RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 C1qcQ02105 246 aa11.18□□□□□ -0.62
Nup54-201ENSMUST00000038514 Igkv4-62A0A0G2JDW9 117 aa11.17□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm6812B1AXU1 112 aa11.17□□□□□ -0.62
Nup54-201ENSMUST00000038514 BlcapP62951 87 aa11.17□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm28269A0A087WSG3 125 aa11.17□□□□□ -0.62
Nup54-201ENSMUST00000038514 NrepQ07475 68 aa11.17□□□□□ -0.62
Nup54-201ENSMUST00000038514 Cmya5Q70KF4 3739 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Trbv16A0A0B4J1H3 115 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Nat8b-psE0CYC6 232 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 F11rO88792 300 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Dido1Q8C9B9 2256 aaKnown RBP11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Gm20499D3Z4G5 72 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Bri3P28662 125 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Usmg5Q78IK2 58 aa11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 Prr3Q811B5 190 aaKnown RBP11.16□□□□□ -0.62
Nup54-201ENSMUST00000038514 P01643 108 aa11.15□□□□□ -0.62
Nup54-201ENSMUST00000038514 Hoxd3P09027 433 aa11.15□□□□□ -0.62
Nup54-201ENSMUST00000038514 3110018I06RikQ9CXS0 120 aa11.15□□□□□ -0.62
Nup54-201ENSMUST00000038514 Cspg4Q8VHY0 2327 aa11.15□□□□□ -0.63
Nup54-201ENSMUST00000038514 Gm10226O88253 85 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Q5BN45 167 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Dmrt3Q80WT2 476 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Tac4Q99N14 128 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Spata45Q9CVW4 97 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Gm17732E9Q5I2 61 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Pglyrp1O88593 182 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Cdip1Q9DB75 208 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Timm17aQ9Z0V8 171 aa11.14□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ighv1-5A0A0A6YWG2 117 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Mllt11P97783 90 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Il1f10Q8R459 152 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ighv1-63A0A075B5X2 117 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ighv1-12A0A0A6YXJ9 117 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Tmem262D3Z338 116 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 MsmbO08540 113 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 FcorP0DJI6 106 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 4930596D02RikQ3V0H9 216 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ash1lQ99MY8 2958 aa11.13□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ighv14-1A0A075B5R4 117 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 Klhdc1Q80YG3 406 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 Cryba4Q9JJV0 196 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 PspnO70300 156 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 Wfdc15aQ8BH89 80 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ankrd39Q9D2X0 183 aa11.12□□□□□ -0.63
Nup54-201ENSMUST00000038514 Clec5aQ9R007 190 aa11.11□□□□□ -0.63
Nup54-201ENSMUST00000038514 P01802 115 aa11.11□□□□□ -0.63
Nup54-201ENSMUST00000038514 PlaurP35456 327 aa11.11□□□□□ -0.63
Nup54-201ENSMUST00000038514 CenpeQ6RT24 2474 aaKnown RBP11.11□□□□□ -0.63
Nup54-201ENSMUST00000038514 CckP09240 115 aa11.1□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ighv1-85A0A075B5Y6 117 aa11.1□□□□□ -0.63
Nup54-201ENSMUST00000038514 NpwA0A1L1STR8 176 aa11.1□□□□□ -0.63
Nup54-201ENSMUST00000038514 AI854703Q8BIN3 203 aa11.1□□□□□ -0.63
Nup54-201ENSMUST00000038514 Cfc1P97766 202 aa11.09□□□□□ -0.63
Nup54-201ENSMUST00000038514 Higd1aQ9JLR9 95 aa11.09□□□□□ -0.63
Nup54-201ENSMUST00000038514 Ubr5Q80TP3 2792 aa11.09□□□□□ -0.63
Nup54-201ENSMUST00000038514 C920008G01RikA0A0B4J1N1 112 aa11.09□□□□□ -0.63
Nup54-201ENSMUST00000038514 LeprotO89013 131 aa11.09□□□□□ -0.63
Nup54-201ENSMUST00000038514 Gm45785A0A1B0GT05 94 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Mrpl35Q9CQL6 188 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Lelp1Q9DAE3 120 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Sptan1P16546 2472 aaKnown RBP11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm5819E9PZ96 154 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm28044L7N1X0 119 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm9961Q8BNV2 113 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Morn5Q9DAI9 170 aa11.08□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm10553J3QPF1 123 aa11.07□□□□□ -0.64
Nup54-201ENSMUST00000038514 P01726 129 aa11.07□□□□□ -0.64
Nup54-201ENSMUST00000038514 P06329 120 aa11.07□□□□□ -0.64
Nup54-201ENSMUST00000038514 Pip4p1Q3TWL2 284 aa11.07□□□□□ -0.64
Nup54-201ENSMUST00000038514 Rab37Q9JKM7 223 aa11.07□□□□□ -0.64
Nup54-201ENSMUST00000038514 Tmem263Q9DAM7 115 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Armcx4E9PWM3 2356 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Ighv2-3A0A075B696 115 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm21748Q3UE70 102 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Mpv17l2Q8VIK2 200 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Ttc28Q80XJ3 2450 aa11.06□□□□□ -0.64
Nup54-201ENSMUST00000038514 Ighv1-52A0A0A6YXC3 117 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Trbv17A0A140T8P8 114 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm37988J3QM41 62 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Cks1bP61025 79 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Fam216aQ9DB54 251 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm35549A0A0N4SUS7 141 aa11.05□□□□□ -0.64
Nup54-201ENSMUST00000038514 Krtap27-1E9PX37 202 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm933J3QPC1 141 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Runx1Q03347 451 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Atp5lQ9CPQ8 103 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Lect2O88803 151 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 P01811 117 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 TtrP07309 147 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Spag11Q8K4N2 71 aa11.04□□□□□ -0.64
Nup54-201ENSMUST00000038514 Svep1A2AVA0 3567 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Snrpd3P62320 126 aaKnown RBP11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 BC106179Q8C9L1 186 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Fam208bQ5DTT3 2382 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Gm17455G3UW87 128 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Fam19a4Q7TPG5 135 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Mfap4Q9D1H9 257 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 4930564D02RikQ9D4S4 103 aa11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Crip2Q9DCT8 208 aaKnown RBP11.03□□□□□ -0.64
Nup54-201ENSMUST00000038514 Phlda3Q9WV95 125 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 55.1 ms