RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	MRPL36	P36531	177 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	FOL2	P51601	243 aa	Known RBP	4.13	□□□□□ -1.75
DSL1	YNL258C	VPS4	P52917	437 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	SNO2	P53823	222 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	ATG21	Q02887	496 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	CTK1	Q03957	528 aa	Known RBP	4.13	□□□□□ -1.75
DSL1	YNL258C	YLR352W	Q06479	807 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	ACK1	Q07622	623 aa	Predicted RBP	4.13	□□□□□ -1.75
DSL1	YNL258C	TRM13	Q12383	476 aa		4.13	□□□□□ -1.75
DSL1	YNL258C	NAT1	P12945	854 aa	Known RBP	4.12	□□□□□ -1.75
DSL1	YNL258C	TPM1	P17536	199 aa	Known RBP	4.12	□□□□□ -1.75
DSL1	YNL258C	MRPL7	P36519	292 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
DSL1	YNL258C	YEL057C	P39983	233 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	TMN3	P40071	706 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	KHA1	P40309	873 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	REG1	Q00816	1014 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	MUB1	Q03162	620 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	IZH3	Q07959	543 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	AIM41	Q12032	185 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	SPE4	Q12455	300 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	CPA2	P03965	1118 aa	Known RBP	4.12	□□□□□ -1.75
DSL1	YNL258C	SIR3	P06701	978 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	URK1	P27515	501 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	TFC3	P34111	1160 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	YJL193W	P39542	402 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	IST3	P40565	148 aa	Predicted RBP	4.12	□□□□□ -1.75
DSL1	YNL258C	FKH2	P41813	862 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	DSD1	P53095	428 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	MRPL22	P53881	309 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	RPS15	Q01855	142 aa	Known RBP	4.12	□□□□□ -1.75
DSL1	YNL258C	RAD30	Q04049	632 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	CTI6	Q08923	506 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	ZRT2	Q12436	422 aa		4.12	□□□□□ -1.75
DSL1	YNL258C	BYE1	P36106	594 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	FLC2	P39719	783 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	YMR155W	Q03795	547 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	HOF1	Q05080	669 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	RXT3	Q07458	294 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	TMA16	Q08687	178 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	CHS5	Q12114	671 aa	Known RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	RTN2	Q12443	393 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	YOL159C-A	Q3E769	90 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	ISN1	Q99312	450 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	GCN4	P03069	281 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	TRP4	P07285	380 aa	Predicted RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	YML003W	P0CF16	290 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	CDC24	P11433	854 aa	Predicted RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	RED1	P14291	827 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	PDX1	P16451	410 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	FUR1	P18562	216 aa	Known RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	CCT6	P39079	546 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	LYS4	P49367	693 aa	Predicted RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	IMO32	P53219	342 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	FHN1	P53279	174 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	SNF12	P53628	566 aa		4.11	□□□□□ -1.75
DSL1	YNL258C	DIA2	Q08496	732 aa	Predicted RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	PNO1	Q99216	274 aa	Known RBP	4.11	□□□□□ -1.75
DSL1	YNL258C	ATP2	P00830	511 aa	Known RBP	4.1	□□□□□ -1.75
DSL1	YNL258C	VPS34	P22543	875 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	PRP28	P23394	588 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	ZAP1	P47043	880 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	UBC11	P52492	156 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	ZDS2	P54786	942 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	IRC3	Q06683	689 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	ENB1	Q08299	606 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	SKM1	Q12469	655 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
DSL1	YNL258C	CAP1	P28495	268 aa	Known RBP	4.1	□□□□□ -1.75
DSL1	YNL258C	DSS4	P32601	143 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	SLZ1	P40167	298 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	MPS3	P47069	682 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	JJJ1	P53863	590 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	EFR3	Q03653	782 aa	Known RBP	4.1	□□□□□ -1.75
DSL1	YNL258C	ECM22	Q05958	814 aa	Predicted RBP	4.1	□□□□□ -1.75
DSL1	YNL258C	RIX7	Q07844	837 aa	Known RBP	4.1	□□□□□ -1.75
DSL1	YNL258C	ESC8	Q08119	714 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	MLH3	Q12083	715 aa		4.1	□□□□□ -1.75
DSL1	YNL258C	YLR302C	O13544	120 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	YSP3	P25036	478 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	LCB1	P25045	558 aa	Known RBP	4.09	□□□□□ -1.75
DSL1	YNL258C	EFT1	P32324	842 aa	Known RBP	4.09	□□□□□ -1.75
DSL1	YNL258C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	RIP-Chip
DSL1	YNL258C	ALY1	P36117	915 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	YPT10	P38146	199 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	SRO77	P38163	1010 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	TDP1	P38319	544 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	YEL025C	P39991	1188 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	YIR042C	P40586	236 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	AMA1	P50082	593 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	PAN2	P53010	1115 aa	Predicted RBP	4.09	□□□□□ -1.75
DSL1	YNL258C	RPC11	Q04307	110 aa	Predicted RBP	4.09	□□□□□ -1.75
DSL1	YNL258C	Q0010	Q9ZZX9	128 aa		4.09	□□□□□ -1.75
DSL1	YNL258C	ARO9	P38840	513 aa	Predicted RBP	4.09	□□□□□ -1.76
DSL1	YNL258C	MUP1	P50276	574 aa		4.09	□□□□□ -1.76
DSL1	YNL258C	YGR016W	P53209	190 aa		4.09	□□□□□ -1.76
DSL1	YNL258C	MED7	Q08278	222 aa		4.09	□□□□□ -1.76
DSL1	YNL258C	YBR126W-A	Q8TGU7	68 aa		4.09	□□□□□ -1.76
DSL1	YNL258C	YOR111W	Q99210	232 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms