RNA–Protein interactions for RNA: YDL113C

ATG20, Transcript of Sorting nexin family member, yeastyeast

Gene ATG20, Length 1,923 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG20YDL113C DIA4P38705 446 aaPredicted RBP5.36□□□□□ -1.55
ATG20YDL113C YAP1801P38856 637 aa5.36□□□□□ -1.55
ATG20YDL113C CKB2P38930 258 aa5.36□□□□□ -1.55
ATG20YDL113C LYS9P38999 446 aa5.36□□□□□ -1.55
ATG20YDL113C XDJ1P39102 459 aa5.36□□□□□ -1.55
ATG20YDL113C ERP2P39704 215 aa5.36□□□□□ -1.55
ATG20YDL113C SCC4P40090 624 aa5.36□□□□□ -1.55
ATG20YDL113C TDA10P42938 290 aa5.36□□□□□ -1.55
ATG20YDL113C YFL012WP43580 148 aa5.36□□□□□ -1.55
ATG20YDL113C RRT5P43607 289 aa5.36□□□□□ -1.55
ATG20YDL113C VTC4P47075 721 aa5.36□□□□□ -1.55
ATG20YDL113C TAH11P47112 604 aa5.36□□□□□ -1.55
ATG20YDL113C NOP13P53883 403 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
ATG20YDL113C SLU7Q02775 382 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C SVL3Q03088 825 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C SKY1Q03656 742 aa5.36□□□□□ -1.55
ATG20YDL113C ESC8Q08119 714 aa5.36□□□□□ -1.55
ATG20YDL113C YDR524C-BQ3E6R4 66 aa5.36□□□□□ -1.55
ATG20YDL113C YOL087CQ99247 1116 aa5.36□□□□□ -1.55
ATG20YDL113C IZH4Q99393 312 aa5.36□□□□□ -1.55
ATG20YDL113C CAN1P04817 590 aa5.36□□□□□ -1.55
ATG20YDL113C MOD5P07884 428 aa5.36□□□□□ -1.55
ATG20YDL113C SSC1P0CS90 654 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C PRP4P20053 465 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C BAS1P22035 811 aa5.36□□□□□ -1.55
ATG20YDL113C SIS1P25294 352 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C SQT1P35184 431 aa5.36□□□□□ -1.55
ATG20YDL113C SPC97P38863 823 aa5.36□□□□□ -1.55
ATG20YDL113C STL1P39932 569 aa5.36□□□□□ -1.55
ATG20YDL113C PIC2P40035 300 aa5.36□□□□□ -1.55
ATG20YDL113C PRK1P40494 810 aa5.36□□□□□ -1.55
ATG20YDL113C CDC1P40986 491 aa5.36□□□□□ -1.55
ATG20YDL113C VPS62P53285 467 aa5.36□□□□□ -1.55
ATG20YDL113C BIO4P53630 237 aa5.36□□□□□ -1.55
ATG20YDL113C YNL247WP53852 767 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C KTR5P53966 522 aaPredicted RBP5.36□□□□□ -1.55
ATG20YDL113C YPL109CQ02981 657 aa5.36□□□□□ -1.55
ATG20YDL113C YPQ2Q06328 317 aa5.36□□□□□ -1.55
ATG20YDL113C YET3Q07451 203 aa5.36□□□□□ -1.55
ATG20YDL113C FMP25Q08023 583 aa5.36□□□□□ -1.55
ATG20YDL113C PKH2Q12236 1081 aaKnown RBP5.36□□□□□ -1.55
ATG20YDL113C TPK1P06244 397 aa5.35□□□□□ -1.55
ATG20YDL113C ILS1P09436 1072 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C GAL11P19659 1081 aa5.35□□□□□ -1.55
ATG20YDL113C VMA3P25515 160 aa5.35□□□□□ -1.55
ATG20YDL113C POT1P27796 417 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
ATG20YDL113C MCM5P29496 775 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C CYS3P31373 394 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C PAH1P32567 862 aa5.35□□□□□ -1.55
ATG20YDL113C UTR2P32623 467 aa5.35□□□□□ -1.55
ATG20YDL113C HSP78P33416 811 aa5.35□□□□□ -1.55
ATG20YDL113C ETR1P38071 380 aa5.35□□□□□ -1.55
ATG20YDL113C YBR053CP38235 358 aa5.35□□□□□ -1.55
ATG20YDL113C SHE3P38272 425 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C YSW1P38280 609 aa5.35□□□□□ -1.55
ATG20YDL113C YBR184WP38299 523 aa5.35□□□□□ -1.55
ATG20YDL113C ESL1P40456 1118 aa5.35□□□□□ -1.55
ATG20YDL113C CNN1P43618 361 aa5.35□□□□□ -1.55
ATG20YDL113C YJR115WP47152 169 aa5.35□□□□□ -1.55
ATG20YDL113C YNL144CP53907 740 aa5.35□□□□□ -1.55
ATG20YDL113C KTR6P54070 446 aa5.35□□□□□ -1.55
ATG20YDL113C ISU1Q03020 165 aa5.35□□□□□ -1.55
ATG20YDL113C YCS4Q06156 1176 aa5.35□□□□□ -1.55
ATG20YDL113C TPO1Q07824 586 aa5.35□□□□□ -1.55
ATG20YDL113C NTG2Q08214 380 aa5.35□□□□□ -1.55
ATG20YDL113C VHS3Q08438 674 aa5.35□□□□□ -1.55
ATG20YDL113C YOR378WQ08902 515 aa5.35□□□□□ -1.55
ATG20YDL113C YLR053CQ12026 108 aa5.35□□□□□ -1.55
ATG20YDL113C YLL056CQ12177 298 aa5.35□□□□□ -1.55
ATG20YDL113C AVL9Q12500 764 aa5.35□□□□□ -1.55
ATG20YDL113C AI5_ALPHAQ9ZZX1 630 aa5.35□□□□□ -1.55
ATG20YDL113C GAL80P04387 435 aa5.35□□□□□ -1.55
ATG20YDL113C YPK1P12688 680 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C CAD1P24813 409 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C CDC10P25342 322 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C AAD3P25612 363 aa5.35□□□□□ -1.55
ATG20YDL113C SLA2P33338 968 aa5.35□□□□□ -1.55
ATG20YDL113C KES1P35844 434 aaKnown RBP5.35□□□□□ -1.55
ATG20YDL113C RRN3P36070 627 aa5.35□□□□□ -1.55
ATG20YDL113C YBR032WP38223 100 aa5.35□□□□□ -1.55
ATG20YDL113C SIF2P38262 535 aa5.35□□□□□ -1.55
ATG20YDL113C LIN1P38852 340 aaPredicted RBP5.35□□□□□ -1.55
ATG20YDL113C ECM1P39715 212 aa5.35□□□□□ -1.55
ATG20YDL113C SAE2P46946 345 aa5.35□□□□□ -1.55
ATG20YDL113C SND1Q04007 877 aa5.35□□□□□ -1.55
ATG20YDL113C SPG3Q04398 127 aaPredicted RBP5.35□□□□□ -1.55
ATG20YDL113C GPM2Q12008 311 aa5.35□□□□□ -1.55
ATG20YDL113C TAF10Q12030 206 aa5.35□□□□□ -1.55
ATG20YDL113C SRF1Q12516 437 aa5.35□□□□□ -1.55
ATG20YDL113C VPS13Q07878 3144 aa5.34□□□□□ -1.55
ATG20YDL113C GID7P25569 745 aa5.34□□□□□ -1.55
ATG20YDL113C BUD2P33314 1104 aa5.34□□□□□ -1.55
ATG20YDL113C TKL2P33315 681 aa5.34□□□□□ -1.55
ATG20YDL113C HEK2P38199 381 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
ATG20YDL113C BIT2P38346 545 aa5.34□□□□□ -1.55
ATG20YDL113C OTU2P38747 307 aaKnown RBP5.34□□□□□ -1.55
ATG20YDL113C ATM1P40416 690 aa5.34□□□□□ -1.55
ATG20YDL113C PFK26P40433 827 aaKnown RBP5.34□□□□□ -1.55
ATG20YDL113C EMW1P42842 904 aaKnown RBP5.34□□□□□ -1.55
ATG20YDL113C RFX1P48743 811 aa5.34□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms