RNA–Protein interactions for RNA: YHR150W

PEX28, Transcript of Peroxisomal integral membrane peroxin, yeastyeast

Gene PEX28, Length 1,740 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX28YHR150W FMP25Q08023 583 aa7.66□□□□□ -1.18
PEX28YHR150W SNX3Q08826 162 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W APC9Q12107 265 aa7.66□□□□□ -1.18
PEX28YHR150W IZH4Q99393 312 aa7.66□□□□□ -1.18
PEX28YHR150W AI5_ALPHAQ9ZZX1 630 aa7.66□□□□□ -1.18
PEX28YHR150W GID7P25569 745 aa7.66□□□□□ -1.18
PEX28YHR150W YHL026CP38740 315 aa7.66□□□□□ -1.18
PEX28YHR150W NMD3P38861 518 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W LYS9P38999 446 aa7.66□□□□□ -1.18
PEX28YHR150W AFG3P39925 761 aa7.66□□□□□ -1.18
PEX28YHR150W DSE1P40077 573 aa7.66□□□□□ -1.18
PEX28YHR150W MGS1P40151 587 aa7.66□□□□□ -1.18
PEX28YHR150W DIM1P41819 318 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W TAN1P53072 289 aaPredicted RBP7.66□□□□□ -1.18
PEX28YHR150W IST1P53843 298 aaPredicted RBP7.66□□□□□ -1.18
PEX28YHR150W ULP1Q02724 621 aa7.66□□□□□ -1.18
PEX28YHR150W AAD15Q08361 143 aa7.66□□□□□ -1.18
PEX28YHR150W TMA46Q12000 345 aaKnown RBP7.66□□□□□ -1.18
PEX28YHR150W RRP36Q12481 300 aaPredicted RBP7.66□□□□□ -1.18
PEX28YHR150W KCS1Q12494 1050 aa7.66□□□□□ -1.18
PEX28YHR150W YEL077CQ3E7X8 1277 aa7.66□□□□□ -1.18
PEX28YHR150W PRP6P19735 899 aaPredicted RBP7.65□□□□□ -1.18
PEX28YHR150W YAP1801P38856 637 aa7.65□□□□□ -1.18
PEX28YHR150W SHU2P38957 223 aa7.65□□□□□ -1.18
PEX28YHR150W TVP23P38962 199 aa7.65□□□□□ -1.18
PEX28YHR150W PDS1P40316 373 aaPredicted RBP7.65□□□□□ -1.18
PEX28YHR150W RLP7P40693 322 aaKnown RBP7.65□□□□□ -1.18
PEX28YHR150W RRN7P40992 514 aa7.65□□□□□ -1.18
PEX28YHR150W SCY1P53009 804 aa7.65□□□□□ -1.18
PEX28YHR150W NCS6P53088 359 aa7.65□□□□□ -1.18
PEX28YHR150W RCF2P53721 224 aa7.65□□□□□ -1.18
PEX28YHR150W STP1Q00947 519 aa7.65□□□□□ -1.18
PEX28YHR150W ESC8Q08119 714 aa7.65□□□□□ -1.18
PEX28YHR150W MDM20Q12387 796 aaKnown RBP7.65□□□□□ -1.18
PEX28YHR150W SRF1Q12516 437 aa7.65□□□□□ -1.18
PEX28YHR150W RGS2Q99188 309 aa7.65□□□□□ -1.18
PEX28YHR150W MST1P07236 462 aa7.64□□□□□ -1.19
PEX28YHR150W MPH2P0CD99 609 aa7.64□□□□□ -1.19
PEX28YHR150W ERR1P0CX10 437 aa7.64□□□□□ -1.19
PEX28YHR150W ERR2P0CX11 437 aa7.64□□□□□ -1.19
PEX28YHR150W YPK1P12688 680 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W URA4P20051 364 aa7.64□□□□□ -1.19
PEX28YHR150W VAC17P25591 423 aa7.64□□□□□ -1.19
PEX28YHR150W SPR1P32603 445 aa7.64□□□□□ -1.19
PEX28YHR150W UTR2P32623 467 aa7.64□□□□□ -1.19
PEX28YHR150W SLA2P33338 968 aa7.64□□□□□ -1.19
PEX28YHR150W KDX1P36005 433 aa7.64□□□□□ -1.19
PEX28YHR150W CTP1P38152 299 aa7.64□□□□□ -1.19
PEX28YHR150W BEM4P39011 633 aa7.64□□□□□ -1.19
PEX28YHR150W MAF1P41910 395 aa7.64□□□□□ -1.19
PEX28YHR150W ERR3P42222 437 aa7.64□□□□□ -1.19
PEX28YHR150W RRT5P43607 289 aa7.64□□□□□ -1.19
PEX28YHR150W ARC1P46672 376 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W RFX1P48743 811 aa7.64□□□□□ -1.19
PEX28YHR150W NUP84P52891 726 aa7.64□□□□□ -1.19
PEX28YHR150W COG2P53271 262 aa7.64□□□□□ -1.19
PEX28YHR150W YGR127WP53275 312 aa7.64□□□□□ -1.19
PEX28YHR150W RCR2Q03446 210 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W SKY1Q03656 742 aa7.64□□□□□ -1.19
PEX28YHR150W TAF3Q12297 353 aa7.64□□□□□ -1.19
PEX28YHR150W TAL1P15019 335 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W SAN1P22470 610 aa7.64□□□□□ -1.19
PEX28YHR150W RPL5P26321 297 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W PDX3P38075 228 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W ESL1P40456 1118 aa7.64□□□□□ -1.19
PEX28YHR150W RSM7P47150 247 aa7.64□□□□□ -1.19
PEX28YHR150W RSA3Q05942 220 aaKnown RBP7.64□□□□□ -1.19
PEX28YHR150W ASA1Q06822 443 aa7.64□□□□□ -1.19
PEX28YHR150W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.64□□□□□ -1.19not detected
PEX28YHR150W DDC1Q08949 612 aa7.64□□□□□ -1.19
PEX28YHR150W TUB1P09733 447 aaKnown RBP7.63□□□□□ -1.19
PEX28YHR150W RAD51P25454 400 aa7.63□□□□□ -1.19
PEX28YHR150W YCL068CP25593 260 aa7.63□□□□□ -1.19
PEX28YHR150W FUB1P25659 250 aa7.63□□□□□ -1.19
PEX28YHR150W PHA2P32452 334 aa7.63□□□□□ -1.19
PEX28YHR150W PAH1P32567 862 aa7.63□□□□□ -1.19
PEX28YHR150W ECM4P36156 370 aa7.63□□□□□ -1.19
PEX28YHR150W GGA2P38817 585 aaKnown RBP7.63□□□□□ -1.19
PEX28YHR150W CRP1P38845 465 aaKnown RBP7.63□□□□□ -1.19
PEX28YHR150W SEC31P38968 1273 aaKnown RBP7.63□□□□□ -1.19
PEX28YHR150W MND2P40577 368 aa7.63□□□□□ -1.19
PEX28YHR150W YFL040WP43562 540 aa7.63□□□□□ -1.19
PEX28YHR150W YPR003CP53394 754 aa7.63□□□□□ -1.19
PEX28YHR150W SPC98P53540 846 aa7.63□□□□□ -1.19
PEX28YHR150W TAF11Q04226 346 aa7.63□□□□□ -1.19
PEX28YHR150W FAR10Q06001 478 aa7.63□□□□□ -1.19
PEX28YHR150W ENT4Q07872 247 aa7.63□□□□□ -1.19
PEX28YHR150W CHS5Q12114 671 aaKnown RBP7.63□□□□□ -1.19
PEX28YHR150W ADF1Q2V2Q1 113 aa7.63□□□□□ -1.19
PEX28YHR150W YPR089WO13585 888 aa7.62□□□□□ -1.19
PEX28YHR150W ENO1P00924 437 aaKnown RBP7.62□□□□□ -1.19
PEX28YHR150W HRR25P29295 494 aaKnown RBP7.62□□□□□ -1.19
PEX28YHR150W CYS3P31373 394 aaKnown RBP7.62□□□□□ -1.19
PEX28YHR150W HSP78P33416 811 aa7.62□□□□□ -1.19
PEX28YHR150W UIP5P36137 443 aa7.62□□□□□ -1.19
PEX28YHR150W RDH54P38086 958 aa7.62□□□□□ -1.19
PEX28YHR150W SLM4P38247 162 aa7.62□□□□□ -1.19
PEX28YHR150W AIM18P38884 321 aa7.62□□□□□ -1.19
PEX28YHR150W SET2P46995 733 aaKnown RBP7.62□□□□□ -1.19
PEX28YHR150W NMA2P53204 395 aa7.62□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 61.2 ms