RNA–Protein interactions for RNA: ENSMUST00000165375.2

Hoxc4-202, Transcript of Homeobox protein Hox-C4, mousemouse

TSL 1 (best) BASIC

Gene Hoxc4, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-202ENSMUST00000165375 Gm10352B2RWR6 380 aa12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm21693J3QK27 380 aa12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Rbmy1a1O35698 380 aa12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Tdgf1P51865 171 aa12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Srsf2Q62093 221 aaKnown RBP12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 AamdcQ8R0P4 122 aa12.86□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Ighv1-74A0A0G2JGK2 117 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Ndufa1O35683 70 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Chac1Q8R3J5 223 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Olfr1243Q8VGM7 305 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm45785A0A1B0GT05 94 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Esp3J3QN49 87 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Vamp8O70404 101 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 P01756 117 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 P01757 117 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Vmn1r63Q9EPT1 300 aa12.85□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Pdzd2E9Q1M1 2796 aa12.84□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Rnf185Q91YT2 192 aa12.84□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Trav8-1A0A075B641 109 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm5157A0A087WRH8 301 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm6525A0A0A6YW33 106 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm26661M0QWV4 156 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm9961Q8BNV2 113 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Prss29Q99MS4 279 aa12.83□□□□□ -0.35
Hoxc4-202ENSMUST00000165375 Gm28269A0A087WSG3 125 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Trav7-5A0A0G2JFX6 112 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Gm45717A0A1B0GT68 152 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Shisal2aA2A9G7 189 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Gm10521E9PZK0 135 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Smim1P0C8K7 78 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Anapc13Q8R034 74 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Crlf1Q9JM58 425 aa12.83□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Scgb1b24B1B0N6 92 aa12.82□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Gtsf1lQ9CWD0 151 aa12.82□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Lyg1Q9D7Q0 197 aa12.82□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Ankhd1E9PUR0 2548 aaKnown RBP12.82□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Znf580Q9DB38 172 aa12.82□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Gpx7Q99LJ6 186 aa12.81□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Scgb1b2O35176 93 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Tcl1b4P56844 120 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Spink13Q3UTS8 97 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Q9D131 166 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Cdip1Q9DB75 208 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Dusp14Q9JLY7 198 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Igkv4-90A0A075B5L3 117 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Ly86O88188 162 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 TctaQ8VEA7 122 aa12.8□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Igkv4-71A0A0G2JEH0 117 aa12.79□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Tcte2E9PY37 120 aa12.79□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Srp14P16254 110 aaKnown RBP12.79□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Arl3Q9WUL7 182 aa12.79□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Ccl6P27784 116 aa12.79□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Ang2Q64438 145 aa12.78□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 BC067074F6RXI4 2391 aa12.77□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 CrygbP04344 175 aa12.77□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Znf239P24399 201 aa12.77□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 SNORCQ9CXL7 121 aa12.77□□□□□ -0.36
Hoxc4-202ENSMUST00000165375 Gm10036E9PYL9 178 aaKnown RBP12.77□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Sertad4A7DTG3 377 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 P06334 169 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Olfr553Q7TRS6 326 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Spock3Q8BKV0 436 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Helz2E9QAM5 2947 aaKnown RBP12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Socs3O35718 225 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 P01812 117 aa12.76□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Rif1Q6PR54 2419 aaKnown RBP12.75□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 A730046J19RikA0A1B0GSN8 89 aa12.75□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 KprpB2RUR4 657 aa12.75□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 P06330 118 aa12.75□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 BsnO88737 3942 aa12.75□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Bri3P28662 125 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Vsig8Q6P3A4 417 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ovol2Q8CIV7 274 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Tenm3Q9WTS6 2715 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Epg5Q80TA9 2572 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Gm28038F7BCN9 126 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ndufa4l2Q4FZG9 87 aa12.74□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Nf1Q04690 2841 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Defa3P28310 93 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Defa10P50708 93 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Defa15P50713 93 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Smrp1Q2MH31 260 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Khdc1aQ3UWR2 166 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Defb45Q3V490 66 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Pgpep1Q9ESW8 209 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Trav9d-1A0A075B699 112 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ighv8-5A0A0A6YY60 119 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 1520401A03RikA0A0J9YVH6 598 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 P01794 123 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ube2e2Q91W82 201 aa12.73□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ighv1-23A0A0A6YVW3 117 aa12.72□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Gm10295Q8CCF3 114 aa12.72□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Tspan13Q9D8C2 204 aa12.72□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Trav6-4A0A075B6B4 115 aa12.71□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 NrepQ07475 68 aa12.71□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Tmem213Q08EA8 116 aa12.71□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 AY761184Q9D848 116 aa12.71□□□□□ -0.37
Hoxc4-202ENSMUST00000165375 Ighv7-4A0A0A6YXL5 121 aa12.71□□□□□ -0.38
Hoxc4-202ENSMUST00000165375 Gm21370Q3T9V6 190 aa12.71□□□□□ -0.38
Hoxc4-202ENSMUST00000165375 Snai3Q9QY31 287 aa12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 61.9 ms