RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TPRXL	Q17RH7	258 aa		5.83	□□□□□ -1.48
CHD2-223	ENST00000636306	SMR3B	P02814	79 aa	Predicted RBP	5.83	□□□□□ -1.48
CHD2-223	ENST00000636306	COX6B2	Q6YFQ2	88 aa		5.8	□□□□□ -1.48
CHD2-223	ENST00000636306	SACS	Q9NZJ4	4579 aa		5.79	□□□□□ -1.48
CHD2-223	ENST00000636306	RPL37	P61927	97 aa	Known RBP	5.79	□□□□□ -1.48
CHD2-223	ENST00000636306	KRTAP10-4	P60372	401 aa	Predicted RBP	5.78	□□□□□ -1.48
CHD2-223	ENST00000636306	LRP1B	Q9NZR2	4599 aa		5.78	□□□□□ -1.48
CHD2-223	ENST00000636306	RYR1	P21817	5038 aa		5.77	□□□□□ -1.49
CHD2-223	ENST00000636306	RYR2	Q92736	4967 aa		5.77	□□□□□ -1.49
CHD2-223	ENST00000636306	PCLO	Q9Y6V0	5065 aa		5.76	□□□□□ -1.49
CHD2-223	ENST00000636306	LCE2C	Q5TA81	110 aa		5.73	□□□□□ -1.49
CHD2-223	ENST00000636306	HERC2	O95714	4834 aa		5.72	□□□□□ -1.49
CHD2-223	ENST00000636306	DYNC1H1	Q14204	4646 aa	Known RBP	5.72	□□□□□ -1.49
CHD2-223	ENST00000636306	VPS13B	Q7Z7G8	4022 aa		5.71	□□□□□ -1.5
CHD2-223	ENST00000636306	KRTAP3-1	Q9BYR8	98 aa		5.7	□□□□□ -1.5
CHD2-223	ENST00000636306	LUZP6	Q538Z0	58 aa		5.68	□□□□□ -1.5
CHD2-223	ENST00000636306		Q5VSD8	79 aa		5.68	□□□□□ -1.5
CHD2-223	ENST00000636306	FLG2	Q5D862	2391 aa	Predicted RBP	5.67	□□□□□ -1.5
CHD2-223	ENST00000636306	PKHD1	P08F94	4074 aa		5.67	□□□□□ -1.5
CHD2-223	ENST00000636306	APOB	P04114	4563 aa	Known RBP	5.65	□□□□□ -1.51
CHD2-223	ENST00000636306	C10orf95	Q9H7T3	257 aa		5.65	□□□□□ -1.51
CHD2-223	ENST00000636306	LOR	P23490	312 aa	Predicted RBP	5.64	□□□□□ -1.51
CHD2-223	ENST00000636306	C9orf92	A6NGG3	77 aa		5.62	□□□□□ -1.51
CHD2-223	ENST00000636306	PKHD1L1	Q86WI1	4243 aa		5.62	□□□□□ -1.51
CHD2-223	ENST00000636306	KRTAP10-8	P60410	259 aa		5.61	□□□□□ -1.51
CHD2-223	ENST00000636306	KRTAP10-6	P60371	365 aa	Predicted RBP	5.59	□□□□□ -1.51
CHD2-223	ENST00000636306	KRTAP13-4	Q3LI77	160 aa		5.55	□□□□□ -1.52
CHD2-223	ENST00000636306		S4R3F8	94 aa		5.55	□□□□□ -1.52
CHD2-223	ENST00000636306		A0A0D9SG42	100 aa		5.54	□□□□□ -1.52
CHD2-223	ENST00000636306	XP32	Q5T750	250 aa		5.54	□□□□□ -1.52
CHD2-223	ENST00000636306	FAT1	Q14517	4588 aa		5.5	□□□□□ -1.53
CHD2-223	ENST00000636306	SEC61B	P60468	96 aa	Known RBP	5.48	□□□□□ -1.53
CHD2-223	ENST00000636306	MT1HL1	P0DM35	61 aa		5.44	□□□□□ -1.54
CHD2-223	ENST00000636306	KRTAP12-2	P59991	146 aa		5.44	□□□□□ -1.54
CHD2-223	ENST00000636306	HSPG2	P98160	4391 aa		5.43	□□□□□ -1.54
CHD2-223	ENST00000636306	UBR4	Q5T4S7	5183 aa		5.41	□□□□□ -1.54
CHD2-223	ENST00000636306	KRTAP12-1	P59990	96 aa		5.41	□□□□□ -1.54
CHD2-223	ENST00000636306	KIAA1109	Q2LD37	5005 aa		5.39	□□□□□ -1.55
CHD2-223	ENST00000636306	PLAC4	Q8WY50	150 aa		5.39	□□□□□ -1.55
CHD2-223	ENST00000636306	ABCA13	Q86UQ4	5058 aa		5.38	□□□□□ -1.55
CHD2-223	ENST00000636306	TNXB	P22105	4242 aa		5.37	□□□□□ -1.55
CHD2-223	ENST00000636306	FAT3	Q8TDW7	4589 aa		5.35	□□□□□ -1.55
CHD2-223	ENST00000636306	LOC100996750	A0A140TA64	210 aa		5.34	□□□□□ -1.55
CHD2-223	ENST00000636306	KRTAP4-6	Q9BYQ5	205 aa		5.34	□□□□□ -1.55
CHD2-223	ENST00000636306	HERC1	Q15751	4861 aa		5.34	□□□□□ -1.56
CHD2-223	ENST00000636306		M0QZ58	72 aa		5.31	□□□□□ -1.56
CHD2-223	ENST00000636306	LRP1	Q07954	4544 aa	Known RBP	5.28	□□□□□ -1.56
CHD2-223	ENST00000636306	DMBT1	Q9UGM3	2413 aa	Predicted RBP	5.28	□□□□□ -1.56
CHD2-223	ENST00000636306	KRTAP4-5	Q9BYR2	181 aa		5.24	□□□□□ -1.57
CHD2-223	ENST00000636306	CAMK2N1	Q7Z7J9	78 aa		5.21	□□□□□ -1.57
CHD2-223	ENST00000636306	PP632	Q6XCG6	107 aa		5.18	□□□□□ -1.58
CHD2-223	ENST00000636306	MYCBP2	O75592	4640 aa		5.14	□□□□□ -1.59
CHD2-223	ENST00000636306	PRO2289	Q9P1D8	64 aa		5.06	□□□□□ -1.6
CHD2-223	ENST00000636306	KRTAP9-6	A0A140TA67	174 aa		5.02	□□□□□ -1.61
CHD2-223	ENST00000636306	SPRR5	A0A1B0GTR4	108 aa		5	□□□□□ -1.61
CHD2-223	ENST00000636306	KRTAP9-2	Q9BYQ4	174 aa		4.96	□□□□□ -1.62
CHD2-223	ENST00000636306	LRP2	P98164	4655 aa		4.95	□□□□□ -1.62
CHD2-223	ENST00000636306		R4GN34	69 aa		4.94	□□□□□ -1.62
CHD2-223	ENST00000636306	KRTAP23-1	A1A580	65 aa		4.92	□□□□□ -1.62
CHD2-223	ENST00000636306	INE1	O15225	51 aa		4.92	□□□□□ -1.62
CHD2-223	ENST00000636306	KRTAP4-8	Q9BYQ9	185 aa		4.92	□□□□□ -1.62
CHD2-223	ENST00000636306	HMCN2	Q8NDA2	5059 aa		4.91	□□□□□ -1.62
CHD2-223	ENST00000636306	KRTAP4-1	Q9BYQ7	146 aa		4.91	□□□□□ -1.62
CHD2-223	ENST00000636306	LPA	P08519	4548 aa		4.9	□□□□□ -1.63
CHD2-223	ENST00000636306	MUC17	Q685J3	4493 aa		4.89	□□□□□ -1.63
CHD2-223	ENST00000636306	KRTAP19-2	Q3LHN2	52 aa		4.83	□□□□□ -1.64
CHD2-223	ENST00000636306	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.8	□□□□□ -1.64
CHD2-223	ENST00000636306	RNF213	Q63HN8	5207 aa		4.79	□□□□□ -1.64
CHD2-223	ENST00000636306	TNP1	P09430	55 aa		4.73	□□□□□ -1.65
CHD2-223	ENST00000636306	KRTAP4-12	Q9BQ66	201 aa		4.73	□□□□□ -1.65
CHD2-223	ENST00000636306	MUC2	Q02817	5179 aa		4.68	□□□□□ -1.66
CHD2-223	ENST00000636306	FAT4	Q6V0I7	4981 aa		4.67	□□□□□ -1.66
CHD2-223	ENST00000636306	LCE3B	Q5TA77	95 aa		4.66	□□□□□ -1.66
CHD2-223	ENST00000636306	KRTAP19-1	Q8IUB9	90 aa		4.63	□□□□□ -1.67
CHD2-223	ENST00000636306	FLG	P20930	4061 aa	Predicted RBP	4.63	□□□□□ -1.67
CHD2-223	ENST00000636306		M0R2T5	61 aa		4.62	□□□□□ -1.67
CHD2-223	ENST00000636306	CRCT1	Q9UGL9	99 aa		4.59	□□□□□ -1.67
CHD2-223	ENST00000636306	KRTAP9-9	Q9BYP9	154 aa		4.58	□□□□□ -1.68
CHD2-223	ENST00000636306	KRTAP9-4	Q9BYQ2	154 aa		4.58	□□□□□ -1.68
CHD2-223	ENST00000636306	MT1H	P80294	61 aa		4.56	□□□□□ -1.68
CHD2-223	ENST00000636306	SPRR2G	Q9BYE4	73 aa		4.52	□□□□□ -1.69
CHD2-223	ENST00000636306	KRTAP4-8	A0A0G2JLE6	195 aa		4.5	□□□□□ -1.69
CHD2-223	ENST00000636306	KRTAP10-10	P60014	251 aa		4.46	□□□□□ -1.7
CHD2-223	ENST00000636306	KRTAP9-7	A8MTY7	169 aa		4.45	□□□□□ -1.7
CHD2-223	ENST00000636306	MT2A	P02795	61 aa		4.45	□□□□□ -1.7
CHD2-223	ENST00000636306	FSIP2	Q5CZC0	6907 aa		4.44	□□□□□ -1.7
CHD2-223	ENST00000636306	MT1F	P04733	61 aa		4.4	□□□□□ -1.7
CHD2-223	ENST00000636306	KRTAP9-8	Q9BYQ0	159 aa		4.4	□□□□□ -1.7
CHD2-223	ENST00000636306	LCE1D	Q5T752	114 aa		4.39	□□□□□ -1.71
CHD2-223	ENST00000636306	KRTAP19-8	Q3LI54	63 aa		4.36	□□□□□ -1.71
CHD2-223	ENST00000636306	KRTAP4-7	Q9BYR0	210 aa		4.35	□□□□□ -1.71
CHD2-223	ENST00000636306	LCE3A	Q5TA76	89 aa		4.32	□□□□□ -1.72
CHD2-223	ENST00000636306	KRTAP8-1	Q8IUC2	63 aa		4.31	□□□□□ -1.72
CHD2-223	ENST00000636306	KRTAP19-4	Q3LI73	84 aa		4.3	□□□□□ -1.72
CHD2-223	ENST00000636306	KRTAP4-9	Q9BYQ8	210 aa		4.27	□□□□□ -1.73
CHD2-223	ENST00000636306	KRTAP9-3	Q9BYQ3	159 aa		4.24	□□□□□ -1.73
CHD2-223	ENST00000636306	MT1B	P07438	61 aa		4.23	□□□□□ -1.73
CHD2-223	ENST00000636306	LCE4A	Q5TA78	99 aa		4.22	□□□□□ -1.73
CHD2-223	ENST00000636306	KRTAP10-12	P60413	245 aa		4.19	□□□□□ -1.74
CHD2-223	ENST00000636306	KRTAP4-2	Q9BYR5	136 aa		4.16	□□□□□ -1.74

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