RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	VPS8	P39702	1274 aa		6.04	□□□□□ -1.44
RPN5	YDL147W	BSC5	P53755	489 aa		6.04	□□□□□ -1.44
RPN5	YDL147W	MTG1	Q03151	367 aa	Predicted RBP	6.04	□□□□□ -1.44
RPN5	YDL147W	PCD1	Q12524	340 aa		6.04	□□□□□ -1.44
RPN5	YDL147W	CDC16	P09798	840 aa		6.03	□□□□□ -1.44
RPN5	YDL147W	YCR061W	P25639	631 aa		6.03	□□□□□ -1.44
RPN5	YDL147W	PMI40	P29952	429 aa	Known RBP	6.03	□□□□□ -1.44
RPN5	YDL147W	CCL1	P37366	393 aa		6.03	□□□□□ -1.44
RPN5	YDL147W	SDH8	P38345	138 aa		6.03	□□□□□ -1.44
RPN5	YDL147W	GSF2	Q04697	403 aa	Known RBP	6.03	□□□□□ -1.44
RPN5	YDL147W	RKI1	Q12189	258 aa		6.03	□□□□□ -1.44
RPN5	YDL147W	ERG27	Q12452	347 aa	Known RBP	6.03	□□□□□ -1.44
RPN5	YDL147W	CDC31	P06704	161 aa	Known RBP	6.02	□□□□□ -1.45
RPN5	YDL147W	MRP7	P12687	371 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	AAC3	P18238	307 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	LOT5	P34234	306 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	PIH1	P38768	344 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	UBP5	P39944	805 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	YJR061W	P40355	935 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	YIL161W	P40449	235 aa	Known RBP	6.02	□□□□□ -1.45
RPN5	YDL147W	AIM21	P40563	679 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	ASE1	P50275	885 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	VAM6	Q07468	1049 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	NUS1	Q12063	375 aa		6.02	□□□□□ -1.45
RPN5	YDL147W	RVB2	Q12464	471 aa	Known RBP	6.02	□□□□□ -1.45
RPN5	YDL147W	SEM1	O94742	89 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-LR1	P0C2J4	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-F	P0CX61	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-GR2	P0CX62	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	SPO16	P17122	198 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-C	P25383	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	CNE1	P27825	502 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	YHL017W	P38745	532 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	PCL5	P38794	229 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	ESL1	P40456	1118 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	NDC80	P40460	691 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	YIP4	P53093	235 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	CSL4	P53859	292 aa	Predicted RBP	6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-DR2	Q03483	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	BMS1	Q08965	1183 aa	Known RBP	6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-B	Q12260	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-OR2	Q12293	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-DR1	Q12392	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-OR1	Q12439	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	PNO1	Q99216	274 aa	Known RBP	6.01	□□□□□ -1.45
RPN5	YDL147W	TY2A-DR3	Q99303	438 aa		6.01	□□□□□ -1.45
RPN5	YDL147W	PDE1	P22434	369 aa		6	□□□□□ -1.45
RPN5	YDL147W	PRE8	P23639	250 aa		6	□□□□□ -1.45
RPN5	YDL147W	TRM2	P33753	639 aa		6	□□□□□ -1.45
RPN5	YDL147W	GMH1	P36125	273 aa		6	□□□□□ -1.45
RPN5	YDL147W	GLG1	P36143	616 aa		6	□□□□□ -1.45
RPN5	YDL147W	LYS14	P40971	790 aa		6	□□□□□ -1.45
RPN5	YDL147W	UPF3	P48412	387 aa	Known RBP	6	□□□□□ -1.45
RPN5	YDL147W	SPC98	P53540	846 aa		6	□□□□□ -1.45
RPN5	YDL147W	BUD17	P53727	317 aa		6	□□□□□ -1.45
RPN5	YDL147W	NGL2	Q03264	515 aa	Known RBP	6	□□□□□ -1.45
RPN5	YDL147W	USA1	Q03714	838 aa		6	□□□□□ -1.45
RPN5	YDL147W	TRS23	Q03784	219 aa		6	□□□□□ -1.45
RPN5	YDL147W	SPC19	Q03954	165 aa		6	□□□□□ -1.45
RPN5	YDL147W	YDL073W	Q07454	984 aa		6	□□□□□ -1.45
RPN5	YDL147W	HUA2	Q12134	243 aa		6	□□□□□ -1.45
RPN5	YDL147W	YER175W-A	Q8TGU4	54 aa		6	□□□□□ -1.45
RPN5	YDL147W	LAM4	P38800	1345 aa		6	□□□□□ -1.45
RPN5	YDL147W	YPK1	P12688	680 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	CMK1	P27466	446 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	NOP4	P37838	685 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	RBG2	P53295	368 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	SNF12	P53628	566 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	SMX3	P54999	86 aa	Predicted RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	IMH1	Q06704	911 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	TMA16	Q08687	178 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	YBR255C-A	Q3E776	120 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	CDC24	P11433	854 aa	Predicted RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	URK1	P27515	501 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	CDC5	P32562	705 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	ARC1	P46672	376 aa	Known RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	TAM41	P53230	385 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	REG1	Q00816	1014 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	YMR206W	Q03695	313 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	GIR2	Q03768	265 aa	Predicted RBP	5.99	□□□□□ -1.45
RPN5	YDL147W	RCO1	Q04779	684 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	ATG23	Q06671	453 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	SDH5	Q08230	162 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	SWT1	Q12104	458 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	YOR111W	Q99210	232 aa		5.99	□□□□□ -1.45
RPN5	YDL147W	TDP1	P38319	544 aa		5.98	□□□□□ -1.45
RPN5	YDL147W	VPS4	P52917	437 aa		5.98	□□□□□ -1.45
RPN5	YDL147W	YRB30	P53107	440 aa	Predicted RBP	5.98	□□□□□ -1.45
RPN5	YDL147W	TAH18	Q12181	623 aa		5.98	□□□□□ -1.45
RPN5	YDL147W	STE4	P18851	423 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	MRP20	P32387	263 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	SIP1	P32578	815 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	UBS1	P38290	277 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	MTG2	P38860	518 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	YJL206C	P39529	758 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	LAS21	P40367	830 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	PMT6	P42934	759 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	SIP4	P46954	829 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	TIM44	Q01852	431 aa		5.97	□□□□□ -1.45
RPN5	YDL147W	GFD1	Q04839	188 aa	Known RBP	5.97	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms