RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 ALMS1Q8TCU4 4167 aa7.35□□□□□ -1.23
CACNA1A-225ENST00000636389 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
CACNA1A-225ENST00000636389 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
CACNA1A-225ENST00000636389 HUWE1Q7Z6Z7 4374 aaKnown RBP7.19□□□□□ -1.26
CACNA1A-225ENST00000636389 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-225ENST00000636389 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
CACNA1A-225ENST00000636389 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
CACNA1A-225ENST00000636389 LYSTQ99698 3801 aa7.02□□□□□ -1.29
CACNA1A-225ENST00000636389 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
CACNA1A-225ENST00000636389 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
CACNA1A-225ENST00000636389 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
CACNA1A-225ENST00000636389 ANK2Q01484 3957 aa6.89□□□□□ -1.31
CACNA1A-225ENST00000636389 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
CACNA1A-225ENST00000636389 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
CACNA1A-225ENST00000636389 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
CACNA1A-225ENST00000636389 DNAH3Q8TD57 4116 aa6.81□□□□□ -1.32
CACNA1A-225ENST00000636389 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
CACNA1A-225ENST00000636389 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
CACNA1A-225ENST00000636389 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2EP22531 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2BP35325 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2AP35326 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 MT1HP80294 61 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
CACNA1A-225ENST00000636389 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
CACNA1A-225ENST00000636389 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
CACNA1A-225ENST00000636389 DNAH6Q9C0G6 4158 aa6.53□□□□□ -1.36
CACNA1A-225ENST00000636389 MT2AP02795 61 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 SPRR2DP22532 72 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
CACNA1A-225ENST00000636389 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
CACNA1A-225ENST00000636389 LCE2BO14633 110 aa6.41□□□□□ -1.38
CACNA1A-225ENST00000636389 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
CACNA1A-225ENST00000636389 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
CACNA1A-225ENST00000636389 MT1FP04733 61 aa6.38□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH9Q9NYC9 4486 aa6.35□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
CACNA1A-225ENST00000636389 MT1GP13640 62 aa6.31□□□□□ -1.4
CACNA1A-225ENST00000636389 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
CACNA1A-225ENST00000636389 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
CACNA1A-225ENST00000636389 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
CACNA1A-225ENST00000636389 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
CACNA1A-225ENST00000636389 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.43
CACNA1A-225ENST00000636389 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
CACNA1A-225ENST00000636389 VPS13DQ5THJ4 4388 aa6.08□□□□□ -1.44
CACNA1A-225ENST00000636389 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
CACNA1A-225ENST00000636389 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
CACNA1A-225ENST00000636389 LCE3EQ5T5B0 92 aa5.98□□□□□ -1.45
CACNA1A-225ENST00000636389 MT4P47944 62 aa5.91□□□□□ -1.46
CACNA1A-225ENST00000636389 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
CACNA1A-225ENST00000636389 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
CACNA1A-225ENST00000636389 MT1XP80297 61 aa5.82□□□□□ -1.48
CACNA1A-225ENST00000636389 PLECQ15149 4684 aaKnown RBP5.81□□□□□ -1.48
CACNA1A-225ENST00000636389 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
CACNA1A-225ENST00000636389 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
CACNA1A-225ENST00000636389 LCE1BQ5T7P3 118 aa5.76□□□□□ -1.49
CACNA1A-225ENST00000636389 PKD1P98161 4303 aa5.74□□□□□ -1.49
CACNA1A-225ENST00000636389 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
CACNA1A-225ENST00000636389 FAT1Q14517 4588 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 MT3P25713 68 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CACNA1A-225ENST00000636389 PRM1P04553 51 aa5.65□□□□□ -1.51
CACNA1A-225ENST00000636389 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CACNA1A-225ENST00000636389 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 DNHD1Q96M86 4753 aa5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
CACNA1A-225ENST00000636389 MT1BP07438 61 aa5.53□□□□□ -1.52
CACNA1A-225ENST00000636389 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
CACNA1A-225ENST00000636389 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
CACNA1A-225ENST00000636389 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CACNA1A-225ENST00000636389 RYR1P21817 5038 aa5.47□□□□□ -1.53
CACNA1A-225ENST00000636389 TNXBP22105 4242 aa5.46□□□□□ -1.54
CACNA1A-225ENST00000636389 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
CACNA1A-225ENST00000636389 RYR2Q92736 4967 aa5.44□□□□□ -1.54
CACNA1A-225ENST00000636389 MT1LQ93083 61 aa5.44□□□□□ -1.54
CACNA1A-225ENST00000636389 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
CACNA1A-225ENST00000636389 LPAP08519 4548 aa5.39□□□□□ -1.55
CACNA1A-225ENST00000636389 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
CACNA1A-225ENST00000636389 DYNC1H1Q14204 4646 aaKnown RBP5.38□□□□□ -1.55
CACNA1A-225ENST00000636389 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CACNA1A-225ENST00000636389 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
CACNA1A-225ENST00000636389 MT1EP04732 61 aa5.29□□□□□ -1.56
CACNA1A-225ENST00000636389 BIRC6Q9NR09 4857 aa5.28□□□□□ -1.56
CACNA1A-225ENST00000636389 HSPG2P98160 4391 aa5.25□□□□□ -1.57
CACNA1A-225ENST00000636389 MT1MQ8N339 61 aa5.22□□□□□ -1.57
CACNA1A-225ENST00000636389 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1CQ5T751 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1EQ5T753 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1FQ5T754 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
CACNA1A-225ENST00000636389 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms