RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 PKHD1L1Q86WI1 4243 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH10Q8IVF4 4471 aa0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 ANK3Q12955 4377 aaKnown RBP0.38□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH9Q9NYC9 4486 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 PKD1P98161 4303 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH17Q9UFH2 4485 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH2Q9P225 4427 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 HSPG2P98160 4391 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 ZNF469Q96JG9 3925 aaPredicted RBP0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 ANK2Q01484 3957 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 TRRAPQ9Y4A5 3859 aa0.37□□□□□ -2.35
RNU4-42P-201ENST00000364738 VPS13CQ709C8 3753 aa0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 DNAH6Q9C0G6 4158 aa0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 MT1XP80297 61 aa0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 KRTAP21-1Q3LI58 79 aa0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 HECTD4Q9Y4D8 3996 aa0.36□□□□□ -2.35
RNU4-42P-201ENST00000364738 KRTAP19-2Q3LHN2 52 aa0.35□□□□□ -2.35
RNU4-42P-201ENST00000364738 LPAP08519 4548 aa0.35□□□□□ -2.35
RNU4-42P-201ENST00000364738 MUC5ACP98088 5654 aa0.34□□□□□ -2.35
RNU4-42P-201ENST00000364738 FAT2Q9NYQ8 4349 aa0.34□□□□□ -2.35
RNU4-42P-201ENST00000364738 MDN1Q9NU22 5596 aa0.33□□□□□ -2.36
RNU4-42P-201ENST00000364738 DNAH7Q8WXX0 4024 aa0.33□□□□□ -2.36
RNU4-42P-201ENST00000364738 MT1BP07438 61 aa0.32□□□□□ -2.36
RNU4-42P-201ENST00000364738 KRTAP19-7Q3SYF9 63 aa0.32□□□□□ -2.36
RNU4-42P-201ENST00000364738 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
RNU4-42P-201ENST00000364738 SYNE1Q8NF91 8797 aaKnown RBP0.32□□□□□ -2.36
RNU4-42P-201ENST00000364738 MT1GP13640 62 aa0.31□□□□□ -2.36
RNU4-42P-201ENST00000364738 APOBP04114 4563 aaKnown RBP0.31□□□□□ -2.36
RNU4-42P-201ENST00000364738 FAT3Q8TDW7 4589 aa0.31□□□□□ -2.36
RNU4-42P-201ENST00000364738 STARD9Q9P2P6 4700 aa0.3□□□□□ -2.36
RNU4-42P-201ENST00000364738 MT2AP02795 61 aa0.3□□□□□ -2.36
RNU4-42P-201ENST00000364738 MT1MQ8N339 61 aa0.3□□□□□ -2.36
RNU4-42P-201ENST00000364738 DNAH5Q8TE73 4624 aa0.29□□□□□ -2.36
RNU4-42P-201ENST00000364738 PKHD1P08F94 4074 aa0.28□□□□□ -2.36
RNU4-42P-201ENST00000364738 MT1HL1P0DM35 61 aa0.28□□□□□ -2.36
RNU4-42P-201ENST00000364738 DYNC1H1Q14204 4646 aaKnown RBP0.28□□□□□ -2.36
RNU4-42P-201ENST00000364738 MUC17Q685J3 4493 aa0.28□□□□□ -2.37
RNU4-42P-201ENST00000364738 MT1FP04733 61 aa0.27□□□□□ -2.37
RNU4-42P-201ENST00000364738 KRTAP6-1Q3LI64 71 aa0.27□□□□□ -2.37
RNU4-42P-201ENST00000364738 FAT1Q14517 4588 aa0.26□□□□□ -2.37
RNU4-42P-201ENST00000364738 LRP1BQ9NZR2 4599 aa0.26□□□□□ -2.37
RNU4-42P-201ENST00000364738 PLECQ15149 4684 aaKnown RBP0.25□□□□□ -2.37
RNU4-42P-201ENST00000364738 KMT2DO14686 5537 aa0.25□□□□□ -2.37
RNU4-42P-201ENST00000364738 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
RNU4-42P-201ENST00000364738 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
RNU4-42P-201ENST00000364738 MUC2Q02817 5179 aa0.19□□□□□ -2.38
RNU4-42P-201ENST00000364738 LRP2P98164 4655 aa0.18□□□□□ -2.38
RNU4-42P-201ENST00000364738 HERC1Q15751 4861 aa0.16□□□□□ -2.38
RNU4-42P-201ENST00000364738 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
RNU4-42P-201ENST00000364738 KRTAP19-6Q3LI70 58 aa0.13□□□□□ -2.39
RNU4-42P-201ENST00000364738 MT4P47944 62 aa0.11□□□□□ -2.39
RNU4-42P-201ENST00000364738 FAT4Q6V0I7 4981 aa0.11□□□□□ -2.39
RNU4-42P-201ENST00000364738 KMT2CQ8NEZ4 4911 aaKnown RBP0.11□□□□□ -2.39
RNU4-42P-201ENST00000364738 PCLOQ9Y6V0 5065 aa0.1□□□□□ -2.39
RNU4-42P-201ENST00000364738 USH2AO75445 5202 aa0.1□□□□□ -2.39
RNU4-42P-201ENST00000364738 KRTAP20-2Q3LI61 65 aa0.09□□□□□ -2.4
RNU4-42P-201ENST00000364738 RYR3Q15413 4870 aa0.09□□□□□ -2.4
RNU4-42P-201ENST00000364738 DNHD1Q96M86 4753 aa0.08□□□□□ -2.4
RNU4-42P-201ENST00000364738 RNF213Q63HN8 5207 aa0.07□□□□□ -2.4
RNU4-42P-201ENST00000364738 UBR4Q5T4S7 5183 aa0.07□□□□□ -2.4
RNU4-42P-201ENST00000364738 HERC2O95714 4834 aa0.07□□□□□ -2.4
RNU4-42P-201ENST00000364738 BIRC6Q9NR09 4857 aa0.07□□□□□ -2.4
RNU4-42P-201ENST00000364738 HYDINQ4G0P3 5121 aa0.07□□□□□ -2.4
RNU4-42P-201ENST00000364738 DSTQ03001 7570 aaKnown RBP0.05□□□□□ -2.4
RNU4-42P-201ENST00000364738 KRTAP20-1Q3LI63 56 aa0.04□□□□□ -2.4
RNU4-42P-201ENST00000364738 RYR1P21817 5038 aa0.03□□□□□ -2.4
RNU4-42P-201ENST00000364738 KIAA1109Q2LD37 5005 aa-0□□□□□ -2.41
RNU4-42P-201ENST00000364738 MUC12Q9UKN1 5478 aa-0□□□□□ -2.41
RNU4-42P-201ENST00000364738 EPPK1P58107 5090 aaKnown RBP-0.01□□□□□ -2.41
RNU4-42P-201ENST00000364738 SYNE2Q8WXH0 6885 aaKnown RBP-0.02□□□□□ -2.41
RNU4-42P-201ENST00000364738 ABCA13Q86UQ4 5058 aa-0.02□□□□□ -2.41
RNU4-42P-201ENST00000364738 GPR98Q8WXG9 6306 aa-0.02□□□□□ -2.41
RNU4-42P-201ENST00000364738 RYR2Q92736 4967 aa-0.03□□□□□ -2.41
RNU4-42P-201ENST00000364738 FSIP2Q5CZC0 6907 aa-0.07□□□□□ -2.42
RNU4-42P-201ENST00000364738 NEBP20929 6669 aa-0.11□□□□□ -2.43
RNU4-42P-201ENST00000364738 MACF1Q9UPN3 7388 aaKnown RBP-0.12□□□□□ -2.43
Retrieved 77 of 20,778 RNA–protein pairs in 13.5 ms