RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Nf1Q04690 2841 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gm45753A0A1C7CYU8 86 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ins2P01326 110 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Rpl24Q8BP67 157 aaKnown RBP13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gtsf1lQ9CWD0 151 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 1520401A03RikA0A0J9YVH6 598 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 1700056E22RikF7CNM6 234 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 P01725 110 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Lmo4P61969 165 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Odf3l1Q810P2 275 aa13.61□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ighv1-80A0A075B5Y3 117 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gm28044L7N1X0 119 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 MsmbO08540 113 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Olfr498Q8VEW2 330 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Mrpl36Q99N90 102 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Vsig4F6TUL9 280 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gm9242J3QNY1 357 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ndufa4l2Q4FZG9 87 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Rasl11bQ922H7 247 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gm10271F6WY25 52 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Mtatp8P03930 67 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Tmem97Q8VD00 176 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 OtorQ9JIE3 128 aa13.6□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ighv1-4A0A075B5T4 117 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Zfp248Q640N4 576 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Spcs1Q9D958 161 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Muc2Q80Z19 2680 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Tspo2Q9CRZ8 162 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ndufa11Q9D8B4 141 aa13.59□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Ighv5-8A0A075B676 92 aa13.58□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Trav7-2Q5R1I3 112 aa13.58□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Obox1Q9D350 204 aa13.58□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Pla2g2dQ9WVF6 144 aa13.58□□□□□ -0.23
Ptpra-201ENSMUST00000028769 Gm5294J3QP53 216 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Msrb2Q78J03 175 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Igkv4-57-1A0A075B5M4 119 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gm15557A6PWY0 234 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gpx7Q99LJ6 186 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ube2tQ9CQ37 204 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Tmem89Q9DA04 169 aa13.58□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Tdgf1P51865 171 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Foxc2Q61850 494 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Spag11Q8K4N2 71 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ighv1-22A0A075B5U7 117 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 P01747 120 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Fgf6P21658 208 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Foxi1Q922I5 372 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Arid1bE9Q4N7 2244 aa13.57□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ighv2-6A0A075B6A7 116 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Igkv4-59A0A0B4J1I8 117 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Htr1dQ61224 374 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Q9CX63 252 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Trbv17A0A140T8P8 114 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Brd3osA0A1B0GRB6 84 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 TshbP12656 138 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 P18527 97 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Tex26Q0VB26 296 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Sec11aQ9R0P6 179 aa13.56□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ighv1-9A0A0A6YW37 117 aa13.55□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Cnn3Q9DAW9 330 aaKnown RBP13.55□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Mrps12O35680 139 aa13.55□□□□□ -0.24
Ptpra-201ENSMUST00000028769 7420426K07RikQ3UX66 186 aa13.55□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ndufc2Q9CQ54 120 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 4930447F04RikA2AFR2 126 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Tmem170bP86050 132 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ly6g5bQ8K1T4 194 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gm10553J3QPF1 123 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 PolP10400 120 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Hspe1Q64433 102 aaKnown RBP13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Tctex1d4Q8CDY7 219 aa13.54□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gm12057A0A087WR21 115 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 H2al2bA9Z055 111 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Olfr312Q7TRZ9 308 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gm17334Q8C6U3 126 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 A130051J06RikQ8CAU1 227 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Hectd1Q69ZR2 2618 aaKnown RBP13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Ighv3-1A0A075B5S6 116 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Gm20517G3UVU6 152 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 SbpP15501 199 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Slc16a4Q8R0M8 500 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 3110018I06RikQ9CXS0 120 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Myo18bE9PV66 2605 aa13.53□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Adrb3P25962 400 aa13.52□□□□□ -0.24
Ptpra-201ENSMUST00000028769 Rif1Q6PR54 2419 aaKnown RBP13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Igkv2-137A0A0B4J1H6 120 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Csn3P06796 181 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Hist1h1tQ07133 208 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Olfr311Q5NC59 308 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Pxt1Q8K459 51 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Gm26938S4R185 226 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Obox8V9GWY9 217 aa13.52□□□□□ -0.25
Ptpra-201ENSMUST00000028769 PlnP61014 52 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 AW146154Q3TPQ7 468 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Dpm3Q9D1Q4 92 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Ighv1-23A0A0A6YVW3 117 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 P04219 140 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Cby1Q9D1C2 127 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Defa3P28310 93 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Defa10P50708 93 aa13.51□□□□□ -0.25
Ptpra-201ENSMUST00000028769 Defa15P50713 93 aa13.51□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms