RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W ARC35P53731 342 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
MSN5YDR335W YPL107WQ02873 248 aa1.46□□□□□ -2.18
MSN5YDR335W INP2Q03824 705 aa1.46□□□□□ -2.18
MSN5YDR335W RSF1Q05043 376 aa1.46□□□□□ -2.18
MSN5YDR335W APC5Q08683 685 aa1.46□□□□□ -2.18
MSN5YDR335W ENV7Q12003 364 aa1.46□□□□□ -2.18
MSN5YDR335W PSF3Q12146 194 aa1.46□□□□□ -2.18
MSN5YDR335W YDR061WQ12298 539 aa1.46□□□□□ -2.18
MSN5YDR335W GPM3Q12326 303 aa1.46□□□□□ -2.18
MSN5YDR335W ATG11Q12527 1178 aa1.46□□□□□ -2.18
MSN5YDR335W CTF3Q12748 733 aa1.46□□□□□ -2.18
MSN5YDR335W RPL11BQ3E757 174 aaPredicted RBP1.46□□□□□ -2.18
MSN5YDR335W YML002WP0CF17 737 aa1.46□□□□□ -2.18
MSN5YDR335W PUT4P15380 627 aa1.46□□□□□ -2.18
MSN5YDR335W MCM3P24279 971 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W RRP7P25368 297 aaPredicted RBP1.46□□□□□ -2.18
MSN5YDR335W SEC21P32074 935 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W NGG1P32494 702 aa1.46□□□□□ -2.18
MSN5YDR335W LRG1P35688 1017 aa1.46□□□□□ -2.18
MSN5YDR335W UBP11P36026 717 aa1.46□□□□□ -2.18
MSN5YDR335W TAF5P38129 798 aa1.46□□□□□ -2.18
MSN5YDR335W STB5P38699 743 aa1.46□□□□□ -2.18
MSN5YDR335W YHR218WP38899 603 aa1.46□□□□□ -2.18
MSN5YDR335W SWD1P39706 426 aa1.46□□□□□ -2.18
MSN5YDR335W NOP16P40007 231 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W ARB1P40024 610 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W OSW5P40219 148 aa1.46□□□□□ -2.18
MSN5YDR335W CAB2P40506 365 aa1.46□□□□□ -2.18
MSN5YDR335W MTR3P48240 250 aaPredicted RBP1.46□□□□□ -2.18
MSN5YDR335W RRT6P53117 311 aaPredicted RBP1.46□□□□□ -2.18
MSN5YDR335W REG1Q00816 1014 aa1.46□□□□□ -2.18
MSN5YDR335W ACS1Q01574 713 aa1.46□□□□□ -2.18
MSN5YDR335W ABZ2Q03266 374 aa1.46□□□□□ -2.18
MSN5YDR335W ERB1Q04660 807 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W ARV1Q06541 321 aa1.46□□□□□ -2.18
MSN5YDR335W ECM30Q06673 1274 aa1.46□□□□□ -2.18
MSN5YDR335W OSW2Q12202 724 aa1.46□□□□□ -2.18
MSN5YDR335W AFI1Q99222 893 aa1.46□□□□□ -2.18
MSN5YDR335W NUP192P47054 1683 aa1.46□□□□□ -2.18
MSN5YDR335W PDE2P06776 526 aa1.46□□□□□ -2.18
MSN5YDR335W STE13P33894 931 aa1.46□□□□□ -2.18
MSN5YDR335W FLR1P38124 548 aa1.46□□□□□ -2.18
MSN5YDR335W YHR054CP38780 354 aa1.46□□□□□ -2.18
MSN5YDR335W FLC2P39719 783 aa1.46□□□□□ -2.18
MSN5YDR335W JHD1P40034 492 aa1.46□□□□□ -2.18
MSN5YDR335W YIL089WP40500 205 aa1.46□□□□□ -2.18
MSN5YDR335W PRM2P40534 656 aa1.46□□□□□ -2.18
MSN5YDR335W LEM3P42838 414 aa1.46□□□□□ -2.18
MSN5YDR335W SKP2P42843 763 aa1.46□□□□□ -2.18
MSN5YDR335W COG1P53079 417 aa1.46□□□□□ -2.18
MSN5YDR335W YBP2P53169 641 aa1.46□□□□□ -2.18
MSN5YDR335W NOG2P53742 486 aaKnown RBP1.46□□□□□ -2.18
MSN5YDR335W ALF1P53904 254 aa1.46□□□□□ -2.18
MSN5YDR335W CIK1Q01649 594 aa1.46□□□□□ -2.18
MSN5YDR335W ROT1Q03691 256 aa1.46□□□□□ -2.18
MSN5YDR335W TAF11Q04226 346 aa1.46□□□□□ -2.18
MSN5YDR335W CDC45Q08032 650 aa1.46□□□□□ -2.18
MSN5YDR335W KEL3Q08979 651 aaPredicted RBP1.46□□□□□ -2.18
MSN5YDR335W VPS54Q12071 889 aa1.46□□□□□ -2.18
MSN5YDR335W TPK2P06245 380 aa1.45□□□□□ -2.18
MSN5YDR335W LAT1P12695 482 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W CBS1P14066 229 aa1.45□□□□□ -2.18
MSN5YDR335W LCB1P25045 558 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W STE50P25344 346 aa1.45□□□□□ -2.18
MSN5YDR335W CCR4P31384 837 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W UGA2P38067 497 aa1.45□□□□□ -2.18
MSN5YDR335W HXT6P39003 570 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W HXT7P39004 570 aa1.45□□□□□ -2.18
MSN5YDR335W LTP1P40347 161 aa1.45□□□□□ -2.18
MSN5YDR335W CCT5P40413 562 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W MPH1P40562 993 aa1.45□□□□□ -2.18
MSN5YDR335W IMA5P40884 581 aa1.45□□□□□ -2.18
MSN5YDR335W YHC3P47040 408 aa1.45□□□□□ -2.18
MSN5YDR335W UPF3P48412 387 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W BNI5P53890 448 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W EOS1P53938 366 aa1.45□□□□□ -2.18
MSN5YDR335W ARX1Q03862 593 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W DPB4Q04603 196 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W BRE4Q07660 1125 aa1.45□□□□□ -2.18
MSN5YDR335W RLP24Q07915 199 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W PML1Q07930 204 aaPredicted RBP1.45□□□□□ -2.18
MSN5YDR335W VHS3Q08438 674 aa1.45□□□□□ -2.18
MSN5YDR335W SFI1Q12369 946 aa1.45□□□□□ -2.18
MSN5YDR335W FUM1P08417 488 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W HNM1P19807 563 aa1.45□□□□□ -2.18
MSN5YDR335W CLB3P24870 427 aa1.45□□□□□ -2.18
MSN5YDR335W MSP1P28737 362 aa1.45□□□□□ -2.18
MSN5YDR335W MDL2P33311 773 aa1.45□□□□□ -2.18
MSN5YDR335W PGM1P33401 570 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W ESL2P36168 1195 aa1.45□□□□□ -2.18
MSN5YDR335W PNT1P38969 423 aa1.45□□□□□ -2.18
MSN5YDR335W YNL195CP40168 261 aa1.45□□□□□ -2.18
MSN5YDR335W BUD8P41698 603 aa1.45□□□□□ -2.18
MSN5YDR335W EXG2P52911 562 aa1.45□□□□□ -2.18
MSN5YDR335W CUE3P53137 624 aaKnown RBP1.45□□□□□ -2.18
MSN5YDR335W RAD33Q04231 177 aa1.45□□□□□ -2.18
MSN5YDR335W HLR1Q04429 423 aa1.45□□□□□ -2.18
MSN5YDR335W MRPL1Q04599 285 aa1.45□□□□□ -2.18
MSN5YDR335W VBA4Q04602 768 aaKnown RBP1.45□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms