RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 DNAH11Q96DT5 4516 aa7.96□□□□□ -1.14
FARP1-242ENST00000627049 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
FARP1-242ENST00000627049 DNAH8Q96JB1 4490 aa7.89□□□□□ -1.15
FARP1-242ENST00000627049 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
FARP1-242ENST00000627049 DNAH5Q8TE73 4624 aa7.86□□□□□ -1.15
FARP1-242ENST00000627049 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
FARP1-242ENST00000627049 DNAH2Q9P225 4427 aa7.77□□□□□ -1.17
FARP1-242ENST00000627049 INE1O15225 51 aa7.77□□□□□ -1.17
FARP1-242ENST00000627049 KRTAP23-1A1A580 65 aa7.76□□□□□ -1.17
FARP1-242ENST00000627049 DNAH3Q8TD57 4116 aa7.73□□□□□ -1.17
FARP1-242ENST00000627049 STARD9Q9P2P6 4700 aa7.72□□□□□ -1.17
FARP1-242ENST00000627049 LRP1BQ9NZR2 4599 aa7.7□□□□□ -1.18
FARP1-242ENST00000627049 ANK2Q01484 3957 aa7.6□□□□□ -1.19
FARP1-242ENST00000627049 FAT1Q14517 4588 aa7.56□□□□□ -1.2
FARP1-242ENST00000627049 KMT2AQ03164 3969 aa7.52□□□□□ -1.21
FARP1-242ENST00000627049 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
FARP1-242ENST00000627049 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
FARP1-242ENST00000627049 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
FARP1-242ENST00000627049 SACSQ9NZJ4 4579 aa7.5□□□□□ -1.21
FARP1-242ENST00000627049 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
FARP1-242ENST00000627049 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
FARP1-242ENST00000627049 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
FARP1-242ENST00000627049 DYNC2H1Q8NCM8 4307 aaKnown RBP7.47□□□□□ -1.21
FARP1-242ENST00000627049 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
FARP1-242ENST00000627049 KRTAP12-3P60328 96 aa7.44□□□□□ -1.22
FARP1-242ENST00000627049 VPS13BQ7Z7G8 4022 aa7.43□□□□□ -1.22
FARP1-242ENST00000627049 LYSTQ99698 3801 aa7.43□□□□□ -1.22
FARP1-242ENST00000627049 CMYA5Q8N3K9 4069 aa7.39□□□□□ -1.23
FARP1-242ENST00000627049 KRTAP4-1Q9BYQ7 146 aa7.35□□□□□ -1.23
FARP1-242ENST00000627049 HECTD4Q9Y4D8 3996 aa7.33□□□□□ -1.24
FARP1-242ENST00000627049 FAT2Q9NYQ8 4349 aa7.28□□□□□ -1.24
FARP1-242ENST00000627049 DNAH7Q8WXX0 4024 aa7.28□□□□□ -1.24
FARP1-242ENST00000627049 DNAH6Q9C0G6 4158 aa7.26□□□□□ -1.25
FARP1-242ENST00000627049 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
FARP1-242ENST00000627049 MYCBP2O75592 4640 aa7.25□□□□□ -1.25
FARP1-242ENST00000627049 RYR1P21817 5038 aa7.11□□□□□ -1.27
FARP1-242ENST00000627049 SPRR2GQ9BYE4 73 aa7.09□□□□□ -1.27
FARP1-242ENST00000627049 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
FARP1-242ENST00000627049 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
FARP1-242ENST00000627049 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
FARP1-242ENST00000627049 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
FARP1-242ENST00000627049 KIAA1109Q2LD37 5005 aa6.94□□□□□ -1.3
FARP1-242ENST00000627049 HYDINQ4G0P3 5121 aa6.92□□□□□ -1.3
FARP1-242ENST00000627049 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
FARP1-242ENST00000627049 MT2AP02795 61 aa6.89□□□□□ -1.31
FARP1-242ENST00000627049 KRTAP17-1Q9BYP8 105 aa6.87□□□□□ -1.31
FARP1-242ENST00000627049 MT1HP80294 61 aa6.87□□□□□ -1.31
FARP1-242ENST00000627049 PKHD1P08F94 4074 aa6.84□□□□□ -1.31
FARP1-242ENST00000627049 RYR3Q15413 4870 aa6.82□□□□□ -1.32
FARP1-242ENST00000627049 MT1FP04733 61 aa6.8□□□□□ -1.32
FARP1-242ENST00000627049 LRP2P98164 4655 aa6.79□□□□□ -1.32
FARP1-242ENST00000627049 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
FARP1-242ENST00000627049 PKD1P98161 4303 aa6.7□□□□□ -1.34
FARP1-242ENST00000627049 RYR2Q92736 4967 aa6.7□□□□□ -1.34
FARP1-242ENST00000627049 LCE3CQ5T5A8 94 aa6.68□□□□□ -1.34
FARP1-242ENST00000627049 KRTAP19-5Q3LI72 72 aa6.66□□□□□ -1.34
FARP1-242ENST00000627049 KRTAP10-5P60370 271 aa6.63□□□□□ -1.35
FARP1-242ENST00000627049 KRTAP19-8Q3LI54 63 aa6.6□□□□□ -1.35
FARP1-242ENST00000627049 PKHD1L1Q86WI1 4243 aa6.57□□□□□ -1.36
FARP1-242ENST00000627049 HSPG2P98160 4391 aa6.56□□□□□ -1.36
FARP1-242ENST00000627049 KMT2CQ8NEZ4 4911 aaKnown RBP6.54□□□□□ -1.36
FARP1-242ENST00000627049 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
FARP1-242ENST00000627049 MT1XP80297 61 aa6.5□□□□□ -1.37
FARP1-242ENST00000627049 LPAP08519 4548 aa6.44□□□□□ -1.38
FARP1-242ENST00000627049 TNXBP22105 4242 aa6.42□□□□□ -1.38
FARP1-242ENST00000627049 MT1BP07438 61 aa6.41□□□□□ -1.38
FARP1-242ENST00000627049 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
FARP1-242ENST00000627049 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
FARP1-242ENST00000627049 HERC2O95714 4834 aa6.38□□□□□ -1.39
FARP1-242ENST00000627049 LCE2CQ5TA81 110 aa6.36□□□□□ -1.39
FARP1-242ENST00000627049 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
FARP1-242ENST00000627049 SPRR2FQ96RM1 72 aa6.34□□□□□ -1.4
FARP1-242ENST00000627049 MUC17Q685J3 4493 aa6.26□□□□□ -1.41
FARP1-242ENST00000627049 FLGP20930 4061 aaPredicted RBP6.15□□□□□ -1.42
FARP1-242ENST00000627049 KRTAP9-3Q9BYQ3 159 aa6.13□□□□□ -1.43
FARP1-242ENST00000627049 KRTAP4-8A0A0G2JLE6 195 aa6.11□□□□□ -1.43
FARP1-242ENST00000627049 KRTAP4-8Q9BYQ9 185 aa6.11□□□□□ -1.43
FARP1-242ENST00000627049 HERC1Q15751 4861 aa6.08□□□□□ -1.44
FARP1-242ENST00000627049 BIRC6Q9NR09 4857 aa6.07□□□□□ -1.44
FARP1-242ENST00000627049 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
FARP1-242ENST00000627049 SPRR2EP22531 72 aa5.98□□□□□ -1.45
FARP1-242ENST00000627049 SPRR2BP35325 72 aa5.98□□□□□ -1.45
FARP1-242ENST00000627049 SPRR2AP35326 72 aa5.98□□□□□ -1.45
FARP1-242ENST00000627049 EPPK1P58107 5090 aaKnown RBP5.97□□□□□ -1.45
FARP1-242ENST00000627049 PCLOQ9Y6V0 5065 aa5.96□□□□□ -1.46
FARP1-242ENST00000627049 ABCA13Q86UQ4 5058 aa5.96□□□□□ -1.46
FARP1-242ENST00000627049 MT1GP13640 62 aa5.94□□□□□ -1.46
FARP1-242ENST00000627049 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
FARP1-242ENST00000627049 LCE3BQ5TA77 95 aa5.87□□□□□ -1.47
FARP1-242ENST00000627049 MT1LQ93083 61 aa5.83□□□□□ -1.48
FARP1-242ENST00000627049 LCE2BO14633 110 aa5.81□□□□□ -1.48
FARP1-242ENST00000627049 SPRR2DP22532 72 aa5.81□□□□□ -1.48
FARP1-242ENST00000627049 HMCN2Q8NDA2 5059 aa5.76□□□□□ -1.49
FARP1-242ENST00000627049 MT1EP04732 61 aa5.75□□□□□ -1.49
FARP1-242ENST00000627049 MUC2Q02817 5179 aa5.71□□□□□ -1.5
FARP1-242ENST00000627049 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
FARP1-242ENST00000627049 LCE3DQ9BYE3 92 aa5.66□□□□□ -1.5
FARP1-242ENST00000627049 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.51
FARP1-242ENST00000627049 KRTAP2-3P0C7H8 128 aa5.64□□□□□ -1.51
FARP1-242ENST00000627049 KRTAP2-4Q9BYR9 128 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms