RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	HYDIN	Q4G0P3	5121 aa		4.07	□□□□□ -1.76
HNRNPU-223	ENST00000640001	ADM2	Q7Z4H4	148 aa		4.07	□□□□□ -1.76
HNRNPU-223	ENST00000640001	KRTAP3-1	Q9BYR8	98 aa		4.03	□□□□□ -1.76
HNRNPU-223	ENST00000640001	ROMO1	P60602	79 aa		4.03	□□□□□ -1.76
HNRNPU-223	ENST00000640001	VPS13B	Q7Z7G8	4022 aa		4.03	□□□□□ -1.77
HNRNPU-223	ENST00000640001	SEC61B	P60468	96 aa	Known RBP	4.01	□□□□□ -1.77
HNRNPU-223	ENST00000640001		H0YAA0	97 aa		3.99	□□□□□ -1.77
HNRNPU-223	ENST00000640001	SACS	Q9NZJ4	4579 aa		3.99	□□□□□ -1.77
HNRNPU-223	ENST00000640001	FAT2	Q9NYQ8	4349 aa		3.97	□□□□□ -1.77
HNRNPU-223	ENST00000640001	KRTAP25-1	Q3LHN0	102 aa		3.97	□□□□□ -1.77
HNRNPU-223	ENST00000640001	PKHD1	P08F94	4074 aa		3.96	□□□□□ -1.78
HNRNPU-223	ENST00000640001	MT1HL1	P0DM35	61 aa		3.95	□□□□□ -1.78
HNRNPU-223	ENST00000640001	TPRXL	Q17RH7	258 aa		3.95	□□□□□ -1.78
HNRNPU-223	ENST00000640001	PLAC4	Q8WY50	150 aa		3.93	□□□□□ -1.78
HNRNPU-223	ENST00000640001	PKD1	P98161	4303 aa		3.93	□□□□□ -1.78
HNRNPU-223	ENST00000640001		R4GN34	69 aa		3.93	□□□□□ -1.78
HNRNPU-223	ENST00000640001	APOB	P04114	4563 aa	Known RBP	3.91	□□□□□ -1.78
HNRNPU-223	ENST00000640001		M0QZ58	72 aa		3.91	□□□□□ -1.78
HNRNPU-223	ENST00000640001		P0C880	135 aa		3.9	□□□□□ -1.78
HNRNPU-223	ENST00000640001	RYR2	Q92736	4967 aa		3.9	□□□□□ -1.78
HNRNPU-223	ENST00000640001	KRTAP4-5	Q9BYR2	181 aa		3.89	□□□□□ -1.79
HNRNPU-223	ENST00000640001	KIAA1109	Q2LD37	5005 aa		3.88	□□□□□ -1.79
HNRNPU-223	ENST00000640001	LRP1	Q07954	4544 aa	Known RBP	3.88	□□□□□ -1.79
HNRNPU-223	ENST00000640001	KMT2C	Q8NEZ4	4911 aa	Known RBP	3.87	□□□□□ -1.79
HNRNPU-223	ENST00000640001	MYCBP2	O75592	4640 aa		3.85	□□□□□ -1.79
HNRNPU-223	ENST00000640001	KRTAP17-1	Q9BYP8	105 aa		3.84	□□□□□ -1.79
HNRNPU-223	ENST00000640001	RYR3	Q15413	4870 aa		3.84	□□□□□ -1.8
HNRNPU-223	ENST00000640001	RYR1	P21817	5038 aa		3.83	□□□□□ -1.8
HNRNPU-223	ENST00000640001		M0R2T5	61 aa		3.82	□□□□□ -1.8
HNRNPU-223	ENST00000640001	KRTAP10-6	P60371	365 aa	Predicted RBP	3.82	□□□□□ -1.8
HNRNPU-223	ENST00000640001	KRTAP13-4	Q3LI77	160 aa		3.81	□□□□□ -1.8
HNRNPU-223	ENST00000640001	C10orf95	Q9H7T3	257 aa		3.78	□□□□□ -1.8
HNRNPU-223	ENST00000640001	HSPG2	P98160	4391 aa		3.75	□□□□□ -1.81
HNRNPU-223	ENST00000640001	FAT3	Q8TDW7	4589 aa		3.75	□□□□□ -1.81
HNRNPU-223	ENST00000640001	KRTAP12-2	P59991	146 aa		3.74	□□□□□ -1.81
HNRNPU-223	ENST00000640001	KRTAP12-1	P59990	96 aa		3.7	□□□□□ -1.82
HNRNPU-223	ENST00000640001	PKHD1L1	Q86WI1	4243 aa		3.67	□□□□□ -1.82
HNRNPU-223	ENST00000640001	LRP2	P98164	4655 aa		3.65	□□□□□ -1.83
HNRNPU-223	ENST00000640001	EPPK1	P58107	5090 aa	Known RBP	3.65	□□□□□ -1.83
HNRNPU-223	ENST00000640001	TNXB	P22105	4242 aa		3.64	□□□□□ -1.83
HNRNPU-223	ENST00000640001	KRTAP4-1	Q9BYQ7	146 aa		3.64	□□□□□ -1.83
HNRNPU-223	ENST00000640001	PP632	Q6XCG6	107 aa		3.6	□□□□□ -1.83
HNRNPU-223	ENST00000640001	HERC2	O95714	4834 aa		3.59	□□□□□ -1.84
HNRNPU-223	ENST00000640001	TNP1	P09430	55 aa		3.58	□□□□□ -1.84
HNRNPU-223	ENST00000640001	LOR	P23490	312 aa	Predicted RBP	3.58	□□□□□ -1.84
HNRNPU-223	ENST00000640001	LPA	P08519	4548 aa		3.58	□□□□□ -1.84
HNRNPU-223	ENST00000640001	KRTAP10-10	P60014	251 aa		3.54	□□□□□ -1.84
HNRNPU-223	ENST00000640001	LCE2B	O14633	110 aa		3.54	□□□□□ -1.84
HNRNPU-223	ENST00000640001	ABCA13	Q86UQ4	5058 aa		3.53	□□□□□ -1.85
HNRNPU-223	ENST00000640001	BIRC6	Q9NR09	4857 aa		3.47	□□□□□ -1.85
HNRNPU-223	ENST00000640001	HERC1	Q15751	4861 aa		3.34	□□□□□ -1.87
HNRNPU-223	ENST00000640001	KRTAP19-2	Q3LHN2	52 aa		3.34	□□□□□ -1.87
HNRNPU-223	ENST00000640001	MT1H	P80294	61 aa		3.34	□□□□□ -1.88
HNRNPU-223	ENST00000640001	MUC2	Q02817	5179 aa		3.33	□□□□□ -1.88
HNRNPU-223	ENST00000640001	KRTAP15-1	Q3LI76	137 aa		3.33	□□□□□ -1.88
HNRNPU-223	ENST00000640001	PCLO	Q9Y6V0	5065 aa		3.29	□□□□□ -1.88
HNRNPU-223	ENST00000640001	MT2A	P02795	61 aa		3.28	□□□□□ -1.88
HNRNPU-223	ENST00000640001	LCE2C	Q5TA81	110 aa		3.28	□□□□□ -1.88
HNRNPU-223	ENST00000640001	MUC17	Q685J3	4493 aa		3.28	□□□□□ -1.88
HNRNPU-223	ENST00000640001	MT1F	P04733	61 aa		3.27	□□□□□ -1.89
HNRNPU-223	ENST00000640001	PRO2289	Q9P1D8	64 aa		3.26	□□□□□ -1.89
HNRNPU-223	ENST00000640001	SPRR2G	Q9BYE4	73 aa		3.26	□□□□□ -1.89
HNRNPU-223	ENST00000640001	HMCN2	Q8NDA2	5059 aa		3.24	□□□□□ -1.89
HNRNPU-223	ENST00000640001	FLG	P20930	4061 aa	Predicted RBP	3.24	□□□□□ -1.89
HNRNPU-223	ENST00000640001	KRTAP19-1	Q8IUB9	90 aa		3.23	□□□□□ -1.89
HNRNPU-223	ENST00000640001	FAT4	Q6V0I7	4981 aa		3.22	□□□□□ -1.89
HNRNPU-223	ENST00000640001	RNF213	Q63HN8	5207 aa		3.22	□□□□□ -1.89
HNRNPU-223	ENST00000640001	LCE2A	Q5TA79	106 aa	Predicted RBP	3.21	□□□□□ -1.89
HNRNPU-223	ENST00000640001	LCE3A	Q5TA76	89 aa		3.21	□□□□□ -1.9
HNRNPU-223	ENST00000640001	UBR4	Q5T4S7	5183 aa		3.2	□□□□□ -1.9
HNRNPU-223	ENST00000640001	INE1	O15225	51 aa		3.19	□□□□□ -1.9
HNRNPU-223	ENST00000640001	KRTAP10-12	P60413	245 aa		3.17	□□□□□ -1.9
HNRNPU-223	ENST00000640001	KRTAP9-8	Q9BYQ0	159 aa		3.16	□□□□□ -1.9
HNRNPU-223	ENST00000640001	KRTAP23-1	A1A580	65 aa		3.16	□□□□□ -1.9
HNRNPU-223	ENST00000640001	LOC100996750	A0A140TA64	210 aa		3.14	□□□□□ -1.91
HNRNPU-223	ENST00000640001	KRTAP4-6	Q9BYQ5	205 aa		3.14	□□□□□ -1.91
HNRNPU-223	ENST00000640001	KRTAP12-3	P60328	96 aa		3.1	□□□□□ -1.91
HNRNPU-223	ENST00000640001	KRTAP19-8	Q3LI54	63 aa		3.1	□□□□□ -1.91
HNRNPU-223	ENST00000640001	MT1B	P07438	61 aa		3.08	□□□□□ -1.92
HNRNPU-223	ENST00000640001	MT1X	P80297	61 aa		3.05	□□□□□ -1.92
HNRNPU-223	ENST00000640001	KRTAP10-5	P60370	271 aa		3.04	□□□□□ -1.92
HNRNPU-223	ENST00000640001	KRTAP9-3	Q9BYQ3	159 aa		3.04	□□□□□ -1.92
HNRNPU-223	ENST00000640001	KRTAP10-7	P60409	375 aa	Predicted RBP	3.02	□□□□□ -1.93
HNRNPU-223	ENST00000640001	KRTAP8-1	Q8IUC2	63 aa		3	□□□□□ -1.93
HNRNPU-223	ENST00000640001	KRTAP19-5	Q3LI72	72 aa		2.94	□□□□□ -1.94
HNRNPU-223	ENST00000640001	CRCT1	Q9UGL9	99 aa		2.94	□□□□□ -1.94
HNRNPU-223	ENST00000640001	LCE3B	Q5TA77	95 aa		2.91	□□□□□ -1.94
HNRNPU-223	ENST00000640001	KRTAP4-8	A0A0G2JLE6	195 aa		2.89	□□□□□ -1.95
HNRNPU-223	ENST00000640001	KRTAP4-8	Q9BYQ9	185 aa		2.89	□□□□□ -1.95
HNRNPU-223	ENST00000640001	SPRR5	A0A1B0GTR4	108 aa		2.88	□□□□□ -1.95
HNRNPU-223	ENST00000640001	FSIP2	Q5CZC0	6907 aa		2.88	□□□□□ -1.95
HNRNPU-223	ENST00000640001	SYNE1	Q8NF91	8797 aa	Known RBP	2.87	□□□□□ -1.95
HNRNPU-223	ENST00000640001	KRTAP9-6	A0A140TA67	174 aa		2.86	□□□□□ -1.95
HNRNPU-223	ENST00000640001	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	2.86	□□□□□ -1.95
HNRNPU-223	ENST00000640001	KRTAP9-2	Q9BYQ4	174 aa		2.85	□□□□□ -1.95
HNRNPU-223	ENST00000640001	USH2A	O75445	5202 aa		2.84	□□□□□ -1.96
HNRNPU-223	ENST00000640001	LCE3C	Q5T5A8	94 aa		2.83	□□□□□ -1.96
HNRNPU-223	ENST00000640001	KMT2D	O14686	5537 aa		2.74	□□□□□ -1.97
HNRNPU-223	ENST00000640001	KRTAP4-7	Q9BYR0	210 aa		2.73	□□□□□ -1.97
HNRNPU-223	ENST00000640001	OBSCN	Q5VST9	7968 aa		2.71	□□□□□ -1.97

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