RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YDR018CQ12185 396 aa3.92□□□□□ -1.78
ECM16YMR128W MDM20Q12387 796 aaKnown RBP3.92□□□□□ -1.78
ECM16YMR128W SRD1P09007 221 aa3.91□□□□□ -1.78
ECM16YMR128W PCK1P10963 549 aa3.91□□□□□ -1.78
ECM16YMR128W CDC42P19073 191 aa3.91□□□□□ -1.78
ECM16YMR128W MRE11P32829 692 aa3.91□□□□□ -1.78
ECM16YMR128W RIB7P33312 244 aa3.91□□□□□ -1.78
ECM16YMR128W ASH1P34233 588 aa3.91□□□□□ -1.78
ECM16YMR128W MGS1P40151 587 aa3.91□□□□□ -1.78
ECM16YMR128W GCN20P43535 752 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W SHE10P53075 577 aa3.91□□□□□ -1.78
ECM16YMR128W RPL22BP56628 122 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W KRE28Q04431 385 aa3.91□□□□□ -1.78
ECM16YMR128W UBX5Q06682 500 aa3.91□□□□□ -1.78
ECM16YMR128W FLC1Q08967 793 aa3.91□□□□□ -1.78
ECM16YMR128W RUP1Q12242 671 aa3.91□□□□□ -1.78
ECM16YMR128W TY1A-BLQ12266 440 aa3.91□□□□□ -1.78
ECM16YMR128W PHO8P11491 566 aa3.91□□□□□ -1.78
ECM16YMR128W HEM12P32347 362 aaPredicted RBP3.91□□□□□ -1.78
ECM16YMR128W YKR078WP36158 585 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W TSC10P38342 320 aa3.91□□□□□ -1.78
ECM16YMR128W PIK1P39104 1066 aa3.91□□□□□ -1.78
ECM16YMR128W SPC72P39723 622 aa3.91□□□□□ -1.78
ECM16YMR128W RPN3P40016 523 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W PRK1P40494 810 aa3.91□□□□□ -1.78
ECM16YMR128W RBL2P48606 106 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W YML6P51998 286 aa3.91□□□□□ -1.78
ECM16YMR128W UTP22P53254 1237 aaPredicted RBP3.91□□□□□ -1.78
ECM16YMR128W SXM1Q04175 944 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W MCD1Q12158 566 aa3.91□□□□□ -1.78
ECM16YMR128W NTO1Q12311 748 aa3.91□□□□□ -1.78
ECM16YMR128W YLR278CQ05854 1341 aa3.91□□□□□ -1.78
ECM16YMR128W ADE3P07245 946 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W EXO70P19658 623 aa3.91□□□□□ -1.78
ECM16YMR128W SEC21P32074 935 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W TMT1P32643 299 aa3.91□□□□□ -1.78
ECM16YMR128W COY1P34237 679 aa3.91□□□□□ -1.78
ECM16YMR128W SET3P36124 751 aa3.91□□□□□ -1.78
ECM16YMR128W LSB1P53281 241 aa3.91□□□□□ -1.78
ECM16YMR128W DAK1P54838 584 aaKnown RBP3.91□□□□□ -1.78
ECM16YMR128W APC9Q12107 265 aa3.91□□□□□ -1.78
ECM16YMR128W CDC4P07834 779 aa3.9□□□□□ -1.78
ECM16YMR128W ILS1P09436 1072 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W MSS116P15424 664 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W ADE2P21264 571 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W HXT3P32466 567 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W YSC83P32792 385 aa3.9□□□□□ -1.78
ECM16YMR128W CSG2P35206 410 aa3.9□□□□□ -1.78
ECM16YMR128W YKL151CP36059 337 aa3.9□□□□□ -1.78
ECM16YMR128W STV1P37296 890 aa3.9□□□□□ -1.78
ECM16YMR128W YBL028CP38202 106 aa3.9□□□□□ -1.78
ECM16YMR128W FLC2P39719 783 aa3.9□□□□□ -1.78
ECM16YMR128W KHA1P40309 873 aa3.9□□□□□ -1.78
ECM16YMR128W AIM21P40563 679 aa3.9□□□□□ -1.78
ECM16YMR128W YJL171CP46992 396 aa3.9□□□□□ -1.78
ECM16YMR128W BNA3P47039 444 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W MTC3P53077 123 aa3.9□□□□□ -1.78
ECM16YMR128W PUS2P53167 370 aa3.9□□□□□ -1.78
ECM16YMR128W TIF35Q04067 274 aaKnown RBP3.9□□□□□ -1.78
ECM16YMR128W TOP3P13099 656 aa3.9□□□□□ -1.79
ECM16YMR128W ADP1P25371 1049 aa3.9□□□□□ -1.79
ECM16YMR128W KAR4P25583 335 aa3.9□□□□□ -1.79
ECM16YMR128W RPC82P32349 654 aa3.9□□□□□ -1.79
ECM16YMR128W BCS1P32839 456 aa3.9□□□□□ -1.79
ECM16YMR128W SHP1P34223 423 aa3.9□□□□□ -1.79
ECM16YMR128W VBA5P36172 582 aa3.9□□□□□ -1.79
ECM16YMR128W STL1P39932 569 aa3.9□□□□□ -1.79
ECM16YMR128W HSH155P49955 971 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W CFT2Q12102 859 aaPredicted RBP3.9□□□□□ -1.79
ECM16YMR128W PSF3Q12146 194 aa3.9□□□□□ -1.79
ECM16YMR128W NFI1Q12216 726 aa3.9□□□□□ -1.79
ECM16YMR128W TAL1P15019 335 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W CLN1P20437 546 aa3.9□□□□□ -1.79
ECM16YMR128W PWP2P25635 923 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W CUE2P36075 443 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W NEM1P38757 446 aa3.9□□□□□ -1.79
ECM16YMR128W SAW1P39735 261 aa3.9□□□□□ -1.79
ECM16YMR128W SSP120P39931 234 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W NOP9P47077 666 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W YJR124CP47159 448 aa3.9□□□□□ -1.79
ECM16YMR128W COS5P47187 383 aa3.9□□□□□ -1.79
ECM16YMR128W SIW14P53965 281 aa3.9□□□□□ -1.79
ECM16YMR128W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
ECM16YMR128W RPN8Q08723 338 aaKnown RBP3.9□□□□□ -1.79
ECM16YMR128W RTT10Q08924 1013 aa3.9□□□□□ -1.79
ECM16YMR128W PGK1P00560 416 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W ATP2P00830 511 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W HTS1P07263 546 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W MSD1P15179 658 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W ABD1P32783 436 aaPredicted RBP3.89□□□□□ -1.79
ECM16YMR128W SEC6P32844 805 aa3.89□□□□□ -1.79
ECM16YMR128W SEG2P34250 1132 aa3.89□□□□□ -1.79
ECM16YMR128W PCA1P38360 1216 aa3.89□□□□□ -1.79
ECM16YMR128W STB1P42845 420 aa3.89□□□□□ -1.79
ECM16YMR128W YJL049WP47048 450 aa3.89□□□□□ -1.79
ECM16YMR128W TAH11P47112 604 aa3.89□□□□□ -1.79
ECM16YMR128W YTP1P53584 459 aa3.89□□□□□ -1.79
ECM16YMR128W ELP3Q02908 557 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W SVL3Q03088 825 aaKnown RBP3.89□□□□□ -1.79
ECM16YMR128W YMR160WQ03823 816 aa3.89□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms