RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W SSN3P39073 555 aa3.43□□□□□ -1.86
SIZ1YDR409W TIF4631P39935 952 aaKnown RBP3.43□□□□□ -1.86
SIZ1YDR409W SCS2P40075 244 aaKnown RBP3.43□□□□□ -1.86
SIZ1YDR409W IRC5P43610 853 aa3.43□□□□□ -1.86
SIZ1YDR409W RBG2P53295 368 aaKnown RBP3.43□□□□□ -1.86
SIZ1YDR409W REG1Q00816 1014 aa3.43□□□□□ -1.86
SIZ1YDR409W RSC3Q06639 885 aa3.43□□□□□ -1.86
SIZ1YDR409W RTK1Q12100 620 aaPredicted RBP3.43□□□□□ -1.86
SIZ1YDR409W ZRT2Q12436 422 aa3.43□□□□□ -1.86
SIZ1YDR409W SEY1Q99287 776 aa3.43□□□□□ -1.86
SIZ1YDR409W MYO1P08964 1928 aa3.43□□□□□ -1.86
SIZ1YDR409W PEP5P12868 1029 aa3.43□□□□□ -1.86
SIZ1YDR409W SDH2P21801 266 aa3.43□□□□□ -1.86
SIZ1YDR409W APN1P22936 367 aa3.43□□□□□ -1.86
SIZ1YDR409W MAK31P23059 88 aa3.43□□□□□ -1.86
SIZ1YDR409W CMK1P27466 446 aaKnown RBP3.43□□□□□ -1.86
SIZ1YDR409W SIN4P32259 974 aa3.43□□□□□ -1.86
SIZ1YDR409W KAR9P32526 644 aa3.43□□□□□ -1.86
SIZ1YDR409W NIP100P33420 868 aa3.43□□□□□ -1.86
SIZ1YDR409W GEX2P36173 615 aa3.43□□□□□ -1.86
SIZ1YDR409W UBP5P39944 805 aa3.43□□□□□ -1.86
SIZ1YDR409W TOK1P40310 691 aa3.43□□□□□ -1.86
SIZ1YDR409W INA22P40576 216 aa3.43□□□□□ -1.86
SIZ1YDR409W MAD2P40958 196 aa3.43□□□□□ -1.86
SIZ1YDR409W NMD5P46970 1048 aa3.43□□□□□ -1.86
SIZ1YDR409W LYS4P49367 693 aaPredicted RBP3.43□□□□□ -1.86
SIZ1YDR409W FOL2P51601 243 aaKnown RBP3.43□□□□□ -1.86
SIZ1YDR409W RIM8P53179 542 aa3.43□□□□□ -1.86
SIZ1YDR409W YNR068CP53754 272 aa3.43□□□□□ -1.86
SIZ1YDR409W TOF1P53840 1238 aa3.43□□□□□ -1.86
SIZ1YDR409W MRPL19P53875 158 aa3.43□□□□□ -1.86
SIZ1YDR409W TBF1Q02457 562 aa3.43□□□□□ -1.86
SIZ1YDR409W YMR187CQ03236 431 aa3.43□□□□□ -1.86
SIZ1YDR409W ECM22Q05958 814 aaPredicted RBP3.43□□□□□ -1.86
SIZ1YDR409W ADY3Q07732 790 aa3.43□□□□□ -1.86
SIZ1YDR409W YPR071WQ12346 211 aa3.43□□□□□ -1.86
SIZ1YDR409W SPO21Q12411 609 aa3.43□□□□□ -1.86
SIZ1YDR409W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.43□□□□□ -1.86not detected
SIZ1YDR409W MET17P06106 444 aa3.42□□□□□ -1.86
SIZ1YDR409W LEU1P07264 779 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W CLN3P13365 580 aa3.42□□□□□ -1.86
SIZ1YDR409W PDX1P16451 410 aa3.42□□□□□ -1.86
SIZ1YDR409W PWP1P21304 576 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W RME1P32338 300 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W RPC82P32349 654 aa3.42□□□□□ -1.86
SIZ1YDR409W TFA2P36145 328 aa3.42□□□□□ -1.86
SIZ1YDR409W PIM1P36775 1133 aa3.42□□□□□ -1.86
SIZ1YDR409W YHR202WP38887 602 aa3.42□□□□□ -1.86
SIZ1YDR409W SHE10P53075 577 aa3.42□□□□□ -1.86
SIZ1YDR409W BNI5P53890 448 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W RPL22BP56628 122 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W LAP3Q01532 483 aaKnown RBP RIP-Chip data3.42□□□□□ -1.86not detected
SIZ1YDR409W ATP25Q03153 612 aa3.42□□□□□ -1.86
SIZ1YDR409W YMR155WQ03795 547 aa3.42□□□□□ -1.86
SIZ1YDR409W ARV1Q06541 321 aa3.42□□□□□ -1.86
SIZ1YDR409W MET7Q08645 548 aa3.42□□□□□ -1.86
SIZ1YDR409W AIM41Q12032 185 aa3.42□□□□□ -1.86
SIZ1YDR409W SMF3Q12078 473 aaPredicted RBP3.42□□□□□ -1.86
SIZ1YDR409W DIN7Q12086 430 aa3.42□□□□□ -1.86
SIZ1YDR409W SGT2Q12118 346 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W PSY3Q12318 242 aa3.42□□□□□ -1.86
SIZ1YDR409W Q0182Q9ZZW1 134 aa3.42□□□□□ -1.86
SIZ1YDR409W THR4P16120 514 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W OM45P16547 393 aa3.42□□□□□ -1.86
SIZ1YDR409W DAP2P18962 818 aa3.42□□□□□ -1.86
SIZ1YDR409W CDC48P25694 835 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W FRD1P32614 470 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W SEC66P33754 206 aa3.42□□□□□ -1.86
SIZ1YDR409W NUF2P33895 451 aa3.42□□□□□ -1.86
SIZ1YDR409W YBL055CP34220 418 aaPredicted RBP3.42□□□□□ -1.86
SIZ1YDR409W JNM1P36224 373 aa3.42□□□□□ -1.86
SIZ1YDR409W ADH5P38113 351 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W TDA11P38854 504 aa3.42□□□□□ -1.86
SIZ1YDR409W AIM20P40451 204 aa3.42□□□□□ -1.86
SIZ1YDR409W ALG2P43636 503 aa3.42□□□□□ -1.86
SIZ1YDR409W RET3P53600 189 aa3.42□□□□□ -1.86
SIZ1YDR409W NOP15P53927 220 aaPredicted RBP3.42□□□□□ -1.86
SIZ1YDR409W GIS4Q04233 774 aa3.42□□□□□ -1.86
SIZ1YDR409W GTB1Q04924 702 aa3.42□□□□□ -1.86
SIZ1YDR409W YPR078CQ06813 372 aa3.42□□□□□ -1.86
SIZ1YDR409W PEX15Q08215 383 aa3.42□□□□□ -1.86
SIZ1YDR409W YPL216WQ08964 1102 aa3.42□□□□□ -1.86
SIZ1YDR409W PCD1Q12524 340 aa3.42□□□□□ -1.86
SIZ1YDR409W ILV2P07342 687 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W CKA2P19454 339 aa3.42□□□□□ -1.86
SIZ1YDR409W ISY1P21374 235 aaPredicted RBP3.42□□□□□ -1.86
SIZ1YDR409W RIB7P33312 244 aa3.42□□□□□ -1.86
SIZ1YDR409W CTF13P35203 478 aa3.42□□□□□ -1.86
SIZ1YDR409W SAH1P39954 449 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W YEL057CP39983 233 aa3.42□□□□□ -1.86
SIZ1YDR409W YIL165CP40446 119 aa3.42□□□□□ -1.86
SIZ1YDR409W SDS3P40505 327 aa3.42□□□□□ -1.86
SIZ1YDR409W LEM3P42838 414 aa3.42□□□□□ -1.86
SIZ1YDR409W ATP22P50273 684 aaPredicted RBP3.42□□□□□ -1.86
SIZ1YDR409W ASI1P54074 624 aa3.42□□□□□ -1.86
SIZ1YDR409W LEE1Q02799 301 aaKnown RBP3.42□□□□□ -1.86
SIZ1YDR409W PEX29Q03370 554 aa3.42□□□□□ -1.86
SIZ1YDR409W YPL272CQ08984 517 aa3.42□□□□□ -1.86
SIZ1YDR409W LAP2Q10740 671 aa3.42□□□□□ -1.86
SIZ1YDR409W SOD2P00447 233 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms