RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Smim26Q3V460 107 aa12.94□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gatd1Q8BFQ8 220 aa12.94□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Tcf20Q9EPQ8 1987 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Xcl1P47993 114 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Morn5Q9DAI9 170 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Trav6-6A0A075B603 114 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Igkv4-59A0A0B4J1I8 117 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Igkv4-61A0A0G2JH00 117 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Nsun4C4P6S0 806 aaKnown RBP12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Lyrm9Q3UN90 78 aa12.93□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Cox17P56394 63 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Pcp4P63054 62 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Igkv4-53A0A0G2JFC6 119 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gm15128A2ADW8 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gm15093A2BI72 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Luzp4B1AV09 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gm15107B1B0X0 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gm15097E9QA14 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 GfyJ3KML8 504 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 P04944 107 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Gm15085Q62012 449 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 BC048502Q80Y74 154 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Parp4E9PYK3 1969 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Prop1P97458 223 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Ss18l2Q9D174 77 aa12.92□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Lgals4Q8K419 326 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Piezo1E2JF22 2547 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Trav9-2A0A075B647 113 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Trav9-4A0A0B4J1K2 113 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 9130230L23RikQ8CC80 163 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Ccl25O35903 144 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Col8a2P25318 699 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Pla2g2aP31482 146 aa12.91□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Lage3Q9CR70 148 aa12.9□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 P01756 117 aa12.9□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 P01757 117 aa12.9□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Nop10Q9CQS2 64 aa12.9□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Trav9d-4A0A0G2JG37 103 aa12.9□□□□□ -0.34
Ubfd1-201ENSMUST00000033158 Defb18Q30KP5 85 aa12.9□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Gm15294V9GXA7 121 aa12.9□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Arhgef17Q80U35 2057 aa12.89□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 A0A286YE02 88 aa12.89□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Gm15127B1AVZ5 449 aa12.89□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 P01753 117 aa12.89□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Gm9949Q8C9F4 104 aa12.89□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Crip1P63254 77 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Trav14d-3-dv8A0A075B619 120 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 IgipA0A1B0GR74 53 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Znrf2Q71FD5 238 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Ndufa3Q9CQ91 84 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Ighv3-1A0A075B5S6 116 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Hoxb4P10284 250 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Mpv17l2Q8VIK2 200 aa12.88□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Nav2E9Q842 2432 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Spink12Q9D256 87 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Arhgap21Q6DFV3 1944 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 OtoglF7A4A7 2325 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Trav3-4A0A075B654 114 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Trav9n-2A0A0G2JDP3 113 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 P01658 132 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Crlf1Q9JM58 425 aa12.87□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Igkv4-72A0A0B4J1I4 117 aa12.86□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Gm15557A6PWY0 234 aa12.86□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Runx1Q03347 451 aa12.86□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 4930415O20RikQ8CDT5 131 aa12.86□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Ndufa12Q7TMF3 145 aaKnown RBP12.85□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Trav9d-3A0A075B695 113 aa12.85□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Fam24aQ8CF27 98 aa12.85□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Igkv4-54A0A0G2JES9 117 aa12.85□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Odf1Q61999 247 aa12.85□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Rmi2Q3UPE3 149 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Ubl5Q9EPV8 73 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Prp2P05143 317 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 1500011B03RikQ3TTH7 73 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Prr12E9PYL2 2035 aaKnown RBP12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Hoxd3P09027 433 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Ndufb4Q9CQC7 129 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Fam241bQ9D882 120 aa12.84□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Fam240bJ3QMB3 78 aa12.83□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 BC048562Q80ZQ7 204 aa12.83□□□□□ -0.35
Ubfd1-201ENSMUST00000033158 Col4a6B1AVK5 1691 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Tet1Q3URK3 2007 aaKnown RBP12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Clec4b2Q67DU8 208 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Wfdc2Q9DAU7 174 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Mlst8Q9DCJ1 326 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Cd99Q8VCN6 175 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Oxld1Q9CR10 201 aa12.83□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Gm20730A0A075B5J6 119 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Dand5Q76LW6 185 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Spata25Q9DA57 226 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Znf672Q99LH4 468 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Wfdc15bQ9JHY4 80 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Igkv4-79A0A075B5L8 119 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Defb29Q8BGW9 78 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Q99M08 65 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Bex1Q9R224 128 aa12.82□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 NpsP0C0P8 89 aa12.81□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 7420426K07RikQ3UX66 186 aa12.81□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Alms1Q8K4E0 3251 aa12.8□□□□□ -0.36
Ubfd1-201ENSMUST00000033158 Trbv13-1A0A0B4J1P8 112 aa12.8□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 68 ms