RNA–Protein interactions for RNA: ENST00000627585.2

TNPO3-205, Transcript of transportin 3, humanhuman

TSL 2 BASIC

Gene TNPO3, Length 4,514 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-205ENST00000627585 ROMO1P60602 79 aa4.65□□□□□ -1.66
TNPO3-205ENST00000627585 R4GN34 69 aa4.65□□□□□ -1.66
TNPO3-205ENST00000627585 DNAH6Q9C0G6 4158 aa4.65□□□□□ -1.67
TNPO3-205ENST00000627585 HYDINQ4G0P3 5121 aa4.64□□□□□ -1.67
TNPO3-205ENST00000627585 KIAA1109Q2LD37 5005 aa4.63□□□□□ -1.67
TNPO3-205ENST00000627585 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
TNPO3-205ENST00000627585 RYR3Q15413 4870 aa4.62□□□□□ -1.67
TNPO3-205ENST00000627585 KMT2CQ8NEZ4 4911 aaKnown RBP4.58□□□□□ -1.68
TNPO3-205ENST00000627585 M0QZ58 72 aa4.58□□□□□ -1.68
TNPO3-205ENST00000627585 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
TNPO3-205ENST00000627585 RYR1P21817 5038 aa4.56□□□□□ -1.68
TNPO3-205ENST00000627585 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
TNPO3-205ENST00000627585 H0YAA0 97 aa4.54□□□□□ -1.68
TNPO3-205ENST00000627585 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
TNPO3-205ENST00000627585 APOBP04114 4563 aaKnown RBP4.52□□□□□ -1.69
TNPO3-205ENST00000627585 DNAH8Q96JB1 4490 aa4.51□□□□□ -1.69
TNPO3-205ENST00000627585 VPS13BQ7Z7G8 4022 aa4.5□□□□□ -1.69
TNPO3-205ENST00000627585 KRTAP17-1Q9BYP8 105 aa4.5□□□□□ -1.69
TNPO3-205ENST00000627585 PKHD1P08F94 4074 aa4.49□□□□□ -1.69
TNPO3-205ENST00000627585 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
TNPO3-205ENST00000627585 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.7
TNPO3-205ENST00000627585 PLAC4Q8WY50 150 aa4.45□□□□□ -1.7
TNPO3-205ENST00000627585 PKD1P98161 4303 aa4.44□□□□□ -1.7
TNPO3-205ENST00000627585 KRTAP3-1Q9BYR8 98 aa4.42□□□□□ -1.7
TNPO3-205ENST00000627585 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
TNPO3-205ENST00000627585 HSPG2P98160 4391 aa4.4□□□□□ -1.71
TNPO3-205ENST00000627585 HERC2O95714 4834 aa4.39□□□□□ -1.71
TNPO3-205ENST00000627585 LRP1Q07954 4544 aaKnown RBP4.39□□□□□ -1.71
TNPO3-205ENST00000627585 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
TNPO3-205ENST00000627585 EPPK1P58107 5090 aaKnown RBP4.37□□□□□ -1.71
TNPO3-205ENST00000627585 P0C880 135 aa4.34□□□□□ -1.71
TNPO3-205ENST00000627585 MYCBP2O75592 4640 aa4.31□□□□□ -1.72
TNPO3-205ENST00000627585 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
TNPO3-205ENST00000627585 FAT3Q8TDW7 4589 aa4.26□□□□□ -1.73
TNPO3-205ENST00000627585 KRTAP4-1Q9BYQ7 146 aa4.25□□□□□ -1.73
TNPO3-205ENST00000627585 ABCA13Q86UQ4 5058 aa4.21□□□□□ -1.73
TNPO3-205ENST00000627585 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
TNPO3-205ENST00000627585 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
TNPO3-205ENST00000627585 KRTAP13-4Q3LI77 160 aa4.2□□□□□ -1.74
TNPO3-205ENST00000627585 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
TNPO3-205ENST00000627585 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
TNPO3-205ENST00000627585 TNP1P09430 55 aa4.17□□□□□ -1.74
TNPO3-205ENST00000627585 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
TNPO3-205ENST00000627585 PRO2289Q9P1D8 64 aa4.13□□□□□ -1.75
TNPO3-205ENST00000627585 LRP2P98164 4655 aa4.12□□□□□ -1.75
TNPO3-205ENST00000627585 TNXBP22105 4242 aa4.09□□□□□ -1.75
TNPO3-205ENST00000627585 PCLOQ9Y6V0 5065 aa4.09□□□□□ -1.75
TNPO3-205ENST00000627585 MT1HP80294 61 aa4.09□□□□□ -1.76
TNPO3-205ENST00000627585 HERC1Q15751 4861 aa4.08□□□□□ -1.76
TNPO3-205ENST00000627585 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
TNPO3-205ENST00000627585 LPAP08519 4548 aa4.03□□□□□ -1.76
TNPO3-205ENST00000627585 LORP23490 312 aaPredicted RBP3.98□□□□□ -1.77
TNPO3-205ENST00000627585 MT2AP02795 61 aa3.95□□□□□ -1.78
TNPO3-205ENST00000627585 KRTAP15-1Q3LI76 137 aa3.93□□□□□ -1.78
TNPO3-205ENST00000627585 MT1FP04733 61 aa3.9□□□□□ -1.79
TNPO3-205ENST00000627585 LCE2CQ5TA81 110 aa3.89□□□□□ -1.79
TNPO3-205ENST00000627585 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
TNPO3-205ENST00000627585 RNF213Q63HN8 5207 aa3.83□□□□□ -1.8
TNPO3-205ENST00000627585 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
TNPO3-205ENST00000627585 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
TNPO3-205ENST00000627585 UBR4Q5T4S7 5183 aa3.8□□□□□ -1.8
TNPO3-205ENST00000627585 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
TNPO3-205ENST00000627585 KRTAP9-8Q9BYQ0 159 aa3.78□□□□□ -1.81
TNPO3-205ENST00000627585 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
TNPO3-205ENST00000627585 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
TNPO3-205ENST00000627585 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
TNPO3-205ENST00000627585 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
TNPO3-205ENST00000627585 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
TNPO3-205ENST00000627585 MUC2Q02817 5179 aa3.71□□□□□ -1.82
TNPO3-205ENST00000627585 LCE2DQ5TA82 110 aaPredicted RBP3.68□□□□□ -1.82
TNPO3-205ENST00000627585 KRTAP9-6A0A140TA67 174 aa3.68□□□□□ -1.82
TNPO3-205ENST00000627585 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
TNPO3-205ENST00000627585 KRTAP9-3Q9BYQ3 159 aa3.66□□□□□ -1.82
TNPO3-205ENST00000627585 LCE2AQ5TA79 106 aaPredicted RBP3.66□□□□□ -1.82
TNPO3-205ENST00000627585 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
TNPO3-205ENST00000627585 MT1BP07438 61 aa3.6□□□□□ -1.83
TNPO3-205ENST00000627585 KRTAP8-1Q8IUC2 63 aa3.59□□□□□ -1.83
TNPO3-205ENST00000627585 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
TNPO3-205ENST00000627585 LCE2BO14633 110 aa3.56□□□□□ -1.84
TNPO3-205ENST00000627585 SYNE1Q8NF91 8797 aaKnown RBP3.54□□□□□ -1.84
TNPO3-205ENST00000627585 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
TNPO3-205ENST00000627585 MT1XP80297 61 aa3.52□□□□□ -1.85
TNPO3-205ENST00000627585 FSIP2Q5CZC0 6907 aa3.51□□□□□ -1.85
TNPO3-205ENST00000627585 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
TNPO3-205ENST00000627585 INE1O15225 51 aa3.49□□□□□ -1.85
TNPO3-205ENST00000627585 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
TNPO3-205ENST00000627585 KRTAP10-7P60409 375 aaPredicted RBP3.46□□□□□ -1.86
TNPO3-205ENST00000627585 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
TNPO3-205ENST00000627585 SPRR2FQ96RM1 72 aa3.43□□□□□ -1.86
TNPO3-205ENST00000627585 KRTAP19-5Q3LI72 72 aa3.39□□□□□ -1.87
TNPO3-205ENST00000627585 KRTAP19-6Q3LI70 58 aa3.38□□□□□ -1.87
TNPO3-205ENST00000627585 KRTAP4-8A0A0G2JLE6 195 aa3.34□□□□□ -1.87
TNPO3-205ENST00000627585 KRTAP4-8Q9BYQ9 185 aa3.34□□□□□ -1.87
TNPO3-205ENST00000627585 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
TNPO3-205ENST00000627585 SPRR2EP22531 72 aa3.25□□□□□ -1.89
TNPO3-205ENST00000627585 SPRR2BP35325 72 aa3.25□□□□□ -1.89
TNPO3-205ENST00000627585 SPRR2AP35326 72 aa3.25□□□□□ -1.89
TNPO3-205ENST00000627585 USH2AO75445 5202 aa3.24□□□□□ -1.89
TNPO3-205ENST00000627585 KRTAP19-4Q3LI73 84 aa3.23□□□□□ -1.89
TNPO3-205ENST00000627585 LCE3CQ5T5A8 94 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms