RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	TOK1	P40310	691 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	NDC80	P40460	691 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	SAD1	P43589	448 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	MET12	P46151	657 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	VPS62	P53285	467 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	MAL13	P53338	473 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	RIP-Chip
ROX3	YBL093C	TRS130	Q03660	1102 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	ADY3	Q07732	790 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	SFI1	Q12369	946 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	HIF1	Q12373	385 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	GIS3	Q12418	502 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	NOP58	Q12499	511 aa	Known RBP	5.68	□□□□□ -1.5
ROX3	YBL093C	ATG11	Q12527	1178 aa		5.68	□□□□□ -1.5
ROX3	YBL093C	SNF1	P06782	633 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	NAT1	P12945	854 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	RFA1	P22336	621 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	SRB4	P32569	687 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	VID24	P38263	362 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	SMF1	P38925	575 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	SKP2	P42843	763 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	DAS1	P47005	663 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	YGR021W	P53212	290 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	BTN2	P53286	410 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	BRE5	P53741	515 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	DUS1	P53759	423 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	RPA49	Q01080	415 aa	Predicted RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	IWR1	Q07532	353 aa	Predicted RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	NOP12	Q08208	459 aa	Known RBP	5.67	□□□□□ -1.5
ROX3	YBL093C	HFI1	Q12060	488 aa		5.67	□□□□□ -1.5
ROX3	YBL093C	COX4	P04037	155 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	HIS5	P07172	385 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	CDC33	P07260	213 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	WHI2	P12611	486 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	SNA3	P14359	133 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	DAL2	P25335	343 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	PAP1	P29468	568 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	SWI3	P32591	825 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	YEL043W	P32618	956 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	MRX3	P38172	270 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	MMS4	P38257	691 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	YBR238C	P38330	731 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	AFG3	P39925	761 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	FTR1	P40088	404 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	RIP-Chip
ROX3	YBL093C	CPR7	P47103	393 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	RAI1	P53063	387 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	KAP114	P53067	1004 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	DAK1	P54838	584 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	DIG1	Q03063	452 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	YAP6	Q03935	383 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	POB3	Q04636	552 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	ESC8	Q08119	714 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	SUT2	Q12286	268 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	ZPS1	Q12512	249 aa		5.66	□□□□□ -1.5
ROX3	YBL093C	NOP14	Q99207	810 aa	Known RBP	5.66	□□□□□ -1.5
ROX3	YBL093C	CAN1	P04817	590 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	SPE1	P08432	466 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	MSD1	P15179	658 aa	Known RBP	5.65	□□□□□ -1.5
ROX3	YBL093C	GAL11	P19659	1081 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	RNR1	P21524	888 aa	Known RBP	5.65	□□□□□ -1.5
ROX3	YBL093C	SEC21	P32074	935 aa	Known RBP	5.65	□□□□□ -1.5
ROX3	YBL093C	MSS51	P32335	436 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	CSG2	P35206	410 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	YKL050C	P35736	922 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
ROX3	YBL093C	AIM21	P40563	679 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	NCS6	P53088	359 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	YLR224W	Q05947	369 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	RMP1	Q12530	201 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	AI5_BETA	Q9ZZX0	354 aa		5.65	□□□□□ -1.5
ROX3	YBL093C	RPS3	P05750	240 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	RPL4A	P10664	362 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	TOP3	P13099	656 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	GFA1	P14742	717 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	GLN3	P18494	730 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	COX11	P19516	300 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	RRP1	P35178	278 aa	Predicted RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	BLI1	P35727	113 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	YTA12	P40341	825 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	PSF2	P40359	213 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	UBP6	P43593	499 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	CHA4	P43634	648 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	PHO86	P46956	311 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	ZAP1	P47043	880 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	RPL4B	P49626	362 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	PRP31	P49704	494 aa	Predicted RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	PUS2	P53167	370 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	CLU1	Q03690	1277 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	RRB1	Q04225	511 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	YMR018W	Q04364	514 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	YMR114C	Q04471	368 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	SHS1	Q07657	551 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	SGT2	Q12118	346 aa	Known RBP	5.64	□□□□□ -1.51
ROX3	YBL093C	RTP1	Q12751	981 aa		5.64	□□□□□ -1.51
ROX3	YBL093C	ASP3-2	P0CX77	362 aa		5.63	□□□□□ -1.51
ROX3	YBL093C	ASP3-3	P0CX78	362 aa		5.63	□□□□□ -1.51
ROX3	YBL093C	ASP3-4	P0CX79	362 aa		5.63	□□□□□ -1.51
ROX3	YBL093C	ASP3-1	P0CZ17	362 aa		5.63	□□□□□ -1.51
ROX3	YBL093C	RRT12	P25381	491 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms