RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 ABCA13Q86UQ4 5058 aa2.2□□□□□ -2.06
TCF4-290ENST00000638154 KRTAP19-4Q3LI73 84 aa2.2□□□□□ -2.06
TCF4-290ENST00000638154 MXRA5Q9NR99 2828 aa2.2□□□□□ -2.06
TCF4-290ENST00000638154 DNHD1Q96M86 4753 aa2.18□□□□□ -2.06
TCF4-290ENST00000638154 NIPBLQ6KC79 2804 aaeCLIP2.18□□□□□ -2.06
TCF4-290ENST00000638154 PKD1L1Q8TDX9 2849 aa2.17□□□□□ -2.06
TCF4-290ENST00000638154 CMYA5Q8N3K9 4069 aa2.17□□□□□ -2.06
TCF4-290ENST00000638154 MT3P25713 68 aa2.16□□□□□ -2.06
TCF4-290ENST00000638154 TRRAPQ9Y4A5 3859 aa2.16□□□□□ -2.06
TCF4-290ENST00000638154 FRAS1Q86XX4 4008 aa2.15□□□□□ -2.07
TCF4-290ENST00000638154 KRTAP10-4P60372 401 aaPredicted RBP2.15□□□□□ -2.07
TCF4-290ENST00000638154 LCE2CQ5TA81 110 aa2.13□□□□□ -2.07
TCF4-290ENST00000638154 HERC2O95714 4834 aa2.13□□□□□ -2.07
TCF4-290ENST00000638154 ANK2Q01484 3957 aa2.12□□□□□ -2.07
TCF4-290ENST00000638154 CSMD3Q7Z407 3707 aa2.12□□□□□ -2.07
TCF4-290ENST00000638154 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
TCF4-290ENST00000638154 KRTAP10-7P60409 375 aaPredicted RBP2.11□□□□□ -2.07
TCF4-290ENST00000638154 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
TCF4-290ENST00000638154 LORP23490 312 aaPredicted RBP2.1□□□□□ -2.07
TCF4-290ENST00000638154 LYSTQ99698 3801 aa2.09□□□□□ -2.07
TCF4-290ENST00000638154 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
TCF4-290ENST00000638154 FBN1P35555 2871 aaKnown RBP2.09□□□□□ -2.08
TCF4-290ENST00000638154 FBN2P35556 2912 aa2.08□□□□□ -2.08
TCF4-290ENST00000638154 LOC100996750A0A140TA64 210 aa2.06□□□□□ -2.08
TCF4-290ENST00000638154 KRTAP4-6Q9BYQ5 205 aa2.06□□□□□ -2.08
TCF4-290ENST00000638154 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
TCF4-290ENST00000638154 SSPOA2VEC9 5147 aa2.04□□□□□ -2.08
TCF4-290ENST00000638154 ZNF469Q96JG9 3925 aaPredicted RBP2.04□□□□□ -2.08
TCF4-290ENST00000638154 MUC2Q02817 5179 aa2.01□□□□□ -2.09
TCF4-290ENST00000638154 DNAH7Q8WXX0 4024 aa2.01□□□□□ -2.09
TCF4-290ENST00000638154 VWFP04275 2813 aa2□□□□□ -2.09
TCF4-290ENST00000638154 LCE3CQ5T5A8 94 aa2□□□□□ -2.09
TCF4-290ENST00000638154 FBN3Q75N90 2809 aa1.98□□□□□ -2.09
TCF4-290ENST00000638154 LCE2BO14633 110 aa1.97□□□□□ -2.09
TCF4-290ENST00000638154 RNF213Q63HN8 5207 aa1.96□□□□□ -2.1
TCF4-290ENST00000638154 PRKDCP78527 4128 aaKnown RBP1.96□□□□□ -2.1
TCF4-290ENST00000638154 DNAH6Q9C0G6 4158 aa1.95□□□□□ -2.1
TCF4-290ENST00000638154 DNAH3Q8TD57 4116 aa1.93□□□□□ -2.1
TCF4-290ENST00000638154 LCE2AQ5TA79 106 aaPredicted RBP1.92□□□□□ -2.1
TCF4-290ENST00000638154 PRM1P04553 51 aa1.91□□□□□ -2.1
TCF4-290ENST00000638154 KMT2AQ03164 3969 aa1.89□□□□□ -2.11
TCF4-290ENST00000638154 DNAH8Q96JB1 4490 aa1.89□□□□□ -2.11
TCF4-290ENST00000638154 HECTD4Q9Y4D8 3996 aa1.89□□□□□ -2.11
TCF4-290ENST00000638154 LCE3BQ5TA77 95 aa1.88□□□□□ -2.11
TCF4-290ENST00000638154 KRTAP19-5Q3LI72 72 aa1.87□□□□□ -2.11
TCF4-290ENST00000638154 FAT3Q8TDW7 4589 aa1.87□□□□□ -2.11
TCF4-290ENST00000638154 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
TCF4-290ENST00000638154 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
TCF4-290ENST00000638154 DNAH2Q9P225 4427 aa1.85□□□□□ -2.11
TCF4-290ENST00000638154 VPS13BQ7Z7G8 4022 aa1.83□□□□□ -2.12
TCF4-290ENST00000638154 HERC1Q15751 4861 aa1.83□□□□□ -2.12
TCF4-290ENST00000638154 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
TCF4-290ENST00000638154 DNAH1Q9P2D7 4330 aa1.82□□□□□ -2.12
TCF4-290ENST00000638154 LCE3EQ5T5B0 92 aa1.82□□□□□ -2.12
TCF4-290ENST00000638154 USH2AO75445 5202 aa1.79□□□□□ -2.12
TCF4-290ENST00000638154 HUWE1Q7Z6Z7 4374 aaKnown RBP1.76□□□□□ -2.13
TCF4-290ENST00000638154 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
TCF4-290ENST00000638154 ANK3Q12955 4377 aaKnown RBP1.76□□□□□ -2.13
TCF4-290ENST00000638154 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.74□□□□□ -2.13
TCF4-290ENST00000638154 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
TCF4-290ENST00000638154 KMT2DO14686 5537 aa1.73□□□□□ -2.13
TCF4-290ENST00000638154 KRTAP4-8Q9BYQ9 185 aa1.71□□□□□ -2.14
TCF4-290ENST00000638154 FLGP20930 4061 aaPredicted RBP1.71□□□□□ -2.14
TCF4-290ENST00000638154 DNAH10Q8IVF4 4471 aa1.71□□□□□ -2.14
TCF4-290ENST00000638154 MT1GP13640 62 aa1.7□□□□□ -2.14
TCF4-290ENST00000638154 LCE1AQ5T7P2 110 aa1.7□□□□□ -2.14
TCF4-290ENST00000638154 VPS13DQ5THJ4 4388 aa1.7□□□□□ -2.14
TCF4-290ENST00000638154 SPRR2GQ9BYE4 73 aa1.7□□□□□ -2.14
TCF4-290ENST00000638154 DYNC2H1Q8NCM8 4307 aaKnown RBP1.68□□□□□ -2.14
TCF4-290ENST00000638154 LCE1EQ5T753 118 aa1.68□□□□□ -2.14
TCF4-290ENST00000638154 KRTAP9-2Q9BYQ4 174 aa1.68□□□□□ -2.14
TCF4-290ENST00000638154 DNAH9Q9NYC9 4486 aa1.67□□□□□ -2.14
TCF4-290ENST00000638154 DNAH17Q9UFH2 4485 aa1.66□□□□□ -2.14
TCF4-290ENST00000638154 PLECQ15149 4684 aaKnown RBP1.66□□□□□ -2.14
TCF4-290ENST00000638154 LCE1FQ5T754 118 aa1.65□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP4-5Q9BYR2 181 aa1.64□□□□□ -2.15
TCF4-290ENST00000638154 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP9-6A0A140TA67 174 aa1.63□□□□□ -2.15
TCF4-290ENST00000638154 STARD9Q9P2P6 4700 aa1.63□□□□□ -2.15
TCF4-290ENST00000638154 MT1HL1P0DM35 61 aa1.63□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP9-9Q9BYP9 154 aa1.62□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP9-4Q9BYQ2 154 aa1.62□□□□□ -2.15
TCF4-290ENST00000638154 PKHD1L1Q86WI1 4243 aa1.62□□□□□ -2.15
TCF4-290ENST00000638154 LRP2P98164 4655 aa1.61□□□□□ -2.15
TCF4-290ENST00000638154 LCE1DQ5T752 114 aa1.61□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP4-8A0A0G2JLE6 195 aa1.61□□□□□ -2.15
TCF4-290ENST00000638154 FAT2Q9NYQ8 4349 aa1.61□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP2-3P0C7H8 128 aa1.6□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP2-4Q9BYR9 128 aa1.6□□□□□ -2.15
TCF4-290ENST00000638154 KRTAP2-1Q9BYU5 128 aa1.6□□□□□ -2.15
TCF4-290ENST00000638154 HSPG2P98160 4391 aa1.6□□□□□ -2.15
TCF4-290ENST00000638154 LCE4AQ5TA78 99 aa1.6□□□□□ -2.15
TCF4-290ENST00000638154 LCE5AQ5TCM9 118 aa1.58□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP4-7Q9BYR0 210 aa1.58□□□□□ -2.16
TCF4-290ENST00000638154 TNXBP22105 4242 aa1.57□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP9-7A8MTY7 169 aa1.57□□□□□ -2.16
TCF4-290ENST00000638154 KRTAP4-2Q9BYR5 136 aa1.57□□□□□ -2.16
TCF4-290ENST00000638154 MDN1Q9NU22 5596 aa1.57□□□□□ -2.16
TCF4-290ENST00000638154 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms