RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 P04944 107 aa16.66■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Cfap126Q6P8X9 189 aa16.66■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Anapc1P53995 1944 aaKnown RBP16.66■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Igkv8-26A0A075B5N5 123 aa16.65■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 AtrxQ61687 2476 aaKnown RBP16.65■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Defb47Q30KN1 79 aa16.65■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Greb1Q3UHK3 1954 aa16.64■□□□□ 0.26
Smarcc1-201ENSMUST00000088716 Glrp1E9Q9S8 174 aa16.64■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Timm17aQ9Z0V8 171 aa16.64■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Sptan1P16546 2472 aaKnown RBP16.64■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Vsig4F6TUL9 280 aa16.64■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Plscr4P58196 326 aa16.64■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Plxnb1Q8CJH3 2119 aa16.63■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 NrgnP60761 78 aa16.63■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Egr2P08152 470 aa16.63■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Col5a3Q9JLI2 1739 aa16.63■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Crybg1A0A0G2JG52 2065 aa16.63■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 IgipA0A1B0GR74 53 aa16.62■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 1810032O08RikE9PZV8 113 aa16.62■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Trbv16A0A0B4J1H3 115 aa16.62■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Col8a2P25318 699 aa16.61■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Rpl39P62892 51 aa16.61■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Trav4d-3A0A075B625 110 aa16.61■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 CenpeQ6RT24 2474 aaKnown RBP16.61■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Crip1P63254 77 aa16.61■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Tcf20Q9EPQ8 1987 aa16.6■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Fam19a4Q7TPG5 135 aa16.6■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Hrct1Q9D6B9 109 aa16.6■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Col6a4A2AX52 2309 aa16.6■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Rbmy1bQ60990 380 aa16.6■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Cox7cP17665 63 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Rnase1P00683 149 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Pip4p1Q3TWL2 284 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Zfand3Q497H0 227 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 MifP34884 115 aaKnown RBP16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Trav4-3A0A0B4J1K1 110 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Gm10518F6UQQ9 182 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 Trav13d-4A0A0G2JFX3 110 aa16.59■□□□□ 0.25
Smarcc1-201ENSMUST00000088716 FancmQ8BGE5 2021 aa16.58■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Cox7b2Q9D2H1 82 aa16.58■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 C920008G01RikA0A0B4J1N1 112 aa16.58■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm10251J3QPM5 127 aa16.58■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm2916Q9D9B9 127 aa16.58■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Arhgap21Q6DFV3 1944 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Ighv1-62-2A0A0A6YXZ4 119 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Ly6g5bQ8K1T4 194 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Ucn2Q99ML8 113 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Jmjd1cQ69ZK6 2350 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 7420426K07RikQ3UX66 186 aa16.57■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 1700012A03RikQ9DAF1 130 aa16.56■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Col24a1Q30D77 1733 aa16.56■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Obox8V9GWY9 217 aa16.56■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Cdpf1Q8R3A2 119 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Mlst8Q9DCJ1 326 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Odf3l1Q810P2 275 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Tmem223Q9CQE2 199 aaKnown RBP16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 ColqO35348 457 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Sigmar1O55242 223 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Camk2n2Q78WH7 79 aa16.55■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Trav13n-1A0A0G2JEU8 110 aa16.54■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm9958Q8C9U4 106 aa16.54■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Mrpl35Q9CQL6 188 aa16.54■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm17472A0A075B683 117 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Ociad2Q9D8W7 154 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Prpf8Q99PV0 2335 aaKnown RBP16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Igkv8-18A0A0B4J1J3 123 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Tmem243B2RVB9 118 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Arfgef3Q3UGY8 2170 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm14137Q8CE97 175 aa16.53■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gata1P17679 413 aa16.52■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 B9d2Q3UK10 175 aa16.52■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Higd2aQ9CQJ1 106 aa16.52■□□□□ 0.24
Smarcc1-201ENSMUST00000088716 Gm10295Q8CCF3 114 aa16.51■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Reg3bP35230 175 aa16.51■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Spink10Q8CAC8 162 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 9430069I07RikQ9CX21 111 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Trav13d-1A0A075B606 110 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Oxld1Q9CR10 201 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Igkv3-5A0A140T8M6 119 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Iglc1A0A0G2JE99 106 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Igkv1-88A0A140T8N1 120 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 P01843 105 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 4930470P17RikQ9D542 155 aa16.5■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Trav13-2A0A075B649 110 aa16.49■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Ebi3O35228 228 aa16.49■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Gm10735Q3US96 136 aa16.49■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 NpyP57774 97 aa16.49■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Parp4E9PYK3 1969 aa16.49■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Heatr5aQ5PRF0 2038 aa16.48■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Gm20726G3UX18 150 aa16.48■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Gm21060J3KMU4 56 aa16.48■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Rbm3O89086 153 aaKnown RBP16.48■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Col4a6B1AVK5 1691 aa16.46■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Sec16aA2AIX1 2377 aa16.46■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 P01820 115 aa16.46■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 P84751 237 aa16.46■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Trav13-4-dv7A0A075B6C2 110 aa16.46■□□□□ 0.23
Smarcc1-201ENSMUST00000088716 Rpl18aP62717 176 aaKnown RBP16.46■□□□□ 0.22
Smarcc1-201ENSMUST00000088716 Klk5Q9D140 293 aa16.46■□□□□ 0.22
Smarcc1-201ENSMUST00000088716 Tmem258P61166 79 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 135 ms