RNA–Protein interactions for RNA: YEL027W

VMA3, Transcript of Proteolipid subunit c of the V0 domain of vacuolar H(+)-ATPase, yeast

Gene VMA3, Length 483 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA3	YEL027W	YGR127W	P53275	312 aa		6.64	□□□□□ -1.35
VMA3	YEL027W	ACM1	Q08981	209 aa		6.64	□□□□□ -1.35
VMA3	YEL027W	IRA2	P19158	3079 aa		6.64	□□□□□ -1.35
VMA3	YEL027W	CBF1	P17106	351 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	MGT1	P26188	188 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	SEC6	P32844	805 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	LTV1	P34078	463 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	MUD2	P36084	527 aa	Known RBP	6.63	□□□□□ -1.35
VMA3	YEL027W	MSR1	P38714	643 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	YEL028W	P39989	153 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	UBP7	P40453	1071 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	MVP1	P40959	511 aa	Known RBP	6.63	□□□□□ -1.35
VMA3	YEL027W	EMW1	P42842	904 aa	Known RBP	6.63	□□□□□ -1.35
VMA3	YEL027W	CNN1	P43618	361 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	SNG1	P46950	547 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	ATG36	P46983	293 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	YJR039W	P47107	1121 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	PCL10	P53124	433 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	INP2	Q03824	705 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	CDC73	Q06697	393 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	YLR012C	Q07927	99 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	AAD15	Q08361	143 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	NRT1	Q08485	598 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.63	□□□□□ -1.35	not detected
VMA3	YEL027W	AI5_ALPHA	Q9ZZX1	630 aa		6.63	□□□□□ -1.35
VMA3	YEL027W	MSF1	P08425	469 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	PAT1	P25644	796 aa	Known RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	MET22	P32179	357 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	GUT1	P32190	709 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	YME1	P32795	747 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	GIP1	P38229	639 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	URA8	P38627	578 aa	Predicted RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	OTU2	P38747	307 aa	Known RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	DUN1	P39009	513 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	GDH3	P39708	457 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	VAC8	P39968	578 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	BST1	P43571	1029 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	RPS10B	P46784	105 aa	Known RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	PRP24	P49960	444 aa	Known RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	RTA1	P53047	317 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	FLC3	P53121	802 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	YPR003C	P53394	754 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	TRM112	P53738	135 aa	Predicted RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	NMA111	P53920	997 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	COG6	P53959	839 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	YNL035C	P53962	389 aa	Known RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	YMR206W	Q03695	313 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	MSH6	Q03834	1242 aa		6.62	□□□□□ -1.35
VMA3	YEL027W	RPS10A	Q08745	105 aa	Predicted RBP	6.62	□□□□□ -1.35
VMA3	YEL027W	MIS1	P09440	975 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	IMA3	P0CW40	589 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	IMA4	P0CW41	589 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	ADH4	P10127	382 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	ARF2	P19146	181 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	AIM26	P32858	118 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	STE13	P33894	931 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	TCD2	P36101	447 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	KAP104	P38217	918 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	PPX1	P38698	397 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	PPE1	P38796	400 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	CIN4	P39110	191 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	SCC4	P40090	624 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	SAE2	P46946	345 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	IML2	P47031	731 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	PYK2	P52489	506 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	VEL1	P53058	206 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	CPR6	P53691	371 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	ENT5	Q03769	411 aa	Known RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	YMR027W	Q04371	470 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	YSH1	Q06224	779 aa	Predicted RBP	6.61	□□□□□ -1.35
VMA3	YEL027W	SWC7	Q06707	132 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	IMA2	Q08295	589 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	NDD1	Q08887	554 aa		6.61	□□□□□ -1.35
VMA3	YEL027W	SEN1	Q00416	2231 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	CMD1	P06787	147 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	HEM15	P16622	393 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	TSR4	P25040	408 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	TPS2	P31688	896 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	KES1	P35844	434 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	SRP68	P38687	599 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	GIP4	P39732	760 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	EXO1	P39875	702 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	YAT2	P40017	923 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	ATM1	P40416	690 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	KTR7	P40504	517 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	DLD2	P46681	530 aa	Known RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	TAN1	P53072	289 aa	Predicted RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	6.6	□□□□□ -1.35	not detected
VMA3	YEL027W	TDA7	P53882	636 aa	Predicted RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	DOS2	P54858	310 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	SHR3	Q02774	210 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	RPN4	Q03465	531 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	ADI1	Q03677	179 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	HPF1	Q05164	967 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	PNP1	Q05788	311 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	STE23	Q06010	1027 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	FRA1	Q07825	749 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	MPC54	Q08550	464 aa		6.6	□□□□□ -1.35
VMA3	YEL027W	CLP1	Q08685	445 aa	Predicted RBP	6.6	□□□□□ -1.35
VMA3	YEL027W	YKL068W-A	Q3E826	78 aa		6.6	□□□□□ -1.35

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms