RNA–Protein interactions for RNA: YCR017C

CWH43, Transcript of Putative sensor/transporter protein involved in cell wall biogenesis, yeast

Gene CWH43, Length 2,862 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWH43	YCR017C	COQ6	P53318	479 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	CWC2	Q12046	339 aa	Predicted RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	GTT2	Q12390	233 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	DAL81	P21657	970 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	PHO84	P25297	587 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	ADD66	P36040	267 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	SHM1	P37292	490 aa	Predicted RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	GDH3	P39708	457 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	RPT2	P40327	437 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	AIR1	P40507	360 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	DJP1	P40564	432 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	STU2	P46675	888 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	BUD13	P46947	266 aa	Predicted RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	SNG1	P46950	547 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	PCL10	P53124	433 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	HST3	P53687	447 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	MTG1	Q03151	367 aa	Predicted RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	RRP6	Q12149	733 aa	Known RBP	4.08	□□□□□ -1.76
CWH43	YCR017C	YLL056C	Q12177	298 aa		4.08	□□□□□ -1.76
CWH43	YCR017C	HIS1	P00498	297 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	SEC65	P29478	273 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	YIL054W	P40524	105 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	CCH1	P50077	2039 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	STR3	P53101	465 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	MAL13	P53338	473 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	POB3	Q04636	552 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	RRN11	Q04712	507 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	NUT2	Q06213	157 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	TRE2	Q08693	809 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	SRO7	Q12038	1033 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	RPS6A	P0CX37	236 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	RPS6B	P0CX38	236 aa	Predicted RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	POL30	P15873	258 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	KAR9	P32526	644 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	YBL055C	P34220	418 aa	Predicted RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	TMN3	P40071	706 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	YFR018C	P43599	363 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	COQ5	P49017	307 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	KAP114	P53067	1004 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	NMA2	P53204	395 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	EFM6	P53970	246 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	YMR187C	Q03236	431 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	CEF1	Q03654	590 aa	Predicted RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	PPN1	Q04119	674 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	SPG3	Q04398	127 aa	Predicted RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	CMS1	Q07897	291 aa	Known RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	FAP7	Q12055	197 aa	Predicted RBP	4.07	□□□□□ -1.76
CWH43	YCR017C	ATG9	Q12142	997 aa		4.07	□□□□□ -1.76
CWH43	YCR017C	CCR4	P31384	837 aa	Known RBP	4.06	□□□□□ -1.76
CWH43	YCR017C	TFB1	P32776	642 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YEL075C	P39972	122 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YER158C	P40095	573 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	MEP1	P40260	492 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	EFM4	P40516	257 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	ERG10	P41338	398 aa	Known RBP	4.06	□□□□□ -1.76
CWH43	YCR017C	KTR6	P54070	446 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YPL113C	Q02961	396 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	UME1	Q03010	460 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	RKM2	Q03942	479 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	HBT1	Q07653	1046 aa	Known RBP	4.06	□□□□□ -1.76
CWH43	YCR017C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
CWH43	YCR017C	SPO12	P17123	173 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	MRPL8	P22353	238 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	LIP5	P32875	414 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	HIS2	P38635	335 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YHR078W	P38799	552 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	STN1	P38960	494 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	TAT2	P38967	592 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YER189W	P40104	122 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	MKT1	P40850	830 aa	Known RBP	4.06	□□□□□ -1.76
CWH43	YCR017C	MAD1	P40957	749 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	SIP4	P46954	829 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	RTA1	P53047	317 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	TEP1	P53916	434 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	YNL040W	P53960	456 aa	Predicted RBP	4.06	□□□□□ -1.76
CWH43	YCR017C	SLT2	Q00772	484 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	MCD1	Q12158	566 aa		4.06	□□□□□ -1.76
CWH43	YCR017C	MET16	P18408	261 aa	Predicted RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	CAP1	P28495	268 aa	Known RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	PMT1	P33775	817 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	KTR4	P38131	464 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	GIP1	P38229	639 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	YSW1	P38280	609 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	ATG3	P40344	310 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	ASG1	P40467	964 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	MDJ2	P42834	146 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	PET130	P47065	347 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	TAN1	P53072	289 aa	Predicted RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	VMS1	Q04311	632 aa	Known RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	UFO1	Q04511	668 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	BLS1	Q06071	122 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	LDB18	Q07887	179 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	SIL1	Q08199	421 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	NDD1	Q08887	554 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	TRX1	P22217	103 aa	Known RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	RAD57	P25301	460 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	CDC3	P32457	520 aa	Known RBP	4.05	□□□□□ -1.76
CWH43	YCR017C	CBF2	P32504	956 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	SMI1	P32566	505 aa		4.05	□□□□□ -1.76
CWH43	YCR017C	PEX5	P35056	612 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 1005 ms