RNA–Protein interactions for RNA: ENST00000627656.2

FOXM1-210, Transcript of forkhead box M1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FOXM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXM1-210ENST00000627656 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
FOXM1-210ENST00000627656 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
FOXM1-210ENST00000627656 COX6B2Q6YFQ2 88 aa7.31□□□□□ -1.24
FOXM1-210ENST00000627656 KIAA1109Q2LD37 5005 aa7.31□□□□□ -1.24
FOXM1-210ENST00000627656 C20orf166-AS1Q96NR2 134 aa7.3□□□□□ -1.24
FOXM1-210ENST00000627656 KRTAP10-4P60372 401 aaPredicted RBP7.29□□□□□ -1.24
FOXM1-210ENST00000627656 RYR2Q92736 4967 aa7.25□□□□□ -1.25
FOXM1-210ENST00000627656 P0C880 135 aa7.24□□□□□ -1.25
FOXM1-210ENST00000627656 RPS29P62273 56 aaKnown RBP7.24□□□□□ -1.25
FOXM1-210ENST00000627656 HSPG2P98160 4391 aa7.23□□□□□ -1.25
FOXM1-210ENST00000627656 NDUFAF8A1L188 74 aa7.22□□□□□ -1.25
FOXM1-210ENST00000627656 RYR3Q15413 4870 aa7.2□□□□□ -1.26
FOXM1-210ENST00000627656 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
FOXM1-210ENST00000627656 PKHD1L1Q86WI1 4243 aa7.18□□□□□ -1.26
FOXM1-210ENST00000627656 KRTAP10-8P60410 259 aa7.17□□□□□ -1.26
FOXM1-210ENST00000627656 RYR1P21817 5038 aa7.15□□□□□ -1.26
FOXM1-210ENST00000627656 KRTAP17-1Q9BYP8 105 aa7.14□□□□□ -1.27
FOXM1-210ENST00000627656 XP32Q5T750 250 aa7.12□□□□□ -1.27
FOXM1-210ENST00000627656 TPRXLQ17RH7 258 aa7.12□□□□□ -1.27
FOXM1-210ENST00000627656 KRTAP21-3Q3LHN1 58 aa7.12□□□□□ -1.27
FOXM1-210ENST00000627656 LRP2P98164 4655 aa7.11□□□□□ -1.27
FOXM1-210ENST00000627656 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
FOXM1-210ENST00000627656 LPAP08519 4548 aa7.09□□□□□ -1.27
FOXM1-210ENST00000627656 S4R3F8 94 aa7.07□□□□□ -1.28
FOXM1-210ENST00000627656 EPPK1P58107 5090 aaKnown RBP6.99□□□□□ -1.29
FOXM1-210ENST00000627656 TNXBP22105 4242 aa6.98□□□□□ -1.29
FOXM1-210ENST00000627656 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
FOXM1-210ENST00000627656 KRTAP10-6P60371 365 aaPredicted RBP6.96□□□□□ -1.3
FOXM1-210ENST00000627656 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
FOXM1-210ENST00000627656 KRTAP12-2P59991 146 aa6.94□□□□□ -1.3
FOXM1-210ENST00000627656 KRTAP4-5Q9BYR2 181 aa6.94□□□□□ -1.3
FOXM1-210ENST00000627656 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
FOXM1-210ENST00000627656 LUZP6Q538Z0 58 aa6.89□□□□□ -1.31
FOXM1-210ENST00000627656 KRTAP3-2Q9BYR7 98 aa6.85□□□□□ -1.31
FOXM1-210ENST00000627656 MUC2Q02817 5179 aa6.83□□□□□ -1.32
FOXM1-210ENST00000627656 SEC61BP60468 96 aaKnown RBP6.82□□□□□ -1.32
FOXM1-210ENST00000627656 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
FOXM1-210ENST00000627656 M0QZ58 72 aa6.76□□□□□ -1.33
FOXM1-210ENST00000627656 KRTAP12-1P59990 96 aa6.75□□□□□ -1.33
FOXM1-210ENST00000627656 R4GN34 69 aa6.71□□□□□ -1.33
FOXM1-210ENST00000627656 HERC2O95714 4834 aa6.65□□□□□ -1.34
FOXM1-210ENST00000627656 LORP23490 312 aaPredicted RBP6.59□□□□□ -1.35
FOXM1-210ENST00000627656 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
FOXM1-210ENST00000627656 KRTAP4-1Q9BYQ7 146 aa6.57□□□□□ -1.36
FOXM1-210ENST00000627656 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
FOXM1-210ENST00000627656 HERC1Q15751 4861 aa6.51□□□□□ -1.37
FOXM1-210ENST00000627656 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
FOXM1-210ENST00000627656 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
FOXM1-210ENST00000627656 MUC17Q685J3 4493 aa6.34□□□□□ -1.39
FOXM1-210ENST00000627656 M0R2T5 61 aa6.33□□□□□ -1.4
FOXM1-210ENST00000627656 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
FOXM1-210ENST00000627656 LCE2DQ5TA82 110 aaPredicted RBP6.26□□□□□ -1.41
FOXM1-210ENST00000627656 UBR4Q5T4S7 5183 aa6.22□□□□□ -1.41
FOXM1-210ENST00000627656 BIRC6Q9NR09 4857 aa6.13□□□□□ -1.43
FOXM1-210ENST00000627656 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
FOXM1-210ENST00000627656 HMCN2Q8NDA2 5059 aa6.09□□□□□ -1.43
FOXM1-210ENST00000627656 FLGP20930 4061 aaPredicted RBP6.08□□□□□ -1.44
FOXM1-210ENST00000627656 TNP1P09430 55 aa6.07□□□□□ -1.44
FOXM1-210ENST00000627656 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
FOXM1-210ENST00000627656 KRTAP10-10P60014 251 aa6□□□□□ -1.45
FOXM1-210ENST00000627656 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
FOXM1-210ENST00000627656 MT1HP80294 61 aa5.82□□□□□ -1.48
FOXM1-210ENST00000627656 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
FOXM1-210ENST00000627656 MT1FP04733 61 aa5.79□□□□□ -1.48
FOXM1-210ENST00000627656 USH2AO75445 5202 aa5.78□□□□□ -1.48
FOXM1-210ENST00000627656 MT2AP02795 61 aa5.74□□□□□ -1.49
FOXM1-210ENST00000627656 LCE3AQ5TA76 89 aa5.72□□□□□ -1.49
FOXM1-210ENST00000627656 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
FOXM1-210ENST00000627656 FSIP2Q5CZC0 6907 aa5.66□□□□□ -1.5
FOXM1-210ENST00000627656 KMT2DO14686 5537 aa5.63□□□□□ -1.51
FOXM1-210ENST00000627656 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
FOXM1-210ENST00000627656 KRTAP9-8Q9BYQ0 159 aa5.62□□□□□ -1.51
FOXM1-210ENST00000627656 SPRR5A0A1B0GTR4 108 aa5.53□□□□□ -1.52
FOXM1-210ENST00000627656 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
FOXM1-210ENST00000627656 MT1BP07438 61 aa5.49□□□□□ -1.53
FOXM1-210ENST00000627656 KRTAP10-7P60409 375 aaPredicted RBP5.46□□□□□ -1.54
FOXM1-210ENST00000627656 KRTAP10-12P60413 245 aa5.46□□□□□ -1.54
FOXM1-210ENST00000627656 MT1XP80297 61 aa5.46□□□□□ -1.54
FOXM1-210ENST00000627656 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
FOXM1-210ENST00000627656 KRTAP12-3P60328 96 aa5.41□□□□□ -1.54
FOXM1-210ENST00000627656 KRTAP19-8Q3LI54 63 aa5.37□□□□□ -1.55
FOXM1-210ENST00000627656 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
FOXM1-210ENST00000627656 LCE2BO14633 110 aa5.34□□□□□ -1.55
FOXM1-210ENST00000627656 INE1O15225 51 aa5.32□□□□□ -1.56
FOXM1-210ENST00000627656 KRTAP8-1Q8IUC2 63 aa5.29□□□□□ -1.56
FOXM1-210ENST00000627656 KRTAP4-8A0A0G2JLE6 195 aa5.29□□□□□ -1.56
FOXM1-210ENST00000627656 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
FOXM1-210ENST00000627656 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
FOXM1-210ENST00000627656 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
FOXM1-210ENST00000627656 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
FOXM1-210ENST00000627656 LCE2AQ5TA79 106 aaPredicted RBP5□□□□□ -1.61
FOXM1-210ENST00000627656 SSPOA2VEC9 5147 aa5□□□□□ -1.61
FOXM1-210ENST00000627656 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
FOXM1-210ENST00000627656 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
FOXM1-210ENST00000627656 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
FOXM1-210ENST00000627656 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
FOXM1-210ENST00000627656 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
FOXM1-210ENST00000627656 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
FOXM1-210ENST00000627656 SYNE1Q8NF91 8797 aaKnown RBP4.88□□□□□ -1.63
FOXM1-210ENST00000627656 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms