RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W MRPL9P31334 269 aa4.32□□□□□ -1.72
RPN9YDR427W VPS8P39702 1274 aa4.32□□□□□ -1.72
RPN9YDR427W TEP1P53916 434 aa4.32□□□□□ -1.72
RPN9YDR427W EIS1Q05050 843 aaKnown RBP4.32□□□□□ -1.72
RPN9YDR427W RRP6Q12149 733 aaKnown RBP4.32□□□□□ -1.72
RPN9YDR427W SEC3P33332 1336 aaKnown RBP4.31□□□□□ -1.72
RPN9YDR427W KGD2P19262 463 aaPredicted RBP4.31□□□□□ -1.72
RPN9YDR427W AMD2P22580 549 aa4.31□□□□□ -1.72
RPN9YDR427W GSY2P27472 705 aa4.31□□□□□ -1.72
RPN9YDR427W ECM32P32644 1121 aaKnown RBP4.31□□□□□ -1.72
RPN9YDR427W BEM3P32873 1128 aa4.31□□□□□ -1.72
RPN9YDR427W STT3P39007 718 aaKnown RBP4.31□□□□□ -1.72
RPN9YDR427W ARB1P40024 610 aaKnown RBP4.31□□□□□ -1.72
RPN9YDR427W HIS6P40545 261 aa4.31□□□□□ -1.72
RPN9YDR427W AIM6Q07716 390 aa4.31□□□□□ -1.72
RPN9YDR427W YOL057WQ08225 711 aa4.31□□□□□ -1.72
RPN9YDR427W NEW1Q08972 1196 aaKnown RBP4.31□□□□□ -1.72
RPN9YDR427W SIR1P21691 654 aa4.3□□□□□ -1.72
RPN9YDR427W GDA1P32621 518 aa4.3□□□□□ -1.72
RPN9YDR427W ARO9P38840 513 aaPredicted RBP4.3□□□□□ -1.72
RPN9YDR427W MAM1P40065 302 aa4.3□□□□□ -1.72
RPN9YDR427W LAS21P40367 830 aa4.3□□□□□ -1.72
RPN9YDR427W NOP2P40991 618 aaKnown RBP4.3□□□□□ -1.72
RPN9YDR427W BST1P43571 1029 aa4.3□□□□□ -1.72
RPN9YDR427W SAE2P46946 345 aa4.3□□□□□ -1.72
RPN9YDR427W ATP23P53722 227 aa4.3□□□□□ -1.72
RPN9YDR427W YML119WQ03208 357 aa4.3□□□□□ -1.72
RPN9YDR427W VPS64Q03944 604 aa4.3□□□□□ -1.72
RPN9YDR427W RAD33Q04231 177 aa4.3□□□□□ -1.72
RPN9YDR427W HRD3Q05787 833 aa4.3□□□□□ -1.72
RPN9YDR427W LCB4Q12246 624 aa4.3□□□□□ -1.72
RPN9YDR427W FRE7Q12333 620 aa4.3□□□□□ -1.72
RPN9YDR427W CTT1P06115 562 aa4.29□□□□□ -1.72
RPN9YDR427W RPS7AP26786 190 aaKnown RBP4.29□□□□□ -1.72
RPN9YDR427W APD1P38281 316 aa4.29□□□□□ -1.72
RPN9YDR427W MOT3P54785 490 aaKnown RBP4.29□□□□□ -1.72
RPN9YDR427W SPN1Q06505 410 aaPredicted RBP4.29□□□□□ -1.72
RPN9YDR427W AHA1Q12449 350 aaKnown RBP4.29□□□□□ -1.72
RPN9YDR427W BIK1P11709 440 aa4.28□□□□□ -1.72
RPN9YDR427W YHL041WP38730 149 aa4.28□□□□□ -1.72
RPN9YDR427W SPC97P38863 823 aa4.28□□□□□ -1.72
RPN9YDR427W SPC72P39723 622 aa4.28□□□□□ -1.72
RPN9YDR427W YJL043WP47053 257 aa4.28□□□□□ -1.72
RPN9YDR427W ESF2P53743 316 aaKnown RBP4.28□□□□□ -1.72
RPN9YDR427W ERG13P54839 491 aaKnown RBP4.28□□□□□ -1.72
RPN9YDR427W IOC4Q04213 475 aa4.28□□□□□ -1.72
RPN9YDR427W ICL2Q12031 575 aa4.28□□□□□ -1.72
RPN9YDR427W RDL1Q12305 139 aaKnown RBP4.28□□□□□ -1.72
RPN9YDR427W PIF1P07271 859 aa4.27□□□□□ -1.73
RPN9YDR427W MCM3P24279 971 aaKnown RBP4.27□□□□□ -1.73
RPN9YDR427W RRP43P25359 394 aaPredicted RBP4.27□□□□□ -1.73
RPN9YDR427W APM3P38153 483 aa4.27□□□□□ -1.73
RPN9YDR427W CPR6P53691 371 aaKnown RBP4.27□□□□□ -1.73
RPN9YDR427W UBP16Q02863 499 aa4.27□□□□□ -1.73
RPN9YDR427W CRF1Q04930 467 aa4.27□□□□□ -1.73
RPN9YDR427W BSP1Q06604 576 aa4.27□□□□□ -1.73
RPN9YDR427W CYK3Q07533 885 aa4.27□□□□□ -1.73
RPN9YDR427W YDL242WQ07746 117 aa4.27□□□□□ -1.73
RPN9YDR427W YBR255C-AQ3E776 120 aa4.27□□□□□ -1.73
RPN9YDR427W IMA1P53051 589 aa4.26□□□□□ -1.73
RPN9YDR427W TAN1P53072 289 aaPredicted RBP4.26□□□□□ -1.73
RPN9YDR427W COG2P53271 262 aa4.26□□□□□ -1.73
RPN9YDR427W SCW4P53334 386 aaKnown RBP4.26□□□□□ -1.73
RPN9YDR427W IWR1Q07532 353 aaPredicted RBP4.26□□□□□ -1.73
RPN9YDR427W NYV1Q12255 253 aa4.26□□□□□ -1.73
RPN9YDR427W YLR111WQ12528 110 aa4.26□□□□□ -1.73
RPN9YDR427W YER175W-AQ8TGU4 54 aa4.26□□□□□ -1.73
RPN9YDR427W POL3P15436 1097 aa4.25□□□□□ -1.73
RPN9YDR427W MAK32P23060 363 aa4.25□□□□□ -1.73
RPN9YDR427W MSH1P25846 959 aa4.25□□□□□ -1.73
RPN9YDR427W KES1P35844 434 aaKnown RBP4.25□□□□□ -1.73
RPN9YDR427W MTG2P38860 518 aa4.25□□□□□ -1.73
RPN9YDR427W SAP1P39955 897 aaKnown RBP4.25□□□□□ -1.73
RPN9YDR427W CAB2P40506 365 aa4.25□□□□□ -1.73
RPN9YDR427W MNT3P40549 630 aa4.25□□□□□ -1.73
RPN9YDR427W SNO3P43544 222 aa4.25□□□□□ -1.73
RPN9YDR427W NMD5P46970 1048 aa4.25□□□□□ -1.73
RPN9YDR427W PAP2P53632 584 aaKnown RBP4.25□□□□□ -1.73
RPN9YDR427W HIM1Q06674 414 aa4.25□□□□□ -1.73
RPN9YDR427W PXL1P36166 706 aa4.24□□□□□ -1.73
RPN9YDR427W LNP1P38878 278 aa4.24□□□□□ -1.73
RPN9YDR427W CCT4P39078 528 aaKnown RBP4.24□□□□□ -1.73
RPN9YDR427W PCI8P40512 444 aa4.24□□□□□ -1.73
RPN9YDR427W CIR1P42940 261 aa4.24□□□□□ -1.73
RPN9YDR427W UBX4P54730 416 aa4.24□□□□□ -1.73
RPN9YDR427W PLM2Q04383 521 aa4.24□□□□□ -1.73
RPN9YDR427W RAD34Q06665 692 aa4.24□□□□□ -1.73
RPN9YDR427W CET1O13297 549 aaPredicted RBP4.23□□□□□ -1.73
RPN9YDR427W ADE3P07245 946 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W SES1P07284 462 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W YEF3P16521 1044 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W RIT1P23796 513 aa4.23□□□□□ -1.73
RPN9YDR427W SWI4P25302 1093 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W ERC1P38767 581 aa4.23□□□□□ -1.73
RPN9YDR427W ACA1P39970 489 aa4.23□□□□□ -1.73
RPN9YDR427W RPT2P40327 437 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W VPS27P40343 622 aaKnown RBP4.23□□□□□ -1.73
RPN9YDR427W GIS2P53849 153 aaKnown RBP RIP-Chip data4.23□□□□□ -1.73not detected
RPN9YDR427W YPL108WQ02872 168 aaPredicted RBP4.23□□□□□ -1.73
RPN9YDR427W YML053CQ04978 212 aa4.23□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms