RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Ighv1-53A0A075B5W3 117 aa11.76□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Glrp1E9Q9S8 174 aa11.76□□□□□ -0.53
Atg4d-201ENSMUST00000065005 P01748 117 aa11.76□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Myo7bQ99MZ6 2113 aa11.76□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Foxi2Q3I5G5 311 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Cacna1gQ5SUF7 2381 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Trav6n-6A0A075B6B2 114 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Med12A2AGH6 2190 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 MsmpB1AWI6 139 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Gm17577J3QNF7 156 aa11.75□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Rpl39P62892 51 aa11.74□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Eml5Q8BQM8 1977 aa11.74□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Gm15217A2CG07 155 aa11.74□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Qrich2A0A140LIY9 2337 aa11.74□□□□□ -0.53
Atg4d-201ENSMUST00000065005 9930022D16RikQ8BG27 128 aa11.73□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Clec4b2Q67DU8 208 aa11.73□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Trav13-4-dv7A0A075B6C2 110 aa11.73□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Trav13d-1A0A075B606 110 aa11.73□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Tmem258P61166 79 aa11.73□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Klk5Q9D140 293 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 B230359F08RikA0A0B4J1K3 109 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Egr2P08152 470 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 9130230L23RikQ8CC80 163 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 MylkQ6PDN3 1941 aaKnown RBP11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Iglv1A0A075B663 117 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Tmem131O70472 1877 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Col8a2P25318 699 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Spink8Q09TK9 105 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Crybg1A0A0G2JG52 2065 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 CrygdP04342 174 aa11.72□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Abca1P41233 2261 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Trav13-1A0A075B644 110 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 C920008G01RikA0A0B4J1N1 112 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Gm10638F6QEG2 257 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Tmem223Q9CQE2 199 aaKnown RBP11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Klk12B2RVZ0 247 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Fam19a4Q7TPG5 135 aa11.71□□□□□ -0.53
Atg4d-201ENSMUST00000065005 Trav9n-4A0A075B631 113 aa11.71□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm17677B3GLJ5 116 aa11.71□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm9936Q8C864 160 aa11.71□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Prop1P97458 223 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Hrct1Q9D6B9 109 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Vwa8Q8CC88 1905 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Cfap46E9Q2C0 2641 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Igkv3-4A0A140T8Q4 119 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Mrpl35Q9CQL6 188 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 4930470P17RikQ9D542 155 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Wfdc2Q9DAU7 174 aa11.7□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm20708H3BKF4 155 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Pip4p1Q3TWL2 284 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Vsig4F6TUL9 280 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Fam240bJ3QMB3 78 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Igf2rQ07113 2483 aaKnown RBP11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Igkv2-109A0A075B5K6 120 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm37389A0A0A6YW05 95 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trav13n-2A0A0G2JF93 110 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trip12G5E870 2025 aaKnown RBP11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Fgf6P21658 208 aa11.69□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Ptprz1B9EKR1 2312 aa11.68□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Sh2d1aO88890 126 aa11.68□□□□□ -0.54
Atg4d-201ENSMUST00000065005 E030018B13RikJ3QMS9 113 aa11.68□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Defb12Q8K4N3 78 aa11.68□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Nup210lQ9D2F7 1881 aa11.68□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Fam222aQ6PGH4 453 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Spry2Q9QXV8 315 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 P01729 129 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Acyp1P56376 99 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Map6d1Q14BB9 191 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trav4d-3A0A075B625 110 aa11.67□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trav4-3A0A0B4J1K1 110 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 P84751 237 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Pcnx1Q9QYC1 2344 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Cnot1Q6ZQ08 2375 aaKnown RBP11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm10542F6XDR3 90 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 9530003J23RikQ8BM26 151 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Igkv3-3A0A140T8Q0 119 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 AngP21570 145 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm14137Q8CE97 175 aa11.66□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trbv16A0A0B4J1H3 115 aa11.65□□□□□ -0.54
Atg4d-201ENSMUST00000065005 P04943 107 aa11.65□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Trav12d-3A0A075B6A4 115 aa11.65□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Spink4O35679 86 aa11.65□□□□□ -0.54
Atg4d-201ENSMUST00000065005 Gm10647E9Q8X0 124 aa11.64□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Igkv1-35A0A0G2JDE5 120 aa11.64□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Gm12353A2AGJ4 60 aa11.64□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Rspo3Q2TJ95 277 aa11.64□□□□□ -0.55
Atg4d-201ENSMUST00000065005 9430069I07RikQ9CX21 111 aa11.64□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Fam19a1Q7TPG8 133 aa11.63□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Ighv1-62-2A0A0A6YXZ4 119 aa11.63□□□□□ -0.55
Atg4d-201ENSMUST00000065005 PscaP57096 123 aa11.63□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Nlrc5C3VPR6 1915 aa11.62□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Ighv1-11A0A0A6YWI9 117 aa11.62□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Crip1P63254 77 aa11.62□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Zfand3Q497H0 227 aa11.62□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Col6a4A2AX52 2309 aa11.61□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Odf3l1Q810P2 275 aa11.61□□□□□ -0.55
Atg4d-201ENSMUST00000065005 SptssbQ925E8 76 aa11.61□□□□□ -0.55
Atg4d-201ENSMUST00000065005 MyofQ69ZN7 2048 aaKnown RBP11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 Trav7-6A0A075B640 112 aa11.6□□□□□ -0.55
Atg4d-201ENSMUST00000065005 IgipA0A1B0GR74 53 aa11.6□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 161.3 ms