RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W PLP2Q12017 286 aa1.86□□□□□ -2.11
TRM3YDL112W MVD1P32377 396 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W YSC83P32792 385 aa1.86□□□□□ -2.11
TRM3YDL112W AFR1P33304 620 aa1.86□□□□□ -2.11
TRM3YDL112W MNN4P36044 1178 aa1.86□□□□□ -2.11
TRM3YDL112W STT3P39007 718 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W TAF1P46677 1066 aa1.86□□□□□ -2.11
TRM3YDL112W YKE2P52553 114 aa1.86□□□□□ -2.11
TRM3YDL112W RTT102P53330 157 aa1.86□□□□□ -2.11
TRM3YDL112W GYL1Q04322 720 aa1.86□□□□□ -2.11
TRM3YDL112W RIB2Q12362 591 aaKnown RBP1.86□□□□□ -2.11
TRM3YDL112W APM4Q99186 491 aa1.86□□□□□ -2.11
TRM3YDL112W RPL22AP05749 121 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W HOM2P13663 365 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W CCL1P37366 393 aa1.85□□□□□ -2.11
TRM3YDL112W MMS4P38257 691 aa1.85□□□□□ -2.11
TRM3YDL112W YHR033WP38690 423 aa1.85□□□□□ -2.11
TRM3YDL112W FAF1P40546 346 aaPredicted RBP1.85□□□□□ -2.11
TRM3YDL112W FYV8P46949 817 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W PHO23P50947 330 aa1.85□□□□□ -2.11
TRM3YDL112W ENV11P53246 860 aa1.85□□□□□ -2.11
TRM3YDL112W YNL146WP53906 100 aa1.85□□□□□ -2.11
TRM3YDL112W SGT2Q12118 346 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W GAL80P04387 435 aa1.85□□□□□ -2.11
TRM3YDL112W TPK1P06244 397 aa1.85□□□□□ -2.11
TRM3YDL112W MTF1P14908 341 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W KGD2P19262 463 aaPredicted RBP1.85□□□□□ -2.11
TRM3YDL112W FPR1P20081 114 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W VPS25P47142 202 aa1.85□□□□□ -2.11
TRM3YDL112W PRP31P49704 494 aaPredicted RBP1.85□□□□□ -2.11
TRM3YDL112W SLG1P54867 378 aa1.85□□□□□ -2.11
TRM3YDL112W NRG1Q03125 231 aa1.85□□□□□ -2.11
TRM3YDL112W NSE5Q03718 556 aa1.85□□□□□ -2.11
TRM3YDL112W SLK19Q08581 821 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W APC5Q08683 685 aa1.85□□□□□ -2.11
TRM3YDL112W YPL150WQ12152 901 aa1.85□□□□□ -2.11
TRM3YDL112W RPC53P25441 422 aa1.85□□□□□ -2.11
TRM3YDL112W SEC65P29478 273 aa1.85□□□□□ -2.11
TRM3YDL112W IMP2'P32351 346 aa1.85□□□□□ -2.11
TRM3YDL112W TRM2P33753 639 aa1.85□□□□□ -2.11
TRM3YDL112W UBP5P39944 805 aa1.85□□□□□ -2.11
TRM3YDL112W NCS2P53923 493 aaPredicted RBP1.85□□□□□ -2.11
TRM3YDL112W YPL014WQ02606 381 aa1.85□□□□□ -2.11
TRM3YDL112W MSB2P32334 1306 aa1.85□□□□□ -2.11
TRM3YDL112W VPS13Q07878 3144 aa1.85□□□□□ -2.11
TRM3YDL112W PGI1P12709 554 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W DID4P36108 232 aa1.85□□□□□ -2.11
TRM3YDL112W YTA12P40341 825 aa1.85□□□□□ -2.11
TRM3YDL112W GCN5Q03330 439 aa1.85□□□□□ -2.11
TRM3YDL112W YMR210WQ03649 449 aa1.85□□□□□ -2.11
TRM3YDL112W YDR338CQ05497 695 aa1.85□□□□□ -2.11
TRM3YDL112W DON1Q05610 365 aa1.85□□□□□ -2.11
TRM3YDL112W ATG33Q06485 197 aa1.85□□□□□ -2.11
TRM3YDL112W CDA1Q06702 301 aa1.85□□□□□ -2.11
TRM3YDL112W PKH2Q12236 1081 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W PDH1Q12428 516 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W MEX67Q99257 599 aaKnown RBP1.85□□□□□ -2.11
TRM3YDL112W FAB1P34756 2278 aa1.84□□□□□ -2.11
TRM3YDL112W ILV1P00927 576 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W RFT1P38206 574 aaPredicted RBP1.84□□□□□ -2.11
TRM3YDL112W PFA3P42836 336 aa1.84□□□□□ -2.11
TRM3YDL112W RCR2Q03446 210 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W SND1Q04007 877 aa1.84□□□□□ -2.11
TRM3YDL112W HFD1Q04458 532 aa1.84□□□□□ -2.11
TRM3YDL112W ESC8Q08119 714 aa1.84□□□□□ -2.11
TRM3YDL112W CLP1Q08685 445 aaPredicted RBP1.84□□□□□ -2.11
TRM3YDL112W GET3Q12154 354 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W GIS3Q12418 502 aa1.84□□□□□ -2.11
TRM3YDL112W SMC6Q12749 1114 aa1.84□□□□□ -2.11
TRM3YDL112W SSB1P11484 613 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W HSL7P38274 827 aa1.84□□□□□ -2.11
TRM3YDL112W SSB2P40150 613 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W POL31P46957 487 aa1.84□□□□□ -2.11
TRM3YDL112W BNA2P47125 453 aa1.84□□□□□ -2.11
TRM3YDL112W ALG11P53954 548 aaKnown RBP1.84□□□□□ -2.11
TRM3YDL112W ECM38Q05902 660 aaPredicted RBP1.84□□□□□ -2.11
TRM3YDL112W YDL057WQ07379 328 aa1.84□□□□□ -2.11
TRM3YDL112W MCH5Q08777 521 aa1.84□□□□□ -2.11
TRM3YDL112W YLR149CQ99296 730 aa1.84□□□□□ -2.11
TRM3YDL112W YEL076C-AP0CX16 216 aa1.84□□□□□ -2.12
TRM3YDL112W YLR464WP0CX17 216 aa1.84□□□□□ -2.12
TRM3YDL112W REV1P12689 985 aa1.84□□□□□ -2.12
TRM3YDL112W NAT1P12945 854 aaKnown RBP1.84□□□□□ -2.12
TRM3YDL112W PFK1P16861 987 aaKnown RBP1.84□□□□□ -2.12
TRM3YDL112W YKL097CP34245 136 aa1.84□□□□□ -2.12
TRM3YDL112W TSA1P34760 196 aaKnown RBP1.84□□□□□ -2.12
TRM3YDL112W YEL076CP39971 216 aa1.84□□□□□ -2.12
TRM3YDL112W SPC105P53148 917 aa1.84□□□□□ -2.12
TRM3YDL112W STP1Q00947 519 aa1.84□□□□□ -2.12
TRM3YDL112W VTC3Q02725 835 aa1.84□□□□□ -2.12
TRM3YDL112W TRS130Q03660 1102 aa1.84□□□□□ -2.12
TRM3YDL112W AIM33Q04516 312 aa1.84□□□□□ -2.12
TRM3YDL112W YML053CQ04978 212 aa1.84□□□□□ -2.12
TRM3YDL112W RLP24Q07915 199 aaKnown RBP1.84□□□□□ -2.12
TRM3YDL112W TCO89Q08921 799 aa1.84□□□□□ -2.12
TRM3YDL112W BMH1P29311 267 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W ATG19P35193 415 aa1.83□□□□□ -2.12
TRM3YDL112W TIF5P38431 405 aaKnown RBP1.83□□□□□ -2.12
TRM3YDL112W SIP3P38717 1229 aa1.83□□□□□ -2.12
TRM3YDL112W AIM39Q08223 395 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms