RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 S4R3F8 94 aa7.8□□□□□ -1.16
PMS1-221ENST00000624204 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
PMS1-221ENST00000624204 DNHD1Q96M86 4753 aa7.79□□□□□ -1.16
PMS1-221ENST00000624204 KRTAP3-2Q9BYR7 98 aa7.78□□□□□ -1.16
PMS1-221ENST00000624204 PKD1P98161 4303 aa7.77□□□□□ -1.17
PMS1-221ENST00000624204 KRTAP12-2P59991 146 aa7.76□□□□□ -1.17
PMS1-221ENST00000624204 KRTAP10-8P60410 259 aa7.7□□□□□ -1.18
PMS1-221ENST00000624204 DYNC1H1Q14204 4646 aaKnown RBP7.66□□□□□ -1.18
PMS1-221ENST00000624204 LRP1Q07954 4544 aaKnown RBP7.62□□□□□ -1.19
PMS1-221ENST00000624204 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
PMS1-221ENST00000624204 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
PMS1-221ENST00000624204 APOBP04114 4563 aaKnown RBP7.59□□□□□ -1.19
PMS1-221ENST00000624204 HSPG2P98160 4391 aa7.56□□□□□ -1.2
PMS1-221ENST00000624204 XP32Q5T750 250 aa7.55□□□□□ -1.2
PMS1-221ENST00000624204 A0A0A0MQY5 61 aa7.53□□□□□ -1.2
PMS1-221ENST00000624204 FAT3Q8TDW7 4589 aa7.53□□□□□ -1.2
PMS1-221ENST00000624204 PKHD1L1Q86WI1 4243 aa7.46□□□□□ -1.22
PMS1-221ENST00000624204 M0QZ58 72 aa7.46□□□□□ -1.22
PMS1-221ENST00000624204 KRTAP10-4P60372 401 aaPredicted RBP7.45□□□□□ -1.22
PMS1-221ENST00000624204 LPAP08519 4548 aa7.44□□□□□ -1.22
PMS1-221ENST00000624204 LUZP6Q538Z0 58 aa7.42□□□□□ -1.22
PMS1-221ENST00000624204 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
PMS1-221ENST00000624204 R4GN34 69 aa7.37□□□□□ -1.23
PMS1-221ENST00000624204 LRP2P98164 4655 aa7.31□□□□□ -1.24
PMS1-221ENST00000624204 KMT2CQ8NEZ4 4911 aaKnown RBP7.29□□□□□ -1.24
PMS1-221ENST00000624204 Q5VSD8 79 aa7.22□□□□□ -1.25
PMS1-221ENST00000624204 A0A1B0GVY2 172 aa7.21□□□□□ -1.26
PMS1-221ENST00000624204 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
PMS1-221ENST00000624204 LORP23490 312 aaPredicted RBP7.16□□□□□ -1.26
PMS1-221ENST00000624204 TNXBP22105 4242 aa7.14□□□□□ -1.27
PMS1-221ENST00000624204 RYR1P21817 5038 aa7.12□□□□□ -1.27
PMS1-221ENST00000624204 KIAA1109Q2LD37 5005 aa7.04□□□□□ -1.28
PMS1-221ENST00000624204 PP632Q6XCG6 107 aa6.96□□□□□ -1.3
PMS1-221ENST00000624204 KRTAP21-3Q3LHN1 58 aa6.94□□□□□ -1.3
PMS1-221ENST00000624204 KRTAP17-1Q9BYP8 105 aa6.93□□□□□ -1.3
PMS1-221ENST00000624204 MUC2Q02817 5179 aa6.91□□□□□ -1.3
PMS1-221ENST00000624204 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PMS1-221ENST00000624204 ABCA13Q86UQ4 5058 aa6.89□□□□□ -1.31
PMS1-221ENST00000624204 RYR3Q15413 4870 aa6.88□□□□□ -1.31
PMS1-221ENST00000624204 RYR2Q92736 4967 aa6.84□□□□□ -1.31
PMS1-221ENST00000624204 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
PMS1-221ENST00000624204 TNP1P09430 55 aa6.72□□□□□ -1.33
PMS1-221ENST00000624204 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
PMS1-221ENST00000624204 KRTAP4-1Q9BYQ7 146 aa6.67□□□□□ -1.34
PMS1-221ENST00000624204 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
PMS1-221ENST00000624204 SPRR5A0A1B0GTR4 108 aa6.58□□□□□ -1.36
PMS1-221ENST00000624204 J3QL48 77 aa6.57□□□□□ -1.36
PMS1-221ENST00000624204 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
PMS1-221ENST00000624204 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.36
PMS1-221ENST00000624204 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
PMS1-221ENST00000624204 PRO2289Q9P1D8 64 aa6.42□□□□□ -1.38
PMS1-221ENST00000624204 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
PMS1-221ENST00000624204 M0R2T5 61 aa6.4□□□□□ -1.38
PMS1-221ENST00000624204 PCLOQ9Y6V0 5065 aa6.38□□□□□ -1.39
PMS1-221ENST00000624204 LCE3AQ5TA76 89 aa6.34□□□□□ -1.4
PMS1-221ENST00000624204 HERC2O95714 4834 aa6.26□□□□□ -1.41
PMS1-221ENST00000624204 RNF213Q63HN8 5207 aa6.26□□□□□ -1.41
PMS1-221ENST00000624204 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
PMS1-221ENST00000624204 INE1O15225 51 aa6.23□□□□□ -1.41
PMS1-221ENST00000624204 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
PMS1-221ENST00000624204 HERC1Q15751 4861 aa6.18□□□□□ -1.42
PMS1-221ENST00000624204 KRTAP10-10P60014 251 aa6.12□□□□□ -1.43
PMS1-221ENST00000624204 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.44
PMS1-221ENST00000624204 SPRR2GQ9BYE4 73 aa6.08□□□□□ -1.44
PMS1-221ENST00000624204 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
PMS1-221ENST00000624204 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
PMS1-221ENST00000624204 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
PMS1-221ENST00000624204 KMT2DO14686 5537 aa5.95□□□□□ -1.46
PMS1-221ENST00000624204 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
PMS1-221ENST00000624204 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
PMS1-221ENST00000624204 LCE2CQ5TA81 110 aa5.87□□□□□ -1.47
PMS1-221ENST00000624204 MT1FP04733 61 aa5.85□□□□□ -1.47
PMS1-221ENST00000624204 USH2AO75445 5202 aa5.84□□□□□ -1.47
PMS1-221ENST00000624204 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
PMS1-221ENST00000624204 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
PMS1-221ENST00000624204 MT2AP02795 61 aa5.78□□□□□ -1.48
PMS1-221ENST00000624204 MT1XP80297 61 aa5.77□□□□□ -1.49
PMS1-221ENST00000624204 MT1HP80294 61 aa5.74□□□□□ -1.49
PMS1-221ENST00000624204 MT1BP07438 61 aa5.7□□□□□ -1.5
PMS1-221ENST00000624204 KRTAP19-8Q3LI54 63 aa5.68□□□□□ -1.5
PMS1-221ENST00000624204 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
PMS1-221ENST00000624204 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
PMS1-221ENST00000624204 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
PMS1-221ENST00000624204 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
PMS1-221ENST00000624204 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
PMS1-221ENST00000624204 KRTAP4-8Q9BYQ9 185 aa5.52□□□□□ -1.53
PMS1-221ENST00000624204 FSIP2Q5CZC0 6907 aa5.51□□□□□ -1.53
PMS1-221ENST00000624204 KRTAP9-6A8MVA2 160 aa5.48□□□□□ -1.53
PMS1-221ENST00000624204 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
PMS1-221ENST00000624204 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
PMS1-221ENST00000624204 DSTQ03001 7570 aaKnown RBP5.37□□□□□ -1.55
PMS1-221ENST00000624204 KRTAP9-3Q9BYQ3 159 aa5.37□□□□□ -1.55
PMS1-221ENST00000624204 KRTAP2-3P0C7H8 128 aa5.33□□□□□ -1.56
PMS1-221ENST00000624204 KRTAP2-4Q9BYR9 128 aa5.33□□□□□ -1.56
PMS1-221ENST00000624204 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
PMS1-221ENST00000624204 SYNE1Q8NF91 8797 aaKnown RBP5.31□□□□□ -1.56
PMS1-221ENST00000624204 FCGBPQ9Y6R7 5405 aaPredicted RBP5.3□□□□□ -1.56
PMS1-221ENST00000624204 LCE2BO14633 110 aa5.17□□□□□ -1.58
PMS1-221ENST00000624204 LOC100996750A0A140TA64 210 aa5.15□□□□□ -1.59
PMS1-221ENST00000624204 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms