RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 XIRP2A4UGR9 3374 aa0.32□□□□□ -2.36
SHCBP1-206ENST00000567698 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 HTTP42858 3142 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 MKI67P46013 3256 aaKnown RBP0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 VPS13CQ709C8 3753 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 KRTAP6-2Q3LI66 62 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 MYO15AQ9UKN7 3530 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 FAT1Q14517 4588 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 FREM2Q5SZK8 3169 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
SHCBP1-206ENST00000567698 LRP1BQ9NZR2 4599 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 GOLGB1Q14789 3259 aaKnown RBP0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 ATMQ13315 3056 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 MAST4O15021 2626 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 CSMD2Q7Z408 3487 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 DEFB4AO15263 64 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 MYO9AB2RTY4 2548 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
SHCBP1-206ENST00000567698 PRUNE2Q8WUY3 3088 aa0.29□□□□□ -2.36
SHCBP1-206ENST00000567698 BRCA2P51587 3418 aa0.29□□□□□ -2.36
SHCBP1-206ENST00000567698 LAMA2P24043 3122 aaKnown RBP0.29□□□□□ -2.36
SHCBP1-206ENST00000567698 DCHS1Q96JQ0 3298 aa0.29□□□□□ -2.36
SHCBP1-206ENST00000567698 WDFY3Q8IZQ1 3526 aa0.29□□□□□ -2.36
SHCBP1-206ENST00000567698 SPEGQ15772 3267 aa0.28□□□□□ -2.36
SHCBP1-206ENST00000567698 COL6A3P12111 3177 aa0.28□□□□□ -2.36
SHCBP1-206ENST00000567698 KRTAP19-8Q3LI54 63 aa0.28□□□□□ -2.36
SHCBP1-206ENST00000567698 LRP2P98164 4655 aa0.28□□□□□ -2.36
SHCBP1-206ENST00000567698 EP400Q96L91 3159 aa0.28□□□□□ -2.37
SHCBP1-206ENST00000567698 C5orf42Q9H799 3197 aa0.28□□□□□ -2.37
SHCBP1-206ENST00000567698 CDH23Q9H251 3354 aa0.28□□□□□ -2.37
SHCBP1-206ENST00000567698 LAMA1P25391 3075 aa0.27□□□□□ -2.37
SHCBP1-206ENST00000567698 HERC1Q15751 4861 aa0.27□□□□□ -2.37
SHCBP1-206ENST00000567698 MT1XP80297 61 aa0.26□□□□□ -2.37
SHCBP1-206ENST00000567698 DNHD1Q96M86 4753 aa0.25□□□□□ -2.37
SHCBP1-206ENST00000567698 PCNTO95613 3336 aa0.25□□□□□ -2.37
SHCBP1-206ENST00000567698 KMT2DO14686 5537 aa0.25□□□□□ -2.37
SHCBP1-206ENST00000567698 VCANP13611 3396 aa0.24□□□□□ -2.37
SHCBP1-206ENST00000567698 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
SHCBP1-206ENST00000567698 MT2AP02795 61 aa0.24□□□□□ -2.37
SHCBP1-206ENST00000567698 CENPFP49454 3210 aa0.23□□□□□ -2.37
SHCBP1-206ENST00000567698 DNAH14Q0VDD8 3507 aa0.23□□□□□ -2.37
SHCBP1-206ENST00000567698 MT1HL1P0DM35 61 aa0.23□□□□□ -2.37
SHCBP1-206ENST00000567698 MT1MQ8N339 61 aa0.23□□□□□ -2.37
SHCBP1-206ENST00000567698 UNC80Q8N2C7 3258 aa0.23□□□□□ -2.37
SHCBP1-206ENST00000567698 EYSQ5T1H1 3165 aa0.22□□□□□ -2.37
SHCBP1-206ENST00000567698 ADGRG4Q8IZF6 3080 aa0.22□□□□□ -2.37
SHCBP1-206ENST00000567698 PCLOQ9Y6V0 5065 aa0.22□□□□□ -2.37
SHCBP1-206ENST00000567698 UBR4Q5T4S7 5183 aa0.22□□□□□ -2.37
SHCBP1-206ENST00000567698 MT1GP13640 62 aa0.22□□□□□ -2.37
SHCBP1-206ENST00000567698 KMT2CQ8NEZ4 4911 aaKnown RBP0.21□□□□□ -2.38
SHCBP1-206ENST00000567698 BIRC6Q9NR09 4857 aa0.21□□□□□ -2.38
SHCBP1-206ENST00000567698 KRTAP19-7Q3SYF9 63 aa0.21□□□□□ -2.38
SHCBP1-206ENST00000567698 RYR3Q15413 4870 aa0.21□□□□□ -2.38
SHCBP1-206ENST00000567698 HYDINQ4G0P3 5121 aa0.21□□□□□ -2.38
SHCBP1-206ENST00000567698 MUC2Q02817 5179 aa0.2□□□□□ -2.38
SHCBP1-206ENST00000567698 HERC2O95714 4834 aa0.2□□□□□ -2.38
SHCBP1-206ENST00000567698 USH2AO75445 5202 aa0.19□□□□□ -2.38
SHCBP1-206ENST00000567698 MT1FP04733 61 aa0.19□□□□□ -2.38
SHCBP1-206ENST00000567698 RYR2Q92736 4967 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 RYR1P21817 5038 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 SSPOA2VEC9 5147 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 EPPK1P58107 5090 aaKnown RBP0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 KRTAP19-2Q3LHN2 52 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 ABCA13Q86UQ4 5058 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 RNF213Q63HN8 5207 aa0.18□□□□□ -2.38
SHCBP1-206ENST00000567698 MT1BP07438 61 aa0.17□□□□□ -2.38
SHCBP1-206ENST00000567698 KIAA1109Q2LD37 5005 aa0.17□□□□□ -2.38
SHCBP1-206ENST00000567698 NEBP20929 6669 aa0.16□□□□□ -2.38
SHCBP1-206ENST00000567698 DSTQ03001 7570 aaKnown RBP0.16□□□□□ -2.38
SHCBP1-206ENST00000567698 FSIP2Q5CZC0 6907 aa0.15□□□□□ -2.39
SHCBP1-206ENST00000567698 SYNE2Q8WXH0 6885 aaKnown RBP0.15□□□□□ -2.39
SHCBP1-206ENST00000567698 KRTAP6-1Q3LI64 71 aa0.14□□□□□ -2.39
SHCBP1-206ENST00000567698 MUC12Q9UKN1 5478 aa0.13□□□□□ -2.39
SHCBP1-206ENST00000567698 MT4P47944 62 aa0.07□□□□□ -2.4
SHCBP1-206ENST00000567698 KRTAP19-6Q3LI70 58 aa0.04□□□□□ -2.4
SHCBP1-206ENST00000567698 KRTAP20-1Q3LI63 56 aa0.02□□□□□ -2.41
SHCBP1-206ENST00000567698 KRTAP20-2Q3LI61 65 aa0□□□□□ -2.41
Retrieved 78 of 20,778 RNA–protein pairs in 147.2 ms