RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C YJL206CP39529 758 aa6.39□□□□□ -1.39
VPS61YDR136C GPB2P39717 880 aa6.39□□□□□ -1.39
VPS61YDR136C VAB2P40003 282 aa6.39□□□□□ -1.39
VPS61YDR136C MND2P40577 368 aa6.39□□□□□ -1.39
VPS61YDR136C MND1P53102 219 aa6.39□□□□□ -1.39
VPS61YDR136C YSH1Q06224 779 aaPredicted RBP6.39□□□□□ -1.39
VPS61YDR136C ATG17Q06410 417 aa6.39□□□□□ -1.39
VPS61YDR136C YLL058WQ12198 575 aa6.39□□□□□ -1.39
VPS61YDR136C MDM20Q12387 796 aaKnown RBP6.39□□□□□ -1.39
VPS61YDR136C KCS1Q12494 1050 aa6.39□□□□□ -1.39
VPS61YDR136C ATP2P00830 511 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C PAB1P04147 577 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
VPS61YDR136C RPL4AP10664 362 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C ADE2P21264 571 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C TSR4P25040 408 aa6.38□□□□□ -1.39
VPS61YDR136C SAT4P25333 603 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C URA10P30402 227 aa6.38□□□□□ -1.39
VPS61YDR136C RME1P32338 300 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C MKS1P34072 584 aa6.38□□□□□ -1.39
VPS61YDR136C SRB2P34162 210 aa6.38□□□□□ -1.39
VPS61YDR136C RRP14P36080 434 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C DBP7P36120 742 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C YKR078WP36158 585 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C NOP4P37838 685 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C PHO89P38361 574 aa6.38□□□□□ -1.39
VPS61YDR136C SOH1P38633 127 aa6.38□□□□□ -1.39
VPS61YDR136C RPL4BP49626 362 aaKnown RBP6.38□□□□□ -1.39
VPS61YDR136C YGR016WP53209 190 aa6.38□□□□□ -1.39
VPS61YDR136C YTP1P53584 459 aa6.38□□□□□ -1.39
VPS61YDR136C ULP1Q02724 621 aa6.38□□□□□ -1.39
VPS61YDR136C YMR209CQ03648 457 aa6.38□□□□□ -1.39
VPS61YDR136C INP2Q03824 705 aa6.38□□□□□ -1.39
VPS61YDR136C FMP25Q08023 583 aa6.38□□□□□ -1.39
VPS61YDR136C HFI1Q12060 488 aa6.38□□□□□ -1.39
VPS61YDR136C EMP46Q12396 444 aa6.38□□□□□ -1.39
VPS61YDR136C RRP36Q12481 300 aaPredicted RBP6.38□□□□□ -1.39
VPS61YDR136C VPS5Q92331 675 aa6.38□□□□□ -1.39
VPS61YDR136C IZH4Q99393 312 aa6.38□□□□□ -1.39
VPS61YDR136C YLR278CQ05854 1341 aa6.37□□□□□ -1.39
VPS61YDR136C CDC19P00549 500 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C RPP2BP02400 110 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C ERR1P0CX10 437 aa6.37□□□□□ -1.39
VPS61YDR136C ERR2P0CX11 437 aa6.37□□□□□ -1.39
VPS61YDR136C STE6P12866 1290 aa6.37□□□□□ -1.39
VPS61YDR136C GCY1P14065 312 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
VPS61YDR136C VMA2P16140 517 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C PDC5P16467 563 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C SAN1P22470 610 aa6.37□□□□□ -1.39
VPS61YDR136C PEP12P32854 288 aa6.37□□□□□ -1.39
VPS61YDR136C LHS1P36016 881 aa6.37□□□□□ -1.39
VPS61YDR136C YHR054CP38780 354 aa6.37□□□□□ -1.39
VPS61YDR136C PDS1P40316 373 aaPredicted RBP6.37□□□□□ -1.39
VPS61YDR136C RPT2P40327 437 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C ERR3P42222 437 aa6.37□□□□□ -1.39
VPS61YDR136C IML2P47031 731 aa6.37□□□□□ -1.39
VPS61YDR136C COG2P53271 262 aa6.37□□□□□ -1.39
VPS61YDR136C YAF9P53930 226 aa6.37□□□□□ -1.39
VPS61YDR136C YMR160WQ03823 816 aa6.37□□□□□ -1.39
VPS61YDR136C SND1Q04007 877 aa6.37□□□□□ -1.39
VPS61YDR136C TAF11Q04226 346 aa6.37□□□□□ -1.39
VPS61YDR136C YMR321CQ04898 105 aa6.37□□□□□ -1.39
VPS61YDR136C ISR1Q06098 443 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C YLR455WQ06188 304 aa6.37□□□□□ -1.39
VPS61YDR136C TMA46Q12000 345 aaKnown RBP6.37□□□□□ -1.39
VPS61YDR136C HRT3Q12347 344 aa6.37□□□□□ -1.39
VPS61YDR136C ZPS1Q12512 249 aa6.37□□□□□ -1.39
VPS61YDR136C MEF1P25039 761 aa6.36□□□□□ -1.39
VPS61YDR136C GFD2P25370 566 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C VBA3P25594 458 aa6.36□□□□□ -1.39
VPS61YDR136C TFC1P32367 649 aa6.36□□□□□ -1.39
VPS61YDR136C RIM1P32445 135 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C PHA2P32452 334 aa6.36□□□□□ -1.39
VPS61YDR136C HXT3P32466 567 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C BEM3P32873 1128 aa6.36□□□□□ -1.39
VPS61YDR136C ASH1P34233 588 aa6.36□□□□□ -1.39
VPS61YDR136C YKR015CP36111 568 aa6.36□□□□□ -1.39
VPS61YDR136C VBA5P36172 582 aa6.36□□□□□ -1.39
VPS61YDR136C ABZ1P37254 787 aaPredicted RBP6.36□□□□□ -1.39
VPS61YDR136C LYS9P38999 446 aa6.36□□□□□ -1.39
VPS61YDR136C ASG7P46993 209 aa6.36□□□□□ -1.39
VPS61YDR136C YJR054WP47114 497 aa6.36□□□□□ -1.39
VPS61YDR136C RFX1P48743 811 aa6.36□□□□□ -1.39
VPS61YDR136C VMA10P48836 114 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C PSP2P50109 593 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C YGL108CP53139 140 aa6.36□□□□□ -1.39
VPS61YDR136C ELP3Q02908 557 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C RNY1Q02933 434 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C SLD5Q03406 294 aa6.36□□□□□ -1.39
VPS61YDR136C RKM2Q03942 479 aa6.36□□□□□ -1.39
VPS61YDR136C DIS3Q08162 1001 aaKnown RBP6.36□□□□□ -1.39
VPS61YDR136C AAD15Q08361 143 aa6.36□□□□□ -1.39
VPS61YDR136C THI21Q08975 551 aa6.36□□□□□ -1.39
VPS61YDR136C YPR027CQ12079 277 aa6.36□□□□□ -1.39
VPS61YDR136C STB3Q12427 513 aa6.36□□□□□ -1.39
VPS61YDR136C RGS2Q99188 309 aa6.36□□□□□ -1.39
VPS61YDR136C AMD2P22580 549 aa6.35□□□□□ -1.39
VPS61YDR136C MSH2P25847 964 aa6.35□□□□□ -1.39
VPS61YDR136C PUP2P32379 260 aa6.35□□□□□ -1.39
VPS61YDR136C FRE1P32791 686 aa6.35□□□□□ -1.39
VPS61YDR136C KES1P35844 434 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms