RNA–Protein interactions for RNA: YOR159C

SME1, Transcript of Core Sm protein Sm E, yeast

Gene SME1, Length 285 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SME1	YOR159C	PCL8	Q08966	492 aa		4.26	□□□□□ -1.73
SME1	YOR159C	RPO21	P04050	1733 aa	Known RBP	4.26	□□□□□ -1.73
SME1	YOR159C	MRPL9	P31334	269 aa		4.25	□□□□□ -1.73
SME1	YOR159C	HEM12	P32347	362 aa	Predicted RBP	4.25	□□□□□ -1.73
SME1	YOR159C	RPC34	P32910	317 aa		4.25	□□□□□ -1.73
SME1	YOR159C	PAF1	P38351	445 aa		4.25	□□□□□ -1.73
SME1	YOR159C	BST1	P43571	1029 aa		4.25	□□□□□ -1.73
SME1	YOR159C	PHM6	Q05637	104 aa		4.25	□□□□□ -1.73
SME1	YOR159C	HOS1	Q12214	470 aa		4.25	□□□□□ -1.73
SME1	YOR159C	BET2	P20133	325 aa		4.24	□□□□□ -1.73
SME1	YOR159C	MRC1	P25588	1096 aa		4.24	□□□□□ -1.73
SME1	YOR159C	DSS4	P32601	143 aa		4.24	□□□□□ -1.73
SME1	YOR159C	CCL1	P37366	393 aa		4.24	□□□□□ -1.73
SME1	YOR159C	STL1	P39932	569 aa		4.24	□□□□□ -1.73
SME1	YOR159C	BPL1	P48445	690 aa	Predicted RBP	4.24	□□□□□ -1.73
SME1	YOR159C	SCS3	P53012	380 aa		4.24	□□□□□ -1.73
SME1	YOR159C	MNT2	P53059	558 aa		4.24	□□□□□ -1.73
SME1	YOR159C	FOL1	P53848	824 aa		4.24	□□□□□ -1.73
SME1	YOR159C	USA1	Q03714	838 aa		4.24	□□□□□ -1.73
SME1	YOR159C	PLC1	P32383	869 aa		4.23	□□□□□ -1.73
SME1	YOR159C	NMD5	P46970	1048 aa		4.23	□□□□□ -1.73
SME1	YOR159C	RSC9	Q03124	581 aa		4.23	□□□□□ -1.73
SME1	YOR159C	IRC3	Q06683	689 aa		4.23	□□□□□ -1.73
SME1	YOR159C	ENP1	P38333	483 aa	Known RBP	4.22	□□□□□ -1.73
SME1	YOR159C	WAR1	Q03631	944 aa		4.22	□□□□□ -1.73
SME1	YOR159C	YLR111W	Q12528	110 aa		4.22	□□□□□ -1.73
SME1	YOR159C	YMR084W	A2P2R3	262 aa		4.21	□□□□□ -1.74
SME1	YOR159C	ARG1	P22768	420 aa		4.21	□□□□□ -1.74
SME1	YOR159C	PET309	P32522	965 aa	Predicted RBP	4.21	□□□□□ -1.74
SME1	YOR159C	SSP120	P39931	234 aa	Known RBP	4.21	□□□□□ -1.74
SME1	YOR159C	YIL092W	P40497	633 aa		4.21	□□□□□ -1.74
SME1	YOR159C	SLX4	Q12098	748 aa		4.21	□□□□□ -1.74
SME1	YOR159C	PSF3	Q12146	194 aa		4.21	□□□□□ -1.74
SME1	YOR159C	MMS22	Q06164	1454 aa		4.2	□□□□□ -1.74
SME1	YOR159C	URA3	P03962	267 aa		4.2	□□□□□ -1.74
SME1	YOR159C	YPK1	P12688	680 aa	Known RBP	4.2	□□□□□ -1.74
SME1	YOR159C	BSP1	Q06604	576 aa		4.2	□□□□□ -1.74
SME1	YOR159C	RTK1	Q12100	620 aa	Predicted RBP	4.2	□□□□□ -1.74
SME1	YOR159C	ULS1	Q08562	1619 aa		4.2	□□□□□ -1.74
SME1	YOR159C	GDB1	Q06625	1536 aa		4.2	□□□□□ -1.74
SME1	YOR159C	URE2	P23202	354 aa	Known RBP	4.19	□□□□□ -1.74
SME1	YOR159C	PHO3	P24031	467 aa		4.19	□□□□□ -1.74
SME1	YOR159C	GSY2	P27472	705 aa		4.19	□□□□□ -1.74
SME1	YOR159C	SAW1	P39735	261 aa		4.19	□□□□□ -1.74
SME1	YOR159C	OPT1	P40897	799 aa		4.19	□□□□□ -1.74
SME1	YOR159C	TDA10	P42938	290 aa		4.19	□□□□□ -1.74
SME1	YOR159C	SAE2	P46946	345 aa		4.19	□□□□□ -1.74
SME1	YOR159C	YNR071C	P53757	342 aa		4.19	□□□□□ -1.74
SME1	YOR159C	ERG13	P54839	491 aa	Known RBP	4.19	□□□□□ -1.74
SME1	YOR159C	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
SME1	YOR159C	AAC1	P04710	309 aa		4.18	□□□□□ -1.74
SME1	YOR159C	YJU2	P28320	278 aa	Predicted RBP	4.18	□□□□□ -1.74
SME1	YOR159C	TAF5	P38129	798 aa		4.18	□□□□□ -1.74
SME1	YOR159C	APD1	P38281	316 aa		4.18	□□□□□ -1.74
SME1	YOR159C	STB5	P38699	743 aa		4.18	□□□□□ -1.74
SME1	YOR159C	MAD2	P40958	196 aa		4.18	□□□□□ -1.74
SME1	YOR159C	SNO3	P43544	222 aa		4.18	□□□□□ -1.74
SME1	YOR159C	YPL068C	Q02749	293 aa		4.18	□□□□□ -1.74
SME1	YOR159C	NUR1	Q12066	484 aa		4.18	□□□□□ -1.74
SME1	YOR159C	RDL1	Q12305	139 aa	Known RBP	4.18	□□□□□ -1.74
SME1	YOR159C	SPP41	P38904	1435 aa		4.18	□□□□□ -1.74
SME1	YOR159C	YMR085W	P0CF18	432 aa		4.17	□□□□□ -1.74
SME1	YOR159C	CBP3	P21560	335 aa		4.17	□□□□□ -1.74
SME1	YOR159C	SDS22	P36047	338 aa		4.17	□□□□□ -1.74
SME1	YOR159C	GSM1	P42950	618 aa		4.17	□□□□□ -1.74
SME1	YOR159C	YNL092W	P53934	400 aa		4.17	□□□□□ -1.74
SME1	YOR159C	CRT10	Q08226	957 aa		4.17	□□□□□ -1.74
SME1	YOR159C	DIN7	Q12086	430 aa		4.17	□□□□□ -1.74
SME1	YOR159C	AHA1	Q12449	350 aa	Known RBP	4.17	□□□□□ -1.74
SME1	YOR159C	TRM3	Q07527	1436 aa		4.16	□□□□□ -1.74
SME1	YOR159C	YAP1	P19880	650 aa	Known RBP	4.16	□□□□□ -1.74
SME1	YOR159C	CDC5	P32562	705 aa		4.16	□□□□□ -1.74
SME1	YOR159C	TGL1	P34163	548 aa		4.16	□□□□□ -1.74
SME1	YOR159C	SDH8	P38345	138 aa		4.16	□□□□□ -1.74
SME1	YOR159C	LNP1	P38878	278 aa		4.16	□□□□□ -1.74
SME1	YOR159C	IDS2	P46958	469 aa		4.16	□□□□□ -1.74
SME1	YOR159C	COS12	P53053	380 aa		4.16	□□□□□ -1.74
SME1	YOR159C	DBP10	Q12389	995 aa	Known RBP	4.16	□□□□□ -1.74
SME1	YOR159C	CTT1	P06115	562 aa		4.15	□□□□□ -1.75
SME1	YOR159C	VAS1	P07806	1104 aa	Known RBP	4.15	□□□□□ -1.75
SME1	YOR159C	GDA1	P32621	518 aa		4.15	□□□□□ -1.75
SME1	YOR159C	MTG2	P38860	518 aa		4.15	□□□□□ -1.75
SME1	YOR159C	SCS2	P40075	244 aa	Known RBP	4.15	□□□□□ -1.75
SME1	YOR159C	TRI1	Q05024	226 aa		4.15	□□□□□ -1.75
SME1	YOR159C	HRD3	Q05787	833 aa		4.15	□□□□□ -1.75
SME1	YOR159C	CYK3	Q07533	885 aa		4.15	□□□□□ -1.75
SME1	YOR159C	CRC1	Q12289	327 aa		4.15	□□□□□ -1.75
SME1	YOR159C	VFA1	P40080	203 aa		4.14	□□□□□ -1.75
SME1	YOR159C	CNM67	P53865	581 aa	Known RBP	4.14	□□□□□ -1.75
SME1	YOR159C	IDP3	P53982	420 aa	Known RBP	4.14	□□□□□ -1.75
SME1	YOR159C	YPL071C	Q02864	156 aa		4.14	□□□□□ -1.75
SME1	YOR159C	SND1	Q04007	877 aa		4.14	□□□□□ -1.75
SME1	YOR159C	TPO3	Q06451	622 aa		4.14	□□□□□ -1.75
SME1	YOR159C	SPN1	Q06505	410 aa	Predicted RBP	4.14	□□□□□ -1.75
SME1	YOR159C	CHC1	P22137	1653 aa	Known RBP	4.13	□□□□□ -1.75
SME1	YOR159C	BI2	P03873	423 aa		4.13	□□□□□ -1.75
SME1	YOR159C	RRP8	P38961	392 aa	Known RBP	4.13	□□□□□ -1.75
SME1	YOR159C	MNT3	P40549	630 aa		4.13	□□□□□ -1.75
SME1	YOR159C	IRC8	P47046	822 aa		4.13	□□□□□ -1.75
SME1	YOR159C	ASK10	P48361	1146 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms