RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 ALMS1Q8TCU4 4167 aa7.35□□□□□ -1.23
CACNA1A-225ENST00000636389 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
CACNA1A-225ENST00000636389 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
CACNA1A-225ENST00000636389 HUWE1Q7Z6Z7 4374 aaKnown RBP7.19□□□□□ -1.26
CACNA1A-225ENST00000636389 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
CACNA1A-225ENST00000636389 SPRR2FQ96RM1 72 aa7.07□□□□□ -1.28
CACNA1A-225ENST00000636389 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
CACNA1A-225ENST00000636389 LYSTQ99698 3801 aa7.02□□□□□ -1.29
CACNA1A-225ENST00000636389 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
CACNA1A-225ENST00000636389 DNAH2Q9P225 4427 aa6.95□□□□□ -1.3
CACNA1A-225ENST00000636389 CMYA5Q8N3K9 4069 aa6.92□□□□□ -1.3
CACNA1A-225ENST00000636389 ANK2Q01484 3957 aa6.89□□□□□ -1.31
CACNA1A-225ENST00000636389 DNAH1Q9P2D7 4330 aa6.86□□□□□ -1.31
CACNA1A-225ENST00000636389 DNAH7Q8WXX0 4024 aa6.85□□□□□ -1.31
CACNA1A-225ENST00000636389 KRTAP10-4P60372 401 aaPredicted RBP6.82□□□□□ -1.32
CACNA1A-225ENST00000636389 DNAH3Q8TD57 4116 aa6.81□□□□□ -1.32
CACNA1A-225ENST00000636389 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
CACNA1A-225ENST00000636389 VPS13BQ7Z7G8 4022 aa6.77□□□□□ -1.33
CACNA1A-225ENST00000636389 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2EP22531 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2BP35325 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 SPRR2AP35326 72 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 MT1HP80294 61 aa6.72□□□□□ -1.33
CACNA1A-225ENST00000636389 LCE3CQ5T5A8 94 aa6.69□□□□□ -1.34
CACNA1A-225ENST00000636389 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
CACNA1A-225ENST00000636389 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
CACNA1A-225ENST00000636389 DNAH6Q9C0G6 4158 aa6.53□□□□□ -1.36
CACNA1A-225ENST00000636389 MT2AP02795 61 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 SPRR2DP22532 72 aa6.5□□□□□ -1.37
CACNA1A-225ENST00000636389 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
CACNA1A-225ENST00000636389 HECTD4Q9Y4D8 3996 aa6.43□□□□□ -1.38
CACNA1A-225ENST00000636389 LCE2BO14633 110 aa6.41□□□□□ -1.38
CACNA1A-225ENST00000636389 KRTAP12-4P60329 112 aa6.39□□□□□ -1.39
CACNA1A-225ENST00000636389 FAT2Q9NYQ8 4349 aa6.39□□□□□ -1.39
CACNA1A-225ENST00000636389 MT1FP04733 61 aa6.38□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH9Q9NYC9 4486 aa6.35□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
CACNA1A-225ENST00000636389 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
CACNA1A-225ENST00000636389 MT1GP13640 62 aa6.31□□□□□ -1.4
CACNA1A-225ENST00000636389 PRKDCP78527 4128 aaKnown RBP6.23□□□□□ -1.41
CACNA1A-225ENST00000636389 DNAH17Q9UFH2 4485 aa6.15□□□□□ -1.42
CACNA1A-225ENST00000636389 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
CACNA1A-225ENST00000636389 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
CACNA1A-225ENST00000636389 LCE3DQ9BYE3 92 aa6.09□□□□□ -1.43
CACNA1A-225ENST00000636389 DNAH11Q96DT5 4516 aa6.08□□□□□ -1.44
CACNA1A-225ENST00000636389 VPS13DQ5THJ4 4388 aa6.08□□□□□ -1.44
CACNA1A-225ENST00000636389 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
CACNA1A-225ENST00000636389 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
CACNA1A-225ENST00000636389 LCE3EQ5T5B0 92 aa5.98□□□□□ -1.45
CACNA1A-225ENST00000636389 MT4P47944 62 aa5.91□□□□□ -1.46
CACNA1A-225ENST00000636389 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
CACNA1A-225ENST00000636389 DNAH5Q8TE73 4624 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP4-8A0A0G2JLE6 195 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 STARD9Q9P2P6 4700 aa5.85□□□□□ -1.47
CACNA1A-225ENST00000636389 KRTAP19-8Q3LI54 63 aa5.83□□□□□ -1.48
CACNA1A-225ENST00000636389 MT1XP80297 61 aa5.82□□□□□ -1.48
CACNA1A-225ENST00000636389 PLECQ15149 4684 aaKnown RBP5.81□□□□□ -1.48
CACNA1A-225ENST00000636389 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
CACNA1A-225ENST00000636389 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
CACNA1A-225ENST00000636389 LCE1BQ5T7P3 118 aa5.76□□□□□ -1.49
CACNA1A-225ENST00000636389 PKD1P98161 4303 aa5.74□□□□□ -1.49
CACNA1A-225ENST00000636389 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
CACNA1A-225ENST00000636389 FAT1Q14517 4588 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 MT3P25713 68 aa5.72□□□□□ -1.49
CACNA1A-225ENST00000636389 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CACNA1A-225ENST00000636389 PRM1P04553 51 aa5.65□□□□□ -1.51
CACNA1A-225ENST00000636389 LRP1Q07954 4544 aaKnown RBP5.62□□□□□ -1.51
CACNA1A-225ENST00000636389 KRTAP19-3Q7Z4W3 81 aa5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 DNHD1Q96M86 4753 aa5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 APOBP04114 4563 aaKnown RBP5.58□□□□□ -1.52
CACNA1A-225ENST00000636389 SACSQ9NZJ4 4579 aa5.54□□□□□ -1.52
CACNA1A-225ENST00000636389 MT1BP07438 61 aa5.53□□□□□ -1.52
CACNA1A-225ENST00000636389 KRTAP4-7Q9BYR0 210 aa5.52□□□□□ -1.53
CACNA1A-225ENST00000636389 KRTAP9-8Q9BYQ0 159 aa5.49□□□□□ -1.53
CACNA1A-225ENST00000636389 KIAA1109Q2LD37 5005 aa5.47□□□□□ -1.53
CACNA1A-225ENST00000636389 RYR1P21817 5038 aa5.47□□□□□ -1.53
CACNA1A-225ENST00000636389 TNXBP22105 4242 aa5.46□□□□□ -1.54
CACNA1A-225ENST00000636389 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
CACNA1A-225ENST00000636389 RYR2Q92736 4967 aa5.44□□□□□ -1.54
CACNA1A-225ENST00000636389 MT1LQ93083 61 aa5.44□□□□□ -1.54
CACNA1A-225ENST00000636389 HYDINQ4G0P3 5121 aa5.4□□□□□ -1.55
CACNA1A-225ENST00000636389 LPAP08519 4548 aa5.39□□□□□ -1.55
CACNA1A-225ENST00000636389 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
CACNA1A-225ENST00000636389 DYNC1H1Q14204 4646 aaKnown RBP5.38□□□□□ -1.55
CACNA1A-225ENST00000636389 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CACNA1A-225ENST00000636389 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
CACNA1A-225ENST00000636389 MT1EP04732 61 aa5.29□□□□□ -1.56
CACNA1A-225ENST00000636389 BIRC6Q9NR09 4857 aa5.28□□□□□ -1.56
CACNA1A-225ENST00000636389 HSPG2P98160 4391 aa5.25□□□□□ -1.57
CACNA1A-225ENST00000636389 MT1MQ8N339 61 aa5.22□□□□□ -1.57
CACNA1A-225ENST00000636389 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1CQ5T751 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1EQ5T753 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1FQ5T754 118 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 LCE1AQ5T7P2 110 aa5.21□□□□□ -1.57
CACNA1A-225ENST00000636389 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
CACNA1A-225ENST00000636389 KRTAP4-3Q9BYR4 195 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms