RNA–Protein interactions for RNA: ENST00000622829.4

GTF2IP1-210, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2IP1, Length 3,605 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-210ENST00000622829 KRTAP12-2P59991 146 aa9.39□□□□□ -0.91
GTF2IP1-210ENST00000622829 Q5VSD8 79 aa9.37□□□□□ -0.91
GTF2IP1-210ENST00000622829 R4GN34 69 aa9.37□□□□□ -0.91
GTF2IP1-210ENST00000622829 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
GTF2IP1-210ENST00000622829 PKHD1P08F94 4074 aa9.31□□□□□ -0.92
GTF2IP1-210ENST00000622829 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
GTF2IP1-210ENST00000622829 XP32Q5T750 250 aa9.26□□□□□ -0.93
GTF2IP1-210ENST00000622829 FAT3Q8TDW7 4589 aa9.25□□□□□ -0.93
GTF2IP1-210ENST00000622829 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
GTF2IP1-210ENST00000622829 DYNC1H1Q14204 4646 aaKnown RBP9.23□□□□□ -0.93
GTF2IP1-210ENST00000622829 CAMK2N1Q7Z7J9 78 aa9.23□□□□□ -0.93
GTF2IP1-210ENST00000622829 LRP1Q07954 4544 aaKnown RBP9.22□□□□□ -0.93
GTF2IP1-210ENST00000622829 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
GTF2IP1-210ENST00000622829 SACSQ9NZJ4 4579 aa9.19□□□□□ -0.94
GTF2IP1-210ENST00000622829 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
GTF2IP1-210ENST00000622829 KMT2CQ8NEZ4 4911 aaKnown RBP9.15□□□□□ -0.94
GTF2IP1-210ENST00000622829 KRTAP12-1P59990 96 aa9.12□□□□□ -0.95
GTF2IP1-210ENST00000622829 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
GTF2IP1-210ENST00000622829 PKD1P98161 4303 aa9.11□□□□□ -0.95
GTF2IP1-210ENST00000622829 LUZP6Q538Z0 58 aa9.1□□□□□ -0.95
GTF2IP1-210ENST00000622829 RYR2Q92736 4967 aa8.97□□□□□ -0.97
GTF2IP1-210ENST00000622829 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
GTF2IP1-210ENST00000622829 PLAC4Q8WY50 150 aa8.95□□□□□ -0.98
GTF2IP1-210ENST00000622829 J3QL48 77 aa8.91□□□□□ -0.98
GTF2IP1-210ENST00000622829 KRTAP10-4P60372 401 aaPredicted RBP8.9□□□□□ -0.98
GTF2IP1-210ENST00000622829 A0A1B0GVY2 172 aa8.88□□□□□ -0.99
GTF2IP1-210ENST00000622829 A0A0A0MQY5 61 aa8.88□□□□□ -0.99
GTF2IP1-210ENST00000622829 RYR3Q15413 4870 aa8.88□□□□□ -0.99
GTF2IP1-210ENST00000622829 HSPG2P98160 4391 aa8.85□□□□□ -0.99
GTF2IP1-210ENST00000622829 LRP2P98164 4655 aa8.83□□□□□ -1
GTF2IP1-210ENST00000622829 KIAA1109Q2LD37 5005 aa8.78□□□□□ -1
GTF2IP1-210ENST00000622829 RYR1P21817 5038 aa8.76□□□□□ -1.01
GTF2IP1-210ENST00000622829 LORP23490 312 aaPredicted RBP8.73□□□□□ -1.01
GTF2IP1-210ENST00000622829 LPAP08519 4548 aa8.68□□□□□ -1.02
GTF2IP1-210ENST00000622829 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
GTF2IP1-210ENST00000622829 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
GTF2IP1-210ENST00000622829 M0R2T5 61 aa8.58□□□□□ -1.04
GTF2IP1-210ENST00000622829 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
GTF2IP1-210ENST00000622829 MT1HL1P0DM35 61 aa8.54□□□□□ -1.04
GTF2IP1-210ENST00000622829 KRTAP4-5Q9BYR2 181 aa8.45□□□□□ -1.06
GTF2IP1-210ENST00000622829 PKHD1L1Q86WI1 4243 aa8.44□□□□□ -1.06
GTF2IP1-210ENST00000622829 TNP1P09430 55 aa8.43□□□□□ -1.06
GTF2IP1-210ENST00000622829 MUC2Q02817 5179 aa8.35□□□□□ -1.07
GTF2IP1-210ENST00000622829 TNXBP22105 4242 aa8.28□□□□□ -1.08
GTF2IP1-210ENST00000622829 PP632Q6XCG6 107 aa8.25□□□□□ -1.09
GTF2IP1-210ENST00000622829 KRTAP4-1Q9BYQ7 146 aa8.24□□□□□ -1.09
GTF2IP1-210ENST00000622829 ABCA13Q86UQ4 5058 aa8.2□□□□□ -1.1
GTF2IP1-210ENST00000622829 HERC2O95714 4834 aa8.06□□□□□ -1.12
GTF2IP1-210ENST00000622829 KRTAP10-10P60014 251 aa7.96□□□□□ -1.13
GTF2IP1-210ENST00000622829 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
GTF2IP1-210ENST00000622829 FAT4Q6V0I7 4981 aa7.94□□□□□ -1.14
GTF2IP1-210ENST00000622829 PCLOQ9Y6V0 5065 aa7.84□□□□□ -1.15
GTF2IP1-210ENST00000622829 HERC1Q15751 4861 aa7.81□□□□□ -1.16
GTF2IP1-210ENST00000622829 LCE3AQ5TA76 89 aa7.79□□□□□ -1.16
GTF2IP1-210ENST00000622829 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
GTF2IP1-210ENST00000622829 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
GTF2IP1-210ENST00000622829 MUC17Q685J3 4493 aa7.47□□□□□ -1.21
GTF2IP1-210ENST00000622829 UBR4Q5T4S7 5183 aa7.41□□□□□ -1.22
GTF2IP1-210ENST00000622829 KRTAP12-3P60328 96 aa7.4□□□□□ -1.23
GTF2IP1-210ENST00000622829 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
GTF2IP1-210ENST00000622829 KRTAP10-12P60413 245 aa7.35□□□□□ -1.23
GTF2IP1-210ENST00000622829 KRTAP19-1Q8IUB9 90 aa7.35□□□□□ -1.23
GTF2IP1-210ENST00000622829 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
GTF2IP1-210ENST00000622829 FLGP20930 4061 aaPredicted RBP7.33□□□□□ -1.24
GTF2IP1-210ENST00000622829 MT1FP04733 61 aa7.3□□□□□ -1.24
GTF2IP1-210ENST00000622829 FSIP2Q5CZC0 6907 aa7.24□□□□□ -1.25
GTF2IP1-210ENST00000622829 SPRR5A0A1B0GTR4 108 aa7.21□□□□□ -1.25
GTF2IP1-210ENST00000622829 MT2AP02795 61 aa7.21□□□□□ -1.25
GTF2IP1-210ENST00000622829 SPRR2GQ9BYE4 73 aa7.21□□□□□ -1.25
GTF2IP1-210ENST00000622829 KRTAP23-1A1A580 65 aa7.2□□□□□ -1.26
GTF2IP1-210ENST00000622829 MT1HP80294 61 aa7.19□□□□□ -1.26
GTF2IP1-210ENST00000622829 KMT2DO14686 5537 aa7.19□□□□□ -1.26
GTF2IP1-210ENST00000622829 USH2AO75445 5202 aa7.17□□□□□ -1.26
GTF2IP1-210ENST00000622829 OBSCNQ5VST9 7968 aa7.16□□□□□ -1.26
GTF2IP1-210ENST00000622829 KRTAP10-7P60409 375 aaPredicted RBP7.12□□□□□ -1.27
GTF2IP1-210ENST00000622829 INE1O15225 51 aa7.1□□□□□ -1.27
GTF2IP1-210ENST00000622829 LCE2CQ5TA81 110 aa7.09□□□□□ -1.27
GTF2IP1-210ENST00000622829 KRTAP8-1Q8IUC2 63 aa7.04□□□□□ -1.28
GTF2IP1-210ENST00000622829 CRCT1Q9UGL9 99 aa7□□□□□ -1.29
GTF2IP1-210ENST00000622829 MT1XP80297 61 aa6.97□□□□□ -1.29
GTF2IP1-210ENST00000622829 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
GTF2IP1-210ENST00000622829 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
GTF2IP1-210ENST00000622829 MT1BP07438 61 aa6.9□□□□□ -1.3
GTF2IP1-210ENST00000622829 KRTAP9-8Q9BYQ0 159 aa6.89□□□□□ -1.31
GTF2IP1-210ENST00000622829 KRTAP4-8A0A0G2JLE6 195 aa6.88□□□□□ -1.31
GTF2IP1-210ENST00000622829 KRTAP4-8Q9BYQ9 185 aa6.88□□□□□ -1.31
GTF2IP1-210ENST00000622829 SYNE1Q8NF91 8797 aaKnown RBP6.88□□□□□ -1.31
GTF2IP1-210ENST00000622829 DSTQ03001 7570 aaKnown RBP6.85□□□□□ -1.31
GTF2IP1-210ENST00000622829 KRTAP4-7Q9BYR0 210 aa6.83□□□□□ -1.32
GTF2IP1-210ENST00000622829 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
GTF2IP1-210ENST00000622829 FCGBPQ9Y6R7 5405 aaPredicted RBP6.72□□□□□ -1.33
GTF2IP1-210ENST00000622829 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
GTF2IP1-210ENST00000622829 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
GTF2IP1-210ENST00000622829 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
GTF2IP1-210ENST00000622829 LCE2BO14633 110 aa6.46□□□□□ -1.38
GTF2IP1-210ENST00000622829 LCE2AQ5TA79 106 aaPredicted RBP6.36□□□□□ -1.39
GTF2IP1-210ENST00000622829 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
GTF2IP1-210ENST00000622829 MUC12Q9UKN1 5478 aa6.3□□□□□ -1.4
GTF2IP1-210ENST00000622829 KRTAP4-3Q9BYR4 195 aa6.29□□□□□ -1.4
GTF2IP1-210ENST00000622829 MT1GP13640 62 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms