A4 115 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Ccl25O35903 144 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Clec4b2Q67DU8 208 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Chd8Q09XV5 2582 aaKnown RBP9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Piezo2Q8CD54 2822 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Tln1P26039 2541 aaKnown RBP9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Trav6n-6A0A075B6B2 114 aa9.33□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Znf672Q99LH4 468 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 IgipA0A1B0GR74 53 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 1810032O08RikE9PZV8 113 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Sptbn4E9PX29 2561 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Trav3-4A0A075B654 114 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gm20730A0A075B5J6 119 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gm14137Q8CE97 175 aa9.32□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Igkv6-13A0A0G2JGY3 119 aa9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 SelenowP63300 88 aa9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Lmo4P61969 165 aa9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Timm17aQ9Z0V8 171 aa9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Sorl1O88307 2215 aaKnown RBP9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Wdr90Q6ZPG2 1874 aa9.31□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Vsig4F6TUL9 280 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 7420426K07RikQ3UX66 186 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Cfap126Q6P8X9 189 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Dkk4Q8VEJ3 221 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Fam240bJ3QMB3 78 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gm9958Q8C9U4 106 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Igkv8-26A0A075B5N5 123 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Lst1O08843 95 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Plscr4P58196 326 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Crip1P63254 77 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Pkd1l2Q7TN88 2461 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Pet100P0DJE0 76 aa9.3□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Znrf2Q71FD5 238 aa9.29□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gm9936Q8C864 160 aa9.29□□□□□ -0.92
Col8a1-201ENSMUST00000089332 1700012A03RikQ9DAF1 130 aa9.29□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Sprr3O09116 238 aa9.29□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Ang3P97802 145 aa9.29□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Trav4d-3A0A075B625 110 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Odf3l1Q810P2 275 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Odf3Q920N1 254 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Prh1P05142 261 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Tmem223Q9CQE2 199 aaKnown RBP9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Cox7b2Q9D2H1 82 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 OdaphJ3QNT8 126 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Egr2P08152 470 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Ly6g5bQ8K1T4 194 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 P01729 129 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Fam19a4Q7TPG5 135 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Gphb5Q812B2 130 aa9.28□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Runx1Q03347 451 aa9.27□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Notch4P31695 1964 aa9.27□□□□□ -0.92
Col8a1-201ENSMUST00000089332 Trbv13-1A0A0B4J1P8 112 aa9.27□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Igkv1-122A0A140T8M9 119 aa9.27□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Camk2n2Q78WH7 79 aa9.27□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Igkv4-58A0A0G2JGI6 119 aa9.27□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Q9CX25 107 aa9.27□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Lce6aD3YV94 81 aa9.26□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Gm9925F6T2U3 160 aa9.26□□□□□ -0.93
Col8a1-201ENSMUST00000089332 P01820 115 aa9.26□□□□□ -0.93
Col8a1-201ENSMUST00000089332 Foxi2Q3I5G5 311 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 64.3 ms