RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W ARG4P04076 463 aaPredicted RBP3.56□□□□□ -1.84
NUP60YAR002W SPS1P08458 490 aa3.56□□□□□ -1.84
NUP60YAR002W COX11P19516 300 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W KIN82P25341 720 aa3.56□□□□□ -1.84
NUP60YAR002W YUR1P26725 428 aa3.56□□□□□ -1.84
NUP60YAR002W CAP1P28495 268 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W PUB1P32588 453 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
NUP60YAR002W YBL055CP34220 418 aaPredicted RBP3.56□□□□□ -1.84
NUP60YAR002W VID24P38263 362 aa3.56□□□□□ -1.84
NUP60YAR002W TIF5P38431 405 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W CCT2P39076 527 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W RSP5P39940 809 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W ASG1P40467 964 aa3.56□□□□□ -1.84
NUP60YAR002W SEC26P41810 973 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W SCD6P45978 349 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
NUP60YAR002W PSP2P50109 593 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W DRN1P53255 507 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W RPL22BP56628 122 aaKnown RBP3.56□□□□□ -1.84
NUP60YAR002W TRS130Q03660 1102 aa3.56□□□□□ -1.84
NUP60YAR002W ECM7Q06200 448 aa3.56□□□□□ -1.84
NUP60YAR002W HIF1Q12373 385 aa3.56□□□□□ -1.84
NUP60YAR002W ECM3Q99252 613 aa3.56□□□□□ -1.84
NUP60YAR002W BI2P03873 423 aa3.55□□□□□ -1.84
NUP60YAR002W BI4P03879 638 aa3.55□□□□□ -1.84
NUP60YAR002W ADE8P04161 214 aa3.55□□□□□ -1.84
NUP60YAR002W ADE3P07245 946 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W ADH4P10127 382 aa3.55□□□□□ -1.84
NUP60YAR002W PYC1P11154 1178 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W PEP5P12868 1029 aa3.55□□□□□ -1.84
NUP60YAR002W GAL11P19659 1081 aa3.55□□□□□ -1.84
NUP60YAR002W SFL1P20134 766 aa3.55□□□□□ -1.84
NUP60YAR002W PRE10P21242 288 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
NUP60YAR002W RRT12P25381 491 aa3.55□□□□□ -1.84
NUP60YAR002W PLC1P32383 869 aa3.55□□□□□ -1.84
NUP60YAR002W CDC12P32468 407 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W TMT1P32643 299 aa3.55□□□□□ -1.84
NUP60YAR002W RGT1P32862 1170 aa3.55□□□□□ -1.84
NUP60YAR002W OMA1P36163 345 aa3.55□□□□□ -1.84
NUP60YAR002W PBP2P38151 413 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
NUP60YAR002W MMS4P38257 691 aa3.55□□□□□ -1.84
NUP60YAR002W MSG5P38590 489 aa3.55□□□□□ -1.84
NUP60YAR002W PMC1P38929 1173 aaPredicted RBP3.55□□□□□ -1.84
NUP60YAR002W SAH1P39954 449 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W SIT1P39980 628 aa3.55□□□□□ -1.84
NUP60YAR002W SMX2P40204 77 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W INA22P40576 216 aa3.55□□□□□ -1.84
NUP60YAR002W SAP185P40856 1058 aa3.55□□□□□ -1.84
NUP60YAR002W TRS85P46944 698 aa3.55□□□□□ -1.84
NUP60YAR002W DAS1P47005 663 aa3.55□□□□□ -1.84
NUP60YAR002W SCS3P53012 380 aa3.55□□□□□ -1.84
NUP60YAR002W MNP1P53163 194 aaPredicted RBP3.55□□□□□ -1.84
NUP60YAR002W PUS2P53167 370 aa3.55□□□□□ -1.84
NUP60YAR002W ORC3P54790 616 aa3.55□□□□□ -1.84
NUP60YAR002W SDH1Q00711 640 aa3.55□□□□□ -1.84
NUP60YAR002W YMR102CQ03177 834 aa3.55□□□□□ -1.84
NUP60YAR002W UFO1Q04511 668 aa3.55□□□□□ -1.84
NUP60YAR002W SHS1Q07657 551 aa3.55□□□□□ -1.84
NUP60YAR002W ABP140Q08641 628 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W HFI1Q12060 488 aa3.55□□□□□ -1.84
NUP60YAR002W TY3A-GQ12173 290 aa3.55□□□□□ -1.84
NUP60YAR002W SVS1Q12254 260 aa3.55□□□□□ -1.84
NUP60YAR002W TY3A-IQ99219 290 aa3.55□□□□□ -1.84
NUP60YAR002W SEY1Q99287 776 aa3.55□□□□□ -1.84
NUP60YAR002W BI3Q9ZZW7 517 aa3.55□□□□□ -1.84
NUP60YAR002W PMS1P14242 873 aa3.55□□□□□ -1.84
NUP60YAR002W SPO16P17122 198 aa3.55□□□□□ -1.84
NUP60YAR002W ILV6P25605 309 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W HBS1P32769 611 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W YME1P32795 747 aa3.55□□□□□ -1.84
NUP60YAR002W GYP6P32806 458 aa3.55□□□□□ -1.84
NUP60YAR002W LIP5P32875 414 aa3.55□□□□□ -1.84
NUP60YAR002W TIM23P32897 222 aa3.55□□□□□ -1.84
NUP60YAR002W SKG6P32900 734 aaPredicted RBP3.55□□□□□ -1.84
NUP60YAR002W SEG2P34250 1132 aa3.55□□□□□ -1.84
NUP60YAR002W OAF3P36023 863 aa3.55□□□□□ -1.84
NUP60YAR002W YKL151CP36059 337 aa3.55□□□□□ -1.84
NUP60YAR002W FLR1P38124 548 aa3.55□□□□□ -1.84
NUP60YAR002W VHC1P38329 1120 aa3.55□□□□□ -1.84
NUP60YAR002W AIM21P40563 679 aa3.55□□□□□ -1.84
NUP60YAR002W ATG36P46983 293 aa3.55□□□□□ -1.84
NUP60YAR002W URB2P47108 1174 aa3.55□□□□□ -1.84
NUP60YAR002W CPR6P53691 371 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W NOG2P53742 486 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W USA1Q03714 838 aa3.55□□□□□ -1.84
NUP60YAR002W BRE4Q07660 1125 aa3.55□□□□□ -1.84
NUP60YAR002W LPX1Q12405 387 aaKnown RBP3.55□□□□□ -1.84
NUP60YAR002W GAL10P04397 699 aa3.54□□□□□ -1.84
NUP60YAR002W CAN1P04817 590 aa3.54□□□□□ -1.84
NUP60YAR002W RPB2P08518 1224 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W YML002WP0CF17 737 aa3.54□□□□□ -1.84
NUP60YAR002W ASP3-2P0CX77 362 aa3.54□□□□□ -1.84
NUP60YAR002W ASP3-3P0CX78 362 aa3.54□□□□□ -1.84
NUP60YAR002W ASP3-4P0CX79 362 aa3.54□□□□□ -1.84
NUP60YAR002W ASP3-1P0CZ17 362 aa3.54□□□□□ -1.84
NUP60YAR002W RPL4AP10664 362 aaKnown RBP3.54□□□□□ -1.84
NUP60YAR002W MAS2P11914 482 aa3.54□□□□□ -1.84
NUP60YAR002W POX1P13711 748 aa3.54□□□□□ -1.84
NUP60YAR002W KAR3P17119 729 aa3.54□□□□□ -1.84
NUP60YAR002W EST1P17214 699 aaPredicted RBP3.54□□□□□ -1.84
NUP60YAR002W GPI10P30777 616 aa3.54□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 50.5 ms