RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Spag11Q8K4N2 71 aa13.65□□□□□ -0.22
Ebf3-204ENSMUST00000169486 Fstl3Q9EQC7 256 aa13.65□□□□□ -0.22
Ebf3-204ENSMUST00000169486 Spg11Q3UHA3 2430 aa13.65□□□□□ -0.22
Ebf3-204ENSMUST00000169486 Rif1Q6PR54 2419 aaKnown RBP13.65□□□□□ -0.22
Ebf3-204ENSMUST00000169486 Tmem14cQ9CQN6 114 aa13.65□□□□□ -0.22
Ebf3-204ENSMUST00000169486 Trav4n-4A0A075B615 110 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 LeprotO89013 131 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P01658 132 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Ighv3-6P18531 116 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Pglyrp4Q0VB07 374 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Gm15294V9GXA7 121 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 SrcapA0A087WQ44 3271 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Igkv4-53A0A0G2JFC6 119 aa13.64□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Gm20708H3BKF4 155 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Mrps12O35680 139 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Cox6b1P56391 86 aaKnown RBP13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 A530064D06RikQ8BNV8 229 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Ly6g5bQ8K1T4 194 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Rasl10aQ8K5A4 203 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Pear1Q8VIK5 1034 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Prr12E9PYL2 2035 aaKnown RBP13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Lamtor3O88653 124 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Igkv4-68A0A0B4J1I7 117 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Cd99Q8VCN6 175 aa13.63□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P06330 118 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Cspg4Q8VHY0 2327 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Gm2564F6Z9S8 108 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Ccl19O70460 108 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P04942 107 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Vwc2lQ505H4 222 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Socs3O35718 225 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P01741 114 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Gm10604Q3V0X7 143 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Spink10Q8CAC8 162 aa13.62□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Iglv1A0A075B663 117 aa13.61□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Lyzl4Q9D925 145 aa13.61□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Igkv4-57-1A0A075B5M4 119 aa13.61□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Plscr4P58196 326 aa13.61□□□□□ -0.23
Ebf3-204ENSMUST00000169486 E130218I03RikA0A0U1RNU5 63 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Defb26Q30KN7 186 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Defa21Q8C1P2 93 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Spink12Q9D256 87 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Leap2Q91V13 76 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Mrpl55Q9CZ83 127 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Tax1bp3Q9DBG9 124 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Cmc4Q61908 68 aa13.6□□□□□ -0.23
Ebf3-204ENSMUST00000169486 NbasE9Q411 2356 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Nxph4G3X9N5 304 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Gm815Q3UWS2 115 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Vmo1Q5SXG7 201 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 4930415O20RikQ8CDT5 131 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Igkv8-24A0A140T8P5 121 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P01630 113 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 5730522E02RikQ5SP45 163 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Hoxd3P09027 433 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P01756 117 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 P01757 117 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Cox7cP17665 63 aa13.59□□□□□ -0.23
Ebf3-204ENSMUST00000169486 Ighv1-74A0A0G2JGK2 117 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Igkv6-13A0A0G2JGY3 119 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Taf15Q8BQ46 557 aaKnown RBP13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm17324Q8C6J8 137 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Ociad2Q9D8W7 154 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm17359A0A0G2JEB7 487 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Defa27F2Z403 93 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 B230307C23RikQ8BLB2 64 aa13.58□□□□□ -0.24
Ebf3-204ENSMUST00000169486 PtprsB0V2N1 1907 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Anapc1P53995 1944 aaKnown RBP13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Ighv3-4A0A0A6YXF1 117 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 MplkipQ9D011 178 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Col8a2P25318 699 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Rmi2Q3UPE3 149 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Ighv1-64A0A075B5X3 117 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Dph3Q8K0W9 82 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 4930442H23RikQ9D5G7 103 aa13.57□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Dennd4cA6H8H2 1906 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Nckap5E9QAE1 1909 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm17455G3UW87 128 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 P01738 130 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 NpyP57774 97 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Cox11Q6P8I6 275 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm20730A0A075B5J6 119 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Ighv1-77A0A0G2JGS9 117 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Defb47Q30KN1 79 aa13.56□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gp9O88186 177 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Crip1P63254 77 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Synj2bpQ9D6K5 145 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Tmem263Q9DAM7 115 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Trav9d-4A0A0G2JG37 103 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 MsmpB1AWI6 139 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm20499D3Z4G5 72 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Trbv14A0A140T8L9 115 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm7257D3YX25 99 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Gm9970F6ZED4 185 aa13.55□□□□□ -0.24
Ebf3-204ENSMUST00000169486 P01786 117 aa13.54□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Mapk1ip1lQ8BH93 242 aa13.54□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Dscaml1Q4VA61 2053 aa13.54□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Prp2P05143 317 aa13.54□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Defb29Q8BGW9 78 aa13.54□□□□□ -0.24
Ebf3-204ENSMUST00000169486 Spry4Q9WTP2 300 aa13.54□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms