RNA–Protein interactions for RNA: ENST00000639955.1

NECAP1-221, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NECAP1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-221ENST00000639955 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
NECAP1-221ENST00000639955 SACSQ9NZJ4 4579 aa4.1□□□□□ -1.75
NECAP1-221ENST00000639955 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
NECAP1-221ENST00000639955 H1FX-AS1Q4G0G2 97 aa4.07□□□□□ -1.76
NECAP1-221ENST00000639955 Q5VSD8 79 aa4.05□□□□□ -1.76
NECAP1-221ENST00000639955 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
NECAP1-221ENST00000639955 KIAA1109Q2LD37 5005 aa4.03□□□□□ -1.76
NECAP1-221ENST00000639955 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
NECAP1-221ENST00000639955 A0A1B0GVY2 172 aa4□□□□□ -1.77
NECAP1-221ENST00000639955 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
NECAP1-221ENST00000639955 TPRXLQ17RH7 258 aa3.99□□□□□ -1.77
NECAP1-221ENST00000639955 HSPG2P98160 4391 aa3.98□□□□□ -1.77
NECAP1-221ENST00000639955 RPS29P62273 56 aaKnown RBP3.97□□□□□ -1.77
NECAP1-221ENST00000639955 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
NECAP1-221ENST00000639955 S4R3F8 94 aa3.97□□□□□ -1.77
NECAP1-221ENST00000639955 RYR3Q15413 4870 aa3.97□□□□□ -1.77
NECAP1-221ENST00000639955 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
NECAP1-221ENST00000639955 XP32Q5T750 250 aa3.96□□□□□ -1.78
NECAP1-221ENST00000639955 RYR1P21817 5038 aa3.95□□□□□ -1.78
NECAP1-221ENST00000639955 RYR2Q92736 4967 aa3.94□□□□□ -1.78
NECAP1-221ENST00000639955 LRP2P98164 4655 aa3.94□□□□□ -1.78
NECAP1-221ENST00000639955 LPAP08519 4548 aa3.93□□□□□ -1.78
NECAP1-221ENST00000639955 PKHD1L1Q86WI1 4243 aa3.93□□□□□ -1.78
NECAP1-221ENST00000639955 KRTAP17-1Q9BYP8 105 aa3.93□□□□□ -1.78
NECAP1-221ENST00000639955 RPL37P61927 97 aaKnown RBP3.92□□□□□ -1.78
NECAP1-221ENST00000639955 SEC61BP60468 96 aaKnown RBP3.91□□□□□ -1.78
NECAP1-221ENST00000639955 KRTAP10-6P60371 365 aaPredicted RBP3.9□□□□□ -1.79
NECAP1-221ENST00000639955 KRTAP3-3Q9BYR6 98 aa3.9□□□□□ -1.79
NECAP1-221ENST00000639955 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
NECAP1-221ENST00000639955 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
NECAP1-221ENST00000639955 KRTAP3-2Q9BYR7 98 aa3.84□□□□□ -1.79
NECAP1-221ENST00000639955 M0QZ58 72 aa3.82□□□□□ -1.8
NECAP1-221ENST00000639955 ABCA13Q86UQ4 5058 aa3.82□□□□□ -1.8
NECAP1-221ENST00000639955 KRTAP4-5Q9BYR2 181 aa3.82□□□□□ -1.8
NECAP1-221ENST00000639955 MT1HL1P0DM35 61 aa3.8□□□□□ -1.8
NECAP1-221ENST00000639955 TNXBP22105 4242 aa3.79□□□□□ -1.8
NECAP1-221ENST00000639955 R4GN34 69 aa3.78□□□□□ -1.8
NECAP1-221ENST00000639955 J3QL48 77 aa3.77□□□□□ -1.81
NECAP1-221ENST00000639955 MUC2Q02817 5179 aa3.76□□□□□ -1.81
NECAP1-221ENST00000639955 KRTAP12-1P59990 96 aa3.75□□□□□ -1.81
NECAP1-221ENST00000639955 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
NECAP1-221ENST00000639955 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
NECAP1-221ENST00000639955 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
NECAP1-221ENST00000639955 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
NECAP1-221ENST00000639955 HERC2O95714 4834 aa3.62□□□□□ -1.83
NECAP1-221ENST00000639955 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
NECAP1-221ENST00000639955 BIRC6Q9NR09 4857 aa3.59□□□□□ -1.83
NECAP1-221ENST00000639955 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.83
NECAP1-221ENST00000639955 HERC1Q15751 4861 aa3.55□□□□□ -1.84
NECAP1-221ENST00000639955 M0R2T5 61 aa3.54□□□□□ -1.84
NECAP1-221ENST00000639955 RNF213Q63HN8 5207 aa3.53□□□□□ -1.84
NECAP1-221ENST00000639955 PCLOQ9Y6V0 5065 aa3.53□□□□□ -1.84
NECAP1-221ENST00000639955 MUC17Q685J3 4493 aa3.47□□□□□ -1.85
NECAP1-221ENST00000639955 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
NECAP1-221ENST00000639955 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.87
NECAP1-221ENST00000639955 TNP1P09430 55 aa3.38□□□□□ -1.87
NECAP1-221ENST00000639955 HMCN2Q8NDA2 5059 aa3.37□□□□□ -1.87
NECAP1-221ENST00000639955 KRTAP19-2Q3LHN2 52 aa3.35□□□□□ -1.87
NECAP1-221ENST00000639955 KRTAP10-10P60014 251 aa3.34□□□□□ -1.88
NECAP1-221ENST00000639955 PP632Q6XCG6 107 aa3.28□□□□□ -1.88
NECAP1-221ENST00000639955 FLGP20930 4061 aaPredicted RBP3.27□□□□□ -1.89
NECAP1-221ENST00000639955 LCE3AQ5TA76 89 aa3.23□□□□□ -1.89
NECAP1-221ENST00000639955 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
NECAP1-221ENST00000639955 USH2AO75445 5202 aa3.21□□□□□ -1.9
NECAP1-221ENST00000639955 MT1FP04733 61 aa3.21□□□□□ -1.9
NECAP1-221ENST00000639955 KRTAP19-1Q8IUB9 90 aa3.21□□□□□ -1.9
NECAP1-221ENST00000639955 INE1O15225 51 aa3.2□□□□□ -1.9
NECAP1-221ENST00000639955 MT1HP80294 61 aa3.2□□□□□ -1.9
NECAP1-221ENST00000639955 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
NECAP1-221ENST00000639955 MT2AP02795 61 aa3.17□□□□□ -1.9
NECAP1-221ENST00000639955 KMT2DO14686 5537 aa3.15□□□□□ -1.9
NECAP1-221ENST00000639955 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.91
NECAP1-221ENST00000639955 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
NECAP1-221ENST00000639955 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
NECAP1-221ENST00000639955 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
NECAP1-221ENST00000639955 KRTAP10-7P60409 375 aaPredicted RBP3.06□□□□□ -1.92
NECAP1-221ENST00000639955 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
NECAP1-221ENST00000639955 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
NECAP1-221ENST00000639955 MT1BP07438 61 aa3.03□□□□□ -1.92
NECAP1-221ENST00000639955 KRTAP9-2Q9BYQ4 174 aa3.03□□□□□ -1.92
NECAP1-221ENST00000639955 MT1XP80297 61 aa3.03□□□□□ -1.92
NECAP1-221ENST00000639955 KRTAP10-5P60370 271 aa3.02□□□□□ -1.93
NECAP1-221ENST00000639955 KRTAP4-8A0A0G2JLE6 195 aa2.96□□□□□ -1.93
NECAP1-221ENST00000639955 KRTAP4-8Q9BYQ9 185 aa2.96□□□□□ -1.93
NECAP1-221ENST00000639955 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
NECAP1-221ENST00000639955 KRTAP8-1Q8IUC2 63 aa2.95□□□□□ -1.94
NECAP1-221ENST00000639955 KRTAP19-8Q3LI54 63 aa2.94□□□□□ -1.94
NECAP1-221ENST00000639955 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
NECAP1-221ENST00000639955 KRTAP9-3Q9BYQ3 159 aa2.92□□□□□ -1.94
NECAP1-221ENST00000639955 LCE2BO14633 110 aa2.9□□□□□ -1.94
NECAP1-221ENST00000639955 DSTQ03001 7570 aaKnown RBP2.9□□□□□ -1.95
NECAP1-221ENST00000639955 KRTAP4-7Q9BYR0 210 aa2.89□□□□□ -1.95
NECAP1-221ENST00000639955 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
NECAP1-221ENST00000639955 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.96
NECAP1-221ENST00000639955 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
NECAP1-221ENST00000639955 LCE2AQ5TA79 106 aaPredicted RBP2.82□□□□□ -1.96
NECAP1-221ENST00000639955 FCGBPQ9Y6R7 5405 aaPredicted RBP2.81□□□□□ -1.96
NECAP1-221ENST00000639955 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
NECAP1-221ENST00000639955 MUC12Q9UKN1 5478 aa2.77□□□□□ -1.97
NECAP1-221ENST00000639955 KRTAP9-6A8MVA2 160 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms