RNA–Protein interactions for RNA: ENSMUST00000039144.6

Clstn1-201, Transcript of Calsyntenin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Clstn1, Length 3,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clstn1-201ENSMUST00000039144 Arpc1aQ9R0Q6 370 aa11.48□□□□□ -0.57
Clstn1-201ENSMUST00000039144 Utp20Q5XG71 2788 aaKnown RBP11.48□□□□□ -0.57
Clstn1-201ENSMUST00000039144 Tmem262D3Z338 116 aa11.47□□□□□ -0.57
Clstn1-201ENSMUST00000039144 P06334 169 aa11.47□□□□□ -0.57
Clstn1-201ENSMUST00000039144 Setd2E9Q5F9 2537 aa11.47□□□□□ -0.57
Clstn1-201ENSMUST00000039144 March3Q8BRX9 218 aa11.47□□□□□ -0.57
Clstn1-201ENSMUST00000039144 Gm26938S4R185 226 aa11.47□□□□□ -0.57
Clstn1-201ENSMUST00000039144 Ube2d1P61080 147 aaKnown RBP11.46□□□□□ -0.57
Clstn1-201ENSMUST00000039144 MrapQ9D159 127 aa11.46□□□□□ -0.57
Clstn1-201ENSMUST00000039144 D130052B06RikQ3UW13 202 aa11.46□□□□□ -0.58
Clstn1-201ENSMUST00000039144 1700056E22RikF7CNM6 234 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ly6lH3BJG9 140 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 MdfiP70331 251 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Srsf2Q62093 221 aaKnown RBP11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Olfr553Q7TRS6 326 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 OtogO55225 2910 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ighv1-31A0A0A6YWK5 117 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Igkv4-71A0A0G2JEH0 117 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Nbl1Q61477 178 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Wfdc15bQ9JHY4 80 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ccl19O70460 108 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Prp2P05143 317 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ube2d3P61079 147 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ube2d2P62838 147 aa11.45□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Tcrg-C3L7N479 172 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 P03985 172 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 SvipQ3UZP4 77 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ang5Q5GAN1 145 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Defa26Q3L180 93 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Klhdc1Q80YG3 406 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Triap1Q9D8Z2 76 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ccl24Q9JKC0 119 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Bub3Q9WVA3 326 aa11.44□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Mrps12O35680 139 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Q4KKZ1 196 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 LrbaQ9ESE1 2856 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Samd5Q3V1H9 173 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Gm10295Q8CCF3 114 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Obox8V9GWY9 217 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ighv8-5A0A0A6YY60 119 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Defa16P50714 93 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Defb2P82020 71 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Fhl1P97447 280 aaKnown RBP11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Q9D8Q6 235 aa11.43□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Igkv4-59A0A0B4J1I8 117 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Amn1B8JKV0 258 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Mllt11P97783 90 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Hist1h1tQ07133 208 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Atp6v0e2Q91XE7 81 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 C920008G01RikA0A0B4J1N1 112 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Sumo2P61957 95 aaKnown RBP11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Samd10Q7TST3 202 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Crip2Q9DCT8 208 aaKnown RBP11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Trbv17A0A140T8P8 114 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Gm6812B1AXU1 112 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Scgb1b24B1B0N6 92 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 1700020N15RikL7MTX3 112 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Srp14P16254 110 aaKnown RBP11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Sdhaf1Q3U276 118 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Smr3aQ61900 147 aa11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Hspe1Q64433 102 aaKnown RBP11.42□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ifi27l2aQ8R412 90 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Il1f10Q8R459 152 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Gm29666A0A087WQ99 126 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Gm45717A0A1B0GT68 152 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 P01802 115 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Foxi2Q3I5G5 311 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 AW146154Q3TPQ7 468 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Gm4861Q8C5A4 106 aa11.41□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Trav7d-3Q5R1I1 112 aa11.4□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Ndufa4Q62425 82 aaKnown RBP11.4□□□□□ -0.58
Clstn1-201ENSMUST00000039144 FlncQ8VHX6 2726 aaKnown RBP11.4□□□□□ -0.58
Clstn1-201ENSMUST00000039144 Trav3-4A0A075B654 114 aa11.4□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gm10521E9PZK0 135 aa11.4□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Hoxd3P09027 433 aa11.4□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Olfr313Q5NC55 308 aa11.4□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Ank2Q8C8R3 3898 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gm20730A0A075B5J6 119 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gm5629P06327 117 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Smrp1Q2MH31 260 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gemin7Q9CWY4 129 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Igkv20-101-2A0A0G2JDU3 113 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 GlrxQ9QUH0 107 aa11.39□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gm29423A0A087WRM1 55 aa11.38□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Q9DAQ5 155 aa11.38□□□□□ -0.59
Clstn1-201ENSMUST00000039144 OdaphJ3QNT8 126 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 F11rO88792 300 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 P01643 108 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Tex26Q0VB26 296 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Gm10135F6TEE5 83 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 NpwA0A1L1STR8 176 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 4930447F04RikA2AFR2 126 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 PkigO70139 76 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 P01747 120 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Cdx4Q07424 282 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Atp6v0e1Q9CQD8 81 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Ormdl2Q9CQZ0 153 aa11.37□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Znf740Q6NZQ6 180 aa11.36□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Cysltr1Q99JA4 352 aa11.36□□□□□ -0.59
Clstn1-201ENSMUST00000039144 Igkv4-57A0A0A6YYE7 117 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms