RNA–Protein interactions for RNA: ENST00000634308.1

ATP7B-211, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 4,321 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-211ENST00000634308 TNP1P09430 55 aa4.71□□□□□ -1.66
ATP7B-211ENST00000634308 KRTAP3-3Q9BYR6 98 aa4.69□□□□□ -1.66
ATP7B-211ENST00000634308 KRTAP3-2Q9BYR7 98 aa4.68□□□□□ -1.66
ATP7B-211ENST00000634308 BIRC6Q9NR09 4857 aa4.65□□□□□ -1.66
ATP7B-211ENST00000634308 ANK2Q01484 3957 aa4.64□□□□□ -1.67
ATP7B-211ENST00000634308 DNAH8Q96JB1 4490 aa4.63□□□□□ -1.67
ATP7B-211ENST00000634308 KRTAP10-4P60372 401 aaPredicted RBP4.63□□□□□ -1.67
ATP7B-211ENST00000634308 STARD9Q9P2P6 4700 aa4.63□□□□□ -1.67
ATP7B-211ENST00000634308 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
ATP7B-211ENST00000634308 VPS13DQ5THJ4 4388 aa4.61□□□□□ -1.67
ATP7B-211ENST00000634308 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
ATP7B-211ENST00000634308 DNAH17Q9UFH2 4485 aa4.61□□□□□ -1.67
ATP7B-211ENST00000634308 LRP1BQ9NZR2 4599 aa4.58□□□□□ -1.68
ATP7B-211ENST00000634308 RYR1P21817 5038 aa4.57□□□□□ -1.68
ATP7B-211ENST00000634308 PRKDCP78527 4128 aaKnown RBP4.56□□□□□ -1.68
ATP7B-211ENST00000634308 LYSTQ99698 3801 aa4.55□□□□□ -1.68
ATP7B-211ENST00000634308 RYR3Q15413 4870 aa4.54□□□□□ -1.68
ATP7B-211ENST00000634308 FAT1Q14517 4588 aa4.54□□□□□ -1.68
ATP7B-211ENST00000634308 DNAH2Q9P225 4427 aa4.53□□□□□ -1.68
ATP7B-211ENST00000634308 KMT2AQ03164 3969 aa4.53□□□□□ -1.68
ATP7B-211ENST00000634308 HYDINQ4G0P3 5121 aa4.52□□□□□ -1.69
ATP7B-211ENST00000634308 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
ATP7B-211ENST00000634308 DNAH3Q8TD57 4116 aa4.48□□□□□ -1.69
ATP7B-211ENST00000634308 HERC2O95714 4834 aa4.46□□□□□ -1.7
ATP7B-211ENST00000634308 DYNC1H1Q14204 4646 aaKnown RBP4.44□□□□□ -1.7
ATP7B-211ENST00000634308 PRO2289Q9P1D8 64 aa4.44□□□□□ -1.7
ATP7B-211ENST00000634308 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
ATP7B-211ENST00000634308 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
ATP7B-211ENST00000634308 VPS13BQ7Z7G8 4022 aa4.4□□□□□ -1.7
ATP7B-211ENST00000634308 MYCBP2O75592 4640 aa4.4□□□□□ -1.7
ATP7B-211ENST00000634308 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
ATP7B-211ENST00000634308 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
ATP7B-211ENST00000634308 HECTD4Q9Y4D8 3996 aa4.36□□□□□ -1.71
ATP7B-211ENST00000634308 DYNC2H1Q8NCM8 4307 aaKnown RBP4.35□□□□□ -1.71
ATP7B-211ENST00000634308 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
ATP7B-211ENST00000634308 RYR2Q92736 4967 aa4.33□□□□□ -1.72
ATP7B-211ENST00000634308 KMT2CQ8NEZ4 4911 aaKnown RBP4.3□□□□□ -1.72
ATP7B-211ENST00000634308 INE1O15225 51 aa4.28□□□□□ -1.72
ATP7B-211ENST00000634308 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
ATP7B-211ENST00000634308 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
ATP7B-211ENST00000634308 FAT2Q9NYQ8 4349 aa4.25□□□□□ -1.73
ATP7B-211ENST00000634308 PCLOQ9Y6V0 5065 aa4.24□□□□□ -1.73
ATP7B-211ENST00000634308 FAT3Q8TDW7 4589 aa4.22□□□□□ -1.73
ATP7B-211ENST00000634308 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
ATP7B-211ENST00000634308 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
ATP7B-211ENST00000634308 PKHD1P08F94 4074 aa4.16□□□□□ -1.74
ATP7B-211ENST00000634308 KRTAP9-2Q9BYQ4 174 aa4.14□□□□□ -1.75
ATP7B-211ENST00000634308 MT1HP80294 61 aa4.13□□□□□ -1.75
ATP7B-211ENST00000634308 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
ATP7B-211ENST00000634308 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
ATP7B-211ENST00000634308 ABCA13Q86UQ4 5058 aa4.1□□□□□ -1.75
ATP7B-211ENST00000634308 LRP2P98164 4655 aa4.1□□□□□ -1.75
ATP7B-211ENST00000634308 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
ATP7B-211ENST00000634308 LCE3AQ5TA76 89 aa4.07□□□□□ -1.76
ATP7B-211ENST00000634308 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
ATP7B-211ENST00000634308 HERC1Q15751 4861 aa4.04□□□□□ -1.76
ATP7B-211ENST00000634308 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
ATP7B-211ENST00000634308 PKD1P98161 4303 aa4.01□□□□□ -1.77
ATP7B-211ENST00000634308 KRTAP12-3P60328 96 aa3.99□□□□□ -1.77
ATP7B-211ENST00000634308 HSPG2P98160 4391 aa3.97□□□□□ -1.77
ATP7B-211ENST00000634308 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
ATP7B-211ENST00000634308 MT2AP02795 61 aa3.94□□□□□ -1.78
ATP7B-211ENST00000634308 FSIP2Q5CZC0 6907 aa3.92□□□□□ -1.78
ATP7B-211ENST00000634308 KRTAP8-1Q8IUC2 63 aa3.9□□□□□ -1.78
ATP7B-211ENST00000634308 LPAP08519 4548 aa3.88□□□□□ -1.79
ATP7B-211ENST00000634308 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
ATP7B-211ENST00000634308 MT1FP04733 61 aa3.85□□□□□ -1.79
ATP7B-211ENST00000634308 PKHD1L1Q86WI1 4243 aa3.83□□□□□ -1.8
ATP7B-211ENST00000634308 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
ATP7B-211ENST00000634308 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
ATP7B-211ENST00000634308 LCE2DQ5TA82 110 aaPredicted RBP3.8□□□□□ -1.8
ATP7B-211ENST00000634308 TNXBP22105 4242 aa3.8□□□□□ -1.8
ATP7B-211ENST00000634308 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
ATP7B-211ENST00000634308 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
ATP7B-211ENST00000634308 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
ATP7B-211ENST00000634308 LCE2CQ5TA81 110 aa3.71□□□□□ -1.82
ATP7B-211ENST00000634308 SPRR2EP22531 72 aa3.69□□□□□ -1.82
ATP7B-211ENST00000634308 SPRR2BP35325 72 aa3.69□□□□□ -1.82
ATP7B-211ENST00000634308 SPRR2AP35326 72 aa3.69□□□□□ -1.82
ATP7B-211ENST00000634308 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
ATP7B-211ENST00000634308 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
ATP7B-211ENST00000634308 KRTAP9-8Q9BYQ0 159 aa3.66□□□□□ -1.82
ATP7B-211ENST00000634308 MUC17Q685J3 4493 aa3.65□□□□□ -1.82
ATP7B-211ENST00000634308 KRTAP19-5Q3LI72 72 aa3.64□□□□□ -1.83
ATP7B-211ENST00000634308 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
ATP7B-211ENST00000634308 FAT4Q6V0I7 4981 aa3.64□□□□□ -1.83
ATP7B-211ENST00000634308 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
ATP7B-211ENST00000634308 MT1XP80297 61 aa3.61□□□□□ -1.83
ATP7B-211ENST00000634308 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
ATP7B-211ENST00000634308 MT1BP07438 61 aa3.59□□□□□ -1.83
ATP7B-211ENST00000634308 LCE3CQ5T5A8 94 aa3.58□□□□□ -1.84
ATP7B-211ENST00000634308 SPRR2DP22532 72 aa3.58□□□□□ -1.84
ATP7B-211ENST00000634308 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
ATP7B-211ENST00000634308 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
ATP7B-211ENST00000634308 FLGP20930 4061 aaPredicted RBP3.57□□□□□ -1.84
ATP7B-211ENST00000634308 MUC2Q02817 5179 aa3.56□□□□□ -1.84
ATP7B-211ENST00000634308 LCE2BO14633 110 aa3.54□□□□□ -1.84
ATP7B-211ENST00000634308 KRTAP20-1Q3LI63 56 aa3.51□□□□□ -1.85
ATP7B-211ENST00000634308 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
ATP7B-211ENST00000634308 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms