RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 NpsP0C0P8 89 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Olfr311Q5NC59 308 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Cox17P56394 63 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Gm20730A0A075B5J6 119 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 P01649 108 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 4930415O20RikQ8CDT5 131 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Foxc1Q61572 553 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Lmo1Q924W9 156 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Ucn2Q99ML8 113 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Rspo3Q2TJ95 277 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Cd300eQ8K249 196 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Mapk1ip1lQ8BH93 242 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Nop10Q9CQS2 64 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Hrct1Q9D6B9 109 aa9.48□□□□□ -0.89
Trim56-201ENSMUST00000054384 Igf2rQ07113 2483 aaKnown RBP9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Lyrm9Q3UN90 78 aa9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Wdr90Q6ZPG2 1874 aa9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Prop1P97458 223 aa9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Col24a1Q30D77 1733 aa9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Rbmy1bQ60990 380 aa9.47□□□□□ -0.89
Trim56-201ENSMUST00000054384 Ighv6-7A0A0A6YWU3 119 aa9.46□□□□□ -0.89
Trim56-201ENSMUST00000054384 A0A1L1SR50 188 aa9.46□□□□□ -0.89
Trim56-201ENSMUST00000054384 Ighv1-4A0A075B5T4 117 aa9.46□□□□□ -0.89
Trim56-201ENSMUST00000054384 Cspg4Q8VHY0 2327 aa9.46□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm10762Q9CZN6 115 aa9.46□□□□□ -0.9
Trim56-201ENSMUST00000054384 Pglyrp1O88593 182 aa9.46□□□□□ -0.9
Trim56-201ENSMUST00000054384 Zfp36P22893 319 aaKnown RBP9.46□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm17455G3UW87 128 aa9.46□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm5941Q497P9 117 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Fam241bQ9D882 120 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Igkv8-18A0A0B4J1J3 123 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 P01793 123 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm4861Q8C5A4 106 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Them7Q9DCP4 223 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Mbd6Q3TY92 1003 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Fam216bQ8CC14 138 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Lst1O08843 95 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Prp2P05143 317 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 MifP34884 115 aaKnown RBP9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 C730034F03RikQ8BGL5 111 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Cysrt1Q9D1E4 142 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Tpsg1Q9QUL7 311 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv5-8A0A075B676 92 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Defb47Q30KN1 79 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv13-2A0A0A6YWN3 119 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 P01756 117 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 P01757 117 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 PemtQ61907 199 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 Bub3Q9WVA3 326 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 PtprbB2RU80 1998 aa9.45□□□□□ -0.9
Trim56-201ENSMUST00000054384 AmelxP63277 210 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 SptssbQ925E8 76 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv8-8A0A0A6YXQ0 119 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm10251J3QPM5 127 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm2916Q9D9B9 127 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 P01794 123 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ang4Q3TMQ6 144 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Foxf1Q61080 378 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Spg11Q3UHA3 2430 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Zfp36l1P23950 338 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Znrf2Q71FD5 238 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv1-74A0A0G2JGK2 117 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Egr2P08152 470 aa9.44□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv1-64A0A075B5X3 117 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm9936Q8C864 160 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm9961Q8BNV2 113 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ociad2Q9D8W7 154 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Acyp1P56376 99 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Igkv5-37A0A140T8N4 115 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Trav4-3A0A0B4J1K1 110 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Igkv3-5A0A140T8M6 119 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm10881P01642 115 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 P01791 123 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Cd24P24807 76 aa9.43□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv1-50A0A075B5W1 117 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 9930022D16RikQ8BG27 128 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Trav6-6A0A075B603 114 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Trav12-3A0A075B648 115 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Rnf144bQ8BKD6 301 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm11733Q8BQP1 125 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Wfdc2Q9DAU7 174 aa9.42□□□□□ -0.9
Trim56-201ENSMUST00000054384 Fam222aQ6PGH4 453 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Pom121l2Q5SW25 972 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Spink4O35679 86 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Mrps12O35680 139 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Zic4Q61467 341 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Trav6n-6A0A075B6B2 114 aa9.41□□□□□ -0.9
Trim56-201ENSMUST00000054384 Thsd7bQ6P4U0 1607 aa9.4□□□□□ -0.9
Trim56-201ENSMUST00000054384 Prh1P05142 261 aa9.4□□□□□ -0.9
Trim56-201ENSMUST00000054384 Gm12253Q5NC48 229 aa9.4□□□□□ -0.9
Trim56-201ENSMUST00000054384 Ighv3-6P18531 116 aa9.4□□□□□ -0.9
Trim56-201ENSMUST00000054384 Zmat4Q8BZ94 229 aa9.4□□□□□ -0.9
Trim56-201ENSMUST00000054384 Tnfrsf23Q9ER63 176 aa9.4□□□□□ -0.91
Trim56-201ENSMUST00000054384 PrcdQ00LT2 53 aa9.4□□□□□ -0.91
Trim56-201ENSMUST00000054384 Tm2d2Q8R0I4 213 aa9.4□□□□□ -0.91
Trim56-201ENSMUST00000054384 Foxs1Q61574 329 aa9.39□□□□□ -0.91
Trim56-201ENSMUST00000054384 Cox7b2Q9D2H1 82 aa9.39□□□□□ -0.91
Trim56-201ENSMUST00000054384 Clec4b2Q67DU8 208 aa9.39□□□□□ -0.91
Trim56-201ENSMUST00000054384 Ighv1-19A0A0A6YWX0 117 aa9.39□□□□□ -0.91
Trim56-201ENSMUST00000054384 Gm12353A2AGJ4 60 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 87.3 ms