RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W ORC3P54790 616 aa5.01□□□□□ -1.61
VPS29YHR012W YMR187CQ03236 431 aa5.01□□□□□ -1.61
VPS29YHR012W RPN4Q03465 531 aa5.01□□□□□ -1.61
VPS29YHR012W INP2Q03824 705 aa5.01□□□□□ -1.61
VPS29YHR012W RKM2Q03942 479 aa5.01□□□□□ -1.61
VPS29YHR012W YOR059CQ08448 450 aaKnown RBP5.01□□□□□ -1.61
VPS29YHR012W CWC2Q12046 339 aaPredicted RBP5.01□□□□□ -1.61
VPS29YHR012W PER33Q12144 273 aa5.01□□□□□ -1.61
VPS29YHR012W YLR046CQ12253 270 aa5.01□□□□□ -1.61
VPS29YHR012W BI3Q9ZZW7 517 aa5.01□□□□□ -1.61
VPS29YHR012W AI1P03875 834 aa5□□□□□ -1.61
VPS29YHR012W EST1P17214 699 aaPredicted RBP5□□□□□ -1.61
VPS29YHR012W MET16P18408 261 aaPredicted RBP5□□□□□ -1.61
VPS29YHR012W PUF4P25339 888 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VPS29YHR012W VAC17P25591 423 aa5□□□□□ -1.61
VPS29YHR012W ADY2P25613 283 aa5□□□□□ -1.61
VPS29YHR012W APM3P38153 483 aa5□□□□□ -1.61
VPS29YHR012W KAP104P38217 918 aaKnown RBP5□□□□□ -1.61
VPS29YHR012W SWC5P38326 303 aa5□□□□□ -1.61
VPS29YHR012W LEU5P38702 357 aa5□□□□□ -1.61
VPS29YHR012W YER158CP40095 573 aa5□□□□□ -1.61
VPS29YHR012W YJL070CP40361 888 aa5□□□□□ -1.61
VPS29YHR012W ASG1P40467 964 aa5□□□□□ -1.61
VPS29YHR012W YIL054WP40524 105 aa5□□□□□ -1.61
VPS29YHR012W EMW1P42842 904 aaKnown RBP5□□□□□ -1.61
VPS29YHR012W CNN1P43618 361 aa5□□□□□ -1.61
VPS29YHR012W CCT8P47079 568 aaKnown RBP5□□□□□ -1.61
VPS29YHR012W YGR111WP53265 400 aa5□□□□□ -1.61
VPS29YHR012W PRM1P53835 661 aa5□□□□□ -1.61
VPS29YHR012W YAT1P80235 687 aa5□□□□□ -1.61
VPS29YHR012W YMR178WQ03219 274 aaKnown RBP5□□□□□ -1.61
VPS29YHR012W YLR287CQ05881 355 aa5□□□□□ -1.61
VPS29YHR012W YFT2Q06676 274 aa5□□□□□ -1.61
VPS29YHR012W OPY2Q06810 360 aa5□□□□□ -1.61
VPS29YHR012W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
VPS29YHR012W PEX11Q12462 236 aa5□□□□□ -1.61
VPS29YHR012W KAR3P17119 729 aa4.99□□□□□ -1.61
VPS29YHR012W TRX1P22217 103 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W MNE1P24720 663 aa4.99□□□□□ -1.61
VPS29YHR012W GEX1P25596 615 aa4.99□□□□□ -1.61
VPS29YHR012W SFP1P32432 683 aa4.99□□□□□ -1.61
VPS29YHR012W RPN12P32496 274 aa4.99□□□□□ -1.61
VPS29YHR012W RRN6P32786 894 aa4.99□□□□□ -1.61
VPS29YHR012W SLD2P34252 453 aa4.99□□□□□ -1.61
VPS29YHR012W GEX2P36173 615 aa4.99□□□□□ -1.61
VPS29YHR012W JNM1P36224 373 aa4.99□□□□□ -1.61
VPS29YHR012W YBR238CP38330 731 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W RRP3P38712 501 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W MSR1P38714 643 aa4.99□□□□□ -1.61
VPS29YHR012W OCA5P38738 679 aa4.99□□□□□ -1.61
VPS29YHR012W PFS1P38872 237 aa4.99□□□□□ -1.61
VPS29YHR012W UME6P39001 836 aa4.99□□□□□ -1.61
VPS29YHR012W ERP2P39704 215 aa4.99□□□□□ -1.61
VPS29YHR012W RVS167P39743 482 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W YER189WP40104 122 aa4.99□□□□□ -1.61
VPS29YHR012W TMA108P40462 946 aa4.99□□□□□ -1.61
VPS29YHR012W SER33P40510 469 aa4.99□□□□□ -1.61
VPS29YHR012W DLD2P46681 530 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W YJR124CP47159 448 aa4.99□□□□□ -1.61
VPS29YHR012W TCB2P48231 1178 aa4.99□□□□□ -1.61
VPS29YHR012W MNN10P50108 393 aaKnown RBP4.99□□□□□ -1.61
VPS29YHR012W YGL140CP53120 1219 aa4.99□□□□□ -1.61
VPS29YHR012W NPY1P53164 384 aa4.99□□□□□ -1.61
VPS29YHR012W YPL113CQ02961 396 aa4.99□□□□□ -1.61
VPS29YHR012W PPN1Q04119 674 aa4.99□□□□□ -1.61
VPS29YHR012W ARA2Q04212 335 aa4.99□□□□□ -1.61
VPS29YHR012W YLR456WQ06199 204 aa4.99□□□□□ -1.61
VPS29YHR012W THI72Q08579 599 aa4.99□□□□□ -1.61
VPS29YHR012W TRE2Q08693 809 aa4.99□□□□□ -1.61
VPS29YHR012W SEY1Q99287 776 aa4.99□□□□□ -1.61
VPS29YHR012W SUC2P00724 532 aa4.98□□□□□ -1.61
VPS29YHR012W RPS6AP0CX37 236 aaKnown RBP4.98□□□□□ -1.61
VPS29YHR012W RPS6BP0CX38 236 aaPredicted RBP4.98□□□□□ -1.61
VPS29YHR012W SNF5P18480 905 aa4.98□□□□□ -1.61
VPS29YHR012W BRF1P29056 596 aa4.98□□□□□ -1.61
VPS29YHR012W WSC4P38739 605 aa4.98□□□□□ -1.61
VPS29YHR012W SPC72P39723 622 aa4.98□□□□□ -1.61
VPS29YHR012W ERV46P39727 415 aa4.98□□□□□ -1.61
VPS29YHR012W VFA1P40080 203 aa4.98□□□□□ -1.61
VPS29YHR012W YPS6P40583 537 aa4.98□□□□□ -1.61
VPS29YHR012W SNG1P46950 547 aa4.98□□□□□ -1.61
VPS29YHR012W AMA1P50082 593 aa4.98□□□□□ -1.61
VPS29YHR012W COG7P53195 279 aa4.98□□□□□ -1.61
VPS29YHR012W SWS2P53937 143 aa4.98□□□□□ -1.61
VPS29YHR012W TGL2P54857 326 aa4.98□□□□□ -1.61
VPS29YHR012W CDC55Q00362 526 aa4.98□□□□□ -1.61
VPS29YHR012W TRM82Q03774 444 aa4.98□□□□□ -1.61
VPS29YHR012W YDR222WQ04925 415 aa4.98□□□□□ -1.61
VPS29YHR012W YPR114WQ06107 315 aa4.98□□□□□ -1.61
VPS29YHR012W TMA16Q08687 178 aa4.98□□□□□ -1.61
VPS29YHR012W YKR104WP0CE69 306 aa4.97□□□□□ -1.61
VPS29YHR012W SEC63P14906 663 aa4.97□□□□□ -1.61
VPS29YHR012W CLC1P17891 233 aa4.97□□□□□ -1.61
VPS29YHR012W MRPL8P22353 238 aa4.97□□□□□ -1.61
VPS29YHR012W SEC65P29478 273 aa4.97□□□□□ -1.61
VPS29YHR012W KAR9P32526 644 aa4.97□□□□□ -1.61
VPS29YHR012W WBP1P33767 430 aaKnown RBP4.97□□□□□ -1.61
VPS29YHR012W YKL050CP35736 922 aa4.97□□□□□ -1.61
VPS29YHR012W PSY4P38193 441 aa4.97□□□□□ -1.61
VPS29YHR012W STN1P38960 494 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms