RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
CHD2-209ENST00000627185 APOBP04114 4563 aaKnown RBP4.73□□□□□ -1.65
CHD2-209ENST00000627185 KRTAP10-4P60372 401 aaPredicted RBP4.72□□□□□ -1.65
CHD2-209ENST00000627185 C20orf166-AS1Q96NR2 134 aa4.7□□□□□ -1.66
CHD2-209ENST00000627185 PKHD1P08F94 4074 aa4.69□□□□□ -1.66
CHD2-209ENST00000627185 A8MUU9 505 aa4.69□□□□□ -1.66
CHD2-209ENST00000627185 C7orf65Q6ZTY9 151 aa4.68□□□□□ -1.66
CHD2-209ENST00000627185 LCA10Q71F78 164 aa4.68□□□□□ -1.66
CHD2-209ENST00000627185 A6NED7 52 aa4.67□□□□□ -1.66
CHD2-209ENST00000627185 FAT1Q14517 4588 aa4.67□□□□□ -1.66
CHD2-209ENST00000627185 PMAIP1Q13794 54 aa4.65□□□□□ -1.67
CHD2-209ENST00000627185 RYR2Q92736 4967 aa4.61□□□□□ -1.67
CHD2-209ENST00000627185 A6NN06 94 aa4.61□□□□□ -1.67
CHD2-209ENST00000627185 SPATA8Q6RVD6 105 aa4.61□□□□□ -1.67
CHD2-209ENST00000627185 SPTSSBQ8NFR3 76 aa4.61□□□□□ -1.67
CHD2-209ENST00000627185 A0A1B0GU69 56 aa4.6□□□□□ -1.67
CHD2-209ENST00000627185 SPINK7P58062 85 aa4.6□□□□□ -1.67
CHD2-209ENST00000627185 A8MU10 97 aa4.58□□□□□ -1.68
CHD2-209ENST00000627185 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
CHD2-209ENST00000627185 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
CHD2-209ENST00000627185 UQCR11O14957 56 aa4.57□□□□□ -1.68
CHD2-209ENST00000627185 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
CHD2-209ENST00000627185 TNXBP22105 4242 aa4.56□□□□□ -1.68
CHD2-209ENST00000627185 RETNLBQ9BQ08 111 aa4.55□□□□□ -1.68
CHD2-209ENST00000627185 SMR3BP02814 79 aaPredicted RBP4.53□□□□□ -1.68
CHD2-209ENST00000627185 HSPG2P98160 4391 aa4.53□□□□□ -1.68
CHD2-209ENST00000627185 SEC61GP60059 68 aa4.5□□□□□ -1.69
CHD2-209ENST00000627185 MIR22HGQ0VDD5 57 aa4.5□□□□□ -1.69
CHD2-209ENST00000627185 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
CHD2-209ENST00000627185 FLG2Q5D862 2391 aaPredicted RBP4.5□□□□□ -1.69
CHD2-209ENST00000627185 KMT2CQ8NEZ4 4911 aaKnown RBP4.47□□□□□ -1.69
CHD2-209ENST00000627185 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
CHD2-209ENST00000627185 RYR1P21817 5038 aa4.45□□□□□ -1.7
CHD2-209ENST00000627185 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
CHD2-209ENST00000627185 LRP1Q07954 4544 aaKnown RBP4.44□□□□□ -1.7
CHD2-209ENST00000627185 Q5VSD8 79 aa4.42□□□□□ -1.7
CHD2-209ENST00000627185 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
CHD2-209ENST00000627185 A0A1B0GU33 70 aa4.38□□□□□ -1.71
CHD2-209ENST00000627185 MT3P25713 68 aa4.38□□□□□ -1.71
CHD2-209ENST00000627185 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
CHD2-209ENST00000627185 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
CHD2-209ENST00000627185 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
CHD2-209ENST00000627185 H0YAA0 97 aa4.36□□□□□ -1.71
CHD2-209ENST00000627185 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
CHD2-209ENST00000627185 RYR3Q15413 4870 aa4.35□□□□□ -1.71
CHD2-209ENST00000627185 TPRXLQ17RH7 258 aa4.35□□□□□ -1.71
CHD2-209ENST00000627185 KRTAP2-2Q9BYT5 123 aa4.33□□□□□ -1.72
CHD2-209ENST00000627185 KRTAP10-6P60371 365 aaPredicted RBP4.3□□□□□ -1.72
CHD2-209ENST00000627185 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
CHD2-209ENST00000627185 K7ERS5 55 aa4.27□□□□□ -1.73
CHD2-209ENST00000627185 S4R3F8 94 aa4.27□□□□□ -1.73
CHD2-209ENST00000627185 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
CHD2-209ENST00000627185 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
CHD2-209ENST00000627185 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
CHD2-209ENST00000627185 M0QZ58 72 aa4.18□□□□□ -1.74
CHD2-209ENST00000627185 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
CHD2-209ENST00000627185 NDUFAF8A1L188 74 aa4.17□□□□□ -1.74
CHD2-209ENST00000627185 KRTAP25-1Q3LHN0 102 aa4.16□□□□□ -1.74
CHD2-209ENST00000627185 LRP2P98164 4655 aa4.16□□□□□ -1.74
CHD2-209ENST00000627185 ROMO1P60602 79 aa4.15□□□□□ -1.75
CHD2-209ENST00000627185 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
CHD2-209ENST00000627185 EPPK1P58107 5090 aaKnown RBP4.12□□□□□ -1.75
CHD2-209ENST00000627185 P0C880 135 aa4.12□□□□□ -1.75
CHD2-209ENST00000627185 MUC17Q685J3 4493 aa4.11□□□□□ -1.75
CHD2-209ENST00000627185 LPAP08519 4548 aa4.07□□□□□ -1.76
CHD2-209ENST00000627185 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
CHD2-209ENST00000627185 HERC2O95714 4834 aa4.04□□□□□ -1.76
CHD2-209ENST00000627185 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
CHD2-209ENST00000627185 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
CHD2-209ENST00000627185 ABCA13Q86UQ4 5058 aa4□□□□□ -1.77
CHD2-209ENST00000627185 A0A0D9SG42 100 aa4□□□□□ -1.77
CHD2-209ENST00000627185 BIRC6Q9NR09 4857 aa4□□□□□ -1.77
CHD2-209ENST00000627185 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
CHD2-209ENST00000627185 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
CHD2-209ENST00000627185 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
CHD2-209ENST00000627185 R4GN34 69 aa3.94□□□□□ -1.78
CHD2-209ENST00000627185 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
CHD2-209ENST00000627185 HERC1Q15751 4861 aa3.93□□□□□ -1.78
CHD2-209ENST00000627185 SPINT4Q6UDR6 99 aa3.91□□□□□ -1.78
CHD2-209ENST00000627185 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
CHD2-209ENST00000627185 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
CHD2-209ENST00000627185 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CHD2-209ENST00000627185 C10orf95Q9H7T3 257 aa3.8□□□□□ -1.8
CHD2-209ENST00000627185 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
CHD2-209ENST00000627185 LCE1EQ5T753 118 aa3.77□□□□□ -1.81
CHD2-209ENST00000627185 PCLOQ9Y6V0 5065 aa3.75□□□□□ -1.81
CHD2-209ENST00000627185 SPRR2GQ9BYE4 73 aa3.75□□□□□ -1.81
CHD2-209ENST00000627185 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
CHD2-209ENST00000627185 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
CHD2-209ENST00000627185 LCE3CQ5T5A8 94 aa3.69□□□□□ -1.82
CHD2-209ENST00000627185 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
CHD2-209ENST00000627185 MUC2Q02817 5179 aa3.66□□□□□ -1.82
CHD2-209ENST00000627185 TNP1P09430 55 aa3.66□□□□□ -1.82
CHD2-209ENST00000627185 KRTAP5-11Q6L8G4 156 aa3.66□□□□□ -1.82
CHD2-209ENST00000627185 MT1HP80294 61 aa3.63□□□□□ -1.83
CHD2-209ENST00000627185 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
CHD2-209ENST00000627185 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
CHD2-209ENST00000627185 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
CHD2-209ENST00000627185 MT2AP02795 61 aa3.56□□□□□ -1.84
CHD2-209ENST00000627185 FAT4Q6V0I7 4981 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms