RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
UBE3A-220ENST00000630424 CSMD3Q7Z407 3707 aa6.28□□□□□ -1.4
UBE3A-220ENST00000630424 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
UBE3A-220ENST00000630424 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
UBE3A-220ENST00000630424 KRTAP3-3Q9BYR6 98 aa6.23□□□□□ -1.41
UBE3A-220ENST00000630424 DNAH10Q8IVF4 4471 aa6.22□□□□□ -1.41
UBE3A-220ENST00000630424 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
UBE3A-220ENST00000630424 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
UBE3A-220ENST00000630424 KRTAP12-3P60328 96 aa6.14□□□□□ -1.43
UBE3A-220ENST00000630424 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
UBE3A-220ENST00000630424 HECTD4Q9Y4D8 3996 aa6.03□□□□□ -1.44
UBE3A-220ENST00000630424 PLECQ15149 4684 aaKnown RBP6.03□□□□□ -1.44
UBE3A-220ENST00000630424 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
UBE3A-220ENST00000630424 LCE3AQ5TA76 89 aa6□□□□□ -1.45
UBE3A-220ENST00000630424 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
UBE3A-220ENST00000630424 VPS13DQ5THJ4 4388 aa5.99□□□□□ -1.45
UBE3A-220ENST00000630424 DNAH2Q9P225 4427 aa5.98□□□□□ -1.45
UBE3A-220ENST00000630424 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.46
UBE3A-220ENST00000630424 DNAH8Q96JB1 4490 aa5.94□□□□□ -1.46
UBE3A-220ENST00000630424 FRAS1Q86XX4 4008 aa5.92□□□□□ -1.46
UBE3A-220ENST00000630424 DNAH17Q9UFH2 4485 aa5.9□□□□□ -1.46
UBE3A-220ENST00000630424 DNAH6Q9C0G6 4158 aa5.9□□□□□ -1.47
UBE3A-220ENST00000630424 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.47
UBE3A-220ENST00000630424 KMT2AQ03164 3969 aa5.89□□□□□ -1.47
UBE3A-220ENST00000630424 INE1O15225 51 aa5.89□□□□□ -1.47
UBE3A-220ENST00000630424 DNAH5Q8TE73 4624 aa5.86□□□□□ -1.47
UBE3A-220ENST00000630424 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
UBE3A-220ENST00000630424 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
UBE3A-220ENST00000630424 DNAH11Q96DT5 4516 aa5.82□□□□□ -1.48
UBE3A-220ENST00000630424 PKD1P98161 4303 aa5.8□□□□□ -1.48
UBE3A-220ENST00000630424 KRTAP4-1Q9BYQ7 146 aa5.8□□□□□ -1.48
UBE3A-220ENST00000630424 MT1HP80294 61 aa5.78□□□□□ -1.48
UBE3A-220ENST00000630424 FAT1Q14517 4588 aa5.75□□□□□ -1.49
UBE3A-220ENST00000630424 FAT2Q9NYQ8 4349 aa5.75□□□□□ -1.49
UBE3A-220ENST00000630424 MT2AP02795 61 aa5.72□□□□□ -1.49
UBE3A-220ENST00000630424 SACSQ9NZJ4 4579 aa5.71□□□□□ -1.5
UBE3A-220ENST00000630424 RYR1P21817 5038 aa5.69□□□□□ -1.5
UBE3A-220ENST00000630424 HYDINQ4G0P3 5121 aa5.67□□□□□ -1.5
UBE3A-220ENST00000630424 RYR2Q92736 4967 aa5.66□□□□□ -1.5
UBE3A-220ENST00000630424 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.51
UBE3A-220ENST00000630424 KMT2CQ8NEZ4 4911 aaKnown RBP5.64□□□□□ -1.51
UBE3A-220ENST00000630424 LRP1BQ9NZR2 4599 aa5.58□□□□□ -1.52
UBE3A-220ENST00000630424 MT1FP04733 61 aa5.58□□□□□ -1.52
UBE3A-220ENST00000630424 RYR3Q15413 4870 aa5.57□□□□□ -1.52
UBE3A-220ENST00000630424 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
UBE3A-220ENST00000630424 VPS13BQ7Z7G8 4022 aa5.56□□□□□ -1.52
UBE3A-220ENST00000630424 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
UBE3A-220ENST00000630424 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
UBE3A-220ENST00000630424 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
UBE3A-220ENST00000630424 PKHD1P08F94 4074 aa5.49□□□□□ -1.53
UBE3A-220ENST00000630424 KRTAP19-5Q3LI72 72 aa5.43□□□□□ -1.54
UBE3A-220ENST00000630424 APOBP04114 4563 aaKnown RBP5.42□□□□□ -1.54
UBE3A-220ENST00000630424 KIAA1109Q2LD37 5005 aa5.38□□□□□ -1.55
UBE3A-220ENST00000630424 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
UBE3A-220ENST00000630424 BIRC6Q9NR09 4857 aa5.33□□□□□ -1.56
UBE3A-220ENST00000630424 SPRR2EP22531 72 aa5.28□□□□□ -1.56
UBE3A-220ENST00000630424 SPRR2BP35325 72 aa5.28□□□□□ -1.56
UBE3A-220ENST00000630424 SPRR2AP35326 72 aa5.28□□□□□ -1.56
UBE3A-220ENST00000630424 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
UBE3A-220ENST00000630424 HSPG2P98160 4391 aa5.26□□□□□ -1.57
UBE3A-220ENST00000630424 TNXBP22105 4242 aa5.26□□□□□ -1.57
UBE3A-220ENST00000630424 FAT3Q8TDW7 4589 aa5.22□□□□□ -1.57
UBE3A-220ENST00000630424 HERC2O95714 4834 aa5.21□□□□□ -1.57
UBE3A-220ENST00000630424 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
UBE3A-220ENST00000630424 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
UBE3A-220ENST00000630424 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
UBE3A-220ENST00000630424 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.58
UBE3A-220ENST00000630424 KRTAP19-4Q3LI73 84 aa5.13□□□□□ -1.59
UBE3A-220ENST00000630424 SPRR2DP22532 72 aa5.1□□□□□ -1.59
UBE3A-220ENST00000630424 PCLOQ9Y6V0 5065 aa5.09□□□□□ -1.59
UBE3A-220ENST00000630424 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
UBE3A-220ENST00000630424 LCE2BO14633 110 aa5.05□□□□□ -1.6
UBE3A-220ENST00000630424 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
UBE3A-220ENST00000630424 ABCA13Q86UQ4 5058 aa5.04□□□□□ -1.6
UBE3A-220ENST00000630424 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
UBE3A-220ENST00000630424 MT1XP80297 61 aa5.03□□□□□ -1.6
UBE3A-220ENST00000630424 KRTAP12-4P60329 112 aa5.01□□□□□ -1.61
UBE3A-220ENST00000630424 MT1BP07438 61 aa5□□□□□ -1.61
UBE3A-220ENST00000630424 MT1GP13640 62 aa5□□□□□ -1.61
UBE3A-220ENST00000630424 KRTAP9-8Q9BYQ0 159 aa5□□□□□ -1.61
UBE3A-220ENST00000630424 KRTAP4-8A0A0G2JLE6 195 aa4.97□□□□□ -1.61
UBE3A-220ENST00000630424 KRTAP4-8Q9BYQ9 185 aa4.97□□□□□ -1.61
UBE3A-220ENST00000630424 LPAP08519 4548 aa4.93□□□□□ -1.62
UBE3A-220ENST00000630424 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
UBE3A-220ENST00000630424 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
UBE3A-220ENST00000630424 LRP2P98164 4655 aa4.85□□□□□ -1.63
UBE3A-220ENST00000630424 HERC1Q15751 4861 aa4.8□□□□□ -1.64
UBE3A-220ENST00000630424 MUC17Q685J3 4493 aa4.75□□□□□ -1.65
UBE3A-220ENST00000630424 FSIP2Q5CZC0 6907 aa4.74□□□□□ -1.65
UBE3A-220ENST00000630424 HMCN2Q8NDA2 5059 aa4.72□□□□□ -1.65
UBE3A-220ENST00000630424 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
UBE3A-220ENST00000630424 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
UBE3A-220ENST00000630424 LCE3DQ9BYE3 92 aa4.71□□□□□ -1.66
UBE3A-220ENST00000630424 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
UBE3A-220ENST00000630424 KRTAP9-2Q9BYQ4 174 aa4.64□□□□□ -1.67
UBE3A-220ENST00000630424 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
UBE3A-220ENST00000630424 LCE3EQ5T5B0 92 aa4.61□□□□□ -1.67
UBE3A-220ENST00000630424 MT1LQ93083 61 aa4.59□□□□□ -1.67
UBE3A-220ENST00000630424 MT4P47944 62 aa4.57□□□□□ -1.68
UBE3A-220ENST00000630424 MT1EP04732 61 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms