RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB7, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB7	YDR308C	YCR061W	P25639	631 aa		4.29	□□□□□ -1.72
SRB7	YDR308C	STT3	P39007	718 aa	Known RBP	4.29	□□□□□ -1.72
SRB7	YDR308C	ESF2	P53743	316 aa	Known RBP	4.29	□□□□□ -1.72
SRB7	YDR308C	MOT3	P54785	490 aa	Known RBP	4.29	□□□□□ -1.72
SRB7	YDR308C	YPL071C	Q02864	156 aa		4.29	□□□□□ -1.72
SRB7	YDR308C	ATG21	Q02887	496 aa		4.29	□□□□□ -1.72
SRB7	YDR308C	PIF1	P07271	859 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	MIS1	P09440	975 aa	Known RBP	4.28	□□□□□ -1.72
SRB7	YDR308C	SEC18	P18759	758 aa	Known RBP	4.28	□□□□□ -1.72
SRB7	YDR308C	APN1	P22936	367 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	RIT1	P23796	513 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	ARO9	P38840	513 aa	Predicted RBP	4.28	□□□□□ -1.72
SRB7	YDR308C	XBP1	P40489	647 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	SKP2	P42843	763 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	YPL108W	Q02872	168 aa	Predicted RBP	4.28	□□□□□ -1.72
SRB7	YDR308C	PLM2	Q04383	521 aa		4.28	□□□□□ -1.72
SRB7	YDR308C	PGK1	P00560	416 aa	Known RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	PDE1	P22434	369 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	AMD2	P22580	549 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	URE2	P23202	354 aa	Known RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	PTP1	P25044	335 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	GCD7	P32502	381 aa	Predicted RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	NOP2	P40991	618 aa	Known RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	TDA10	P42938	290 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	PAP2	P53632	584 aa	Known RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	RAD33	Q04231	177 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	IWR1	Q07532	353 aa	Predicted RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	CYK3	Q07533	885 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	AIM6	Q07716	390 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	YDL242W	Q07746	117 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	ICL2	Q12031	575 aa		4.27	□□□□□ -1.73
SRB7	YDR308C	RRP6	Q12149	733 aa	Known RBP	4.27	□□□□□ -1.73
SRB7	YDR308C	CHO2	P05374	869 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	ADE3	P07245	946 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	MSS18	P08593	268 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	SIR1	P21691	654 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	PRP45	P28004	379 aa	Predicted RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	RPF2	P36160	344 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	YHL041W	P38730	149 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	FUN12	P39730	1002 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	SAP1	P39955	897 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	CIR1	P42940	261 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	YNL092W	P53934	400 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	YNL058C	P53947	316 aa		4.26	□□□□□ -1.73
SRB7	YDR308C	RDL1	Q12305	139 aa	Known RBP	4.26	□□□□□ -1.73
SRB7	YDR308C	ILV2	P07342	687 aa	Known RBP	4.25	□□□□□ -1.73
SRB7	YDR308C	MCM3	P24279	971 aa	Known RBP	4.25	□□□□□ -1.73
SRB7	YDR308C	SWI4	P25302	1093 aa	Known RBP	4.25	□□□□□ -1.73
SRB7	YDR308C	RRP43	P25359	394 aa	Predicted RBP	4.25	□□□□□ -1.73
SRB7	YDR308C	BEM3	P32873	1128 aa		4.25	□□□□□ -1.73
SRB7	YDR308C	UBX6	P47049	396 aa		4.25	□□□□□ -1.73
SRB7	YDR308C	TPO3	Q06451	622 aa		4.25	□□□□□ -1.73
SRB7	YDR308C	PNO1	Q99216	274 aa	Known RBP	4.25	□□□□□ -1.73
SRB7	YDR308C	GSY2	P27472	705 aa		4.24	□□□□□ -1.73
SRB7	YDR308C	BPL1	P48445	690 aa	Predicted RBP	4.24	□□□□□ -1.73
SRB7	YDR308C	BSP1	Q06604	576 aa		4.24	□□□□□ -1.73
SRB7	YDR308C	BRE1	Q07457	700 aa	Known RBP	4.24	□□□□□ -1.73
SRB7	YDR308C	RTC1	Q08281	1341 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	PET122	P10355	254 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	CLB4	P24871	460 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	YJU2	P28320	278 aa	Predicted RBP	4.23	□□□□□ -1.73
SRB7	YDR308C	MRPL36	P36531	177 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	SNO3	P43544	222 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	SAE2	P46946	345 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	ZAP1	P47043	880 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	CPR6	P53691	371 aa	Known RBP	4.23	□□□□□ -1.73
SRB7	YDR308C	UBX4	P54730	416 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	ERG13	P54839	491 aa	Known RBP	4.23	□□□□□ -1.73
SRB7	YDR308C	LCB4	Q12246	624 aa		4.23	□□□□□ -1.73
SRB7	YDR308C	FRD1	P32614	470 aa	Known RBP	4.22	□□□□□ -1.73
SRB7	YDR308C	SPC72	P39723	622 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	RAD26	P40352	1085 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	TPM2	P40414	161 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	NET1	P47035	1189 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	SNU56	Q03782	492 aa	Known RBP	4.22	□□□□□ -1.73
SRB7	YDR308C	HRD3	Q05787	833 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	AFT2	Q08957	416 aa		4.22	□□□□□ -1.73
SRB7	YDR308C	RVB2	Q12464	471 aa	Known RBP	4.22	□□□□□ -1.73
SRB7	YDR308C	ILS1	P09436	1072 aa	Known RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	PGI1	P12709	554 aa	Known RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	KGD2	P19262	463 aa	Predicted RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	MBR1	P23493	339 aa		4.21	□□□□□ -1.74
SRB7	YDR308C	ARP2	P32381	391 aa	Known RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	LTP1	P40347	161 aa		4.21	□□□□□ -1.74
SRB7	YDR308C	PSF2	P40359	213 aa		4.21	□□□□□ -1.74
SRB7	YDR308C	ULP2	P40537	1034 aa	Predicted RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	PRS5	Q12265	496 aa	Known RBP	4.21	□□□□□ -1.74
SRB7	YDR308C	FRE7	Q12333	620 aa		4.21	□□□□□ -1.74
SRB7	YDR308C	NUP120	P35729	1037 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	FTH1	P38310	465 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	VBA2	P38358	474 aa	Known RBP	4.2	□□□□□ -1.74
SRB7	YDR308C	VPS8	P39702	1274 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	PUG1	P40100	303 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	PSA1	P41940	361 aa	Known RBP	4.2	□□□□□ -1.74
SRB7	YDR308C	TAM41	P53230	385 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	YGR079W	P53249	370 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	STP1	Q00947	519 aa		4.2	□□□□□ -1.74
SRB7	YDR308C	MTG1	Q03151	367 aa	Predicted RBP	4.2	□□□□□ -1.74
SRB7	YDR308C	SPN1	Q06505	410 aa	Predicted RBP	4.2	□□□□□ -1.74
SRB7	YDR308C	YPL191C	Q08930	360 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms