RNA–Protein interactions for RNA: YEL051W

VMA8, Transcript of Subunit D of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA8, Length 771 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA8	YEL051W	SCS2	P40075	244 aa	Known RBP	3.5	□□□□□ -1.85
VMA8	YEL051W	SNO3	P43544	222 aa		3.5	□□□□□ -1.85
VMA8	YEL051W	SAE2	P46946	345 aa		3.5	□□□□□ -1.85
VMA8	YEL051W	BPL1	P48445	690 aa	Predicted RBP	3.5	□□□□□ -1.85
VMA8	YEL051W	ERG13	P54839	491 aa	Known RBP	3.5	□□□□□ -1.85
VMA8	YEL051W	RSC9	Q03124	581 aa		3.5	□□□□□ -1.85
VMA8	YEL051W	YDR341C	Q05506	607 aa	Known RBP	3.5	□□□□□ -1.85
VMA8	YEL051W	HIM1	Q06674	414 aa		3.5	□□□□□ -1.85
VMA8	YEL051W	AHA1	Q12449	350 aa	Known RBP	3.5	□□□□□ -1.85
VMA8	YEL051W	PIF1	P07271	859 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	CBP3	P21560	335 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	OPI1	P21957	404 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	URE2	P23202	354 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	YJU2	P28320	278 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	TGL1	P34163	548 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	VPS27	P40343	622 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	MAD2	P40958	196 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	VPS4	P52917	437 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	COS12	P53053	380 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	YNL092W	P53934	400 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	IDP3	P53982	420 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	MPS1	P54199	764 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	CEG1	Q01159	459 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	ECM16	Q04217	1267 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	HRD3	Q05787	833 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	SPN1	Q06505	410 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	YDL121C	Q07541	149 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	CRT10	Q08226	957 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	GEP3	Q08622	556 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	APL5	Q08951	932 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	DIN7	Q12086	430 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	RTK1	Q12100	620 aa	Predicted RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	PSF3	Q12146	194 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	RRP6	Q12149	733 aa	Known RBP	3.49	□□□□□ -1.85
VMA8	YEL051W	HOS1	Q12214	470 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	YOL114C	Q12322	202 aa		3.49	□□□□□ -1.85
VMA8	YEL051W	QCR6	P00127	147 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	URA3	P03962	267 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	PGI1	P12709	554 aa	Known RBP	3.48	□□□□□ -1.85
VMA8	YEL051W	ECM32	P32644	1121 aa	Known RBP	3.48	□□□□□ -1.85
VMA8	YEL051W	SDH8	P38345	138 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	YHL041W	P38730	149 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	UBX4	P54730	416 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	VMS1	Q04311	632 aa	Known RBP	3.48	□□□□□ -1.85
VMA8	YEL051W	TMA64	Q04600	565 aa	Known RBP	3.48	□□□□□ -1.85
VMA8	YEL051W	ENT2	Q05785	613 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	YLR111W	Q12528	110 aa		3.48	□□□□□ -1.85
VMA8	YEL051W	VAS1	P07806	1104 aa	Known RBP	3.47	□□□□□ -1.85
VMA8	YEL051W	ADH4	P10127	382 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	SEC18	P18759	758 aa	Known RBP	3.47	□□□□□ -1.85
VMA8	YEL051W	MSH1	P25846	959 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	PET309	P32522	965 aa	Predicted RBP	3.47	□□□□□ -1.85
VMA8	YEL051W	QRI7	P43122	407 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	YNR071C	P53757	342 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	TEP1	P53916	434 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	ATG16	Q03818	150 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	RAD33	Q04231	177 aa		3.47	□□□□□ -1.85
VMA8	YEL051W	HEL2	Q05580	639 aa	Known RBP	3.47	□□□□□ -1.85
VMA8	YEL051W	BI2	P03873	423 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	PHO81	P17442	1178 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	MSM1	P22438	575 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	GDA1	P32621	518 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	STB5	P38699	743 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	FUN12	P39730	1002 aa	Known RBP	3.46	□□□□□ -1.86
VMA8	YEL051W	SSP120	P39931	234 aa	Known RBP	3.46	□□□□□ -1.86
VMA8	YEL051W	DJP1	P40564	432 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	YPL071C	Q02864	156 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	RCF1	Q03713	159 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	GRX3	Q03835	250 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	TPO3	Q06451	622 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	CYK3	Q07533	885 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	DBP10	Q12389	995 aa	Known RBP	3.46	□□□□□ -1.86
VMA8	YEL051W	ARP7	Q12406	477 aa		3.46	□□□□□ -1.86
VMA8	YEL051W	TY1B-A	O13527	1196 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	MSS18	P08593	268 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	YMR085W	P0CF18	432 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	APA1	P16550	321 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	RAD51	P25454	400 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	PWP2	P25635	923 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	SPC110	P32380	944 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	VPS24	P36095	224 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	TAF5	P38129	798 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	APM3	P38153	483 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	FUI1	P38196	639 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	NPR3	P38742	1146 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	MTG2	P38860	518 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	RRP8	P38961	392 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	SWD1	P39706	426 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	LAS21	P40367	830 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	SEC27	P41811	889 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	GSM1	P42950	618 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	MAD3	P47074	515 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	ESF2	P53743	316 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	MOT3	P54785	490 aa	Known RBP	3.45	□□□□□ -1.86
VMA8	YEL051W	ACS1	Q01574	713 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	YPL068C	Q02749	293 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	COG4	Q06096	861 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	CIR2	Q08822	631 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	ERP4	Q12450	207 aa		3.45	□□□□□ -1.86
VMA8	YEL051W	AMD2	P22580	549 aa		3.44	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 8 ms