RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 KRTAP10-8P60410 259 aa6.76□□□□□ -1.33
CYFIP1-211ENST00000619348 KRTAP3-3Q9BYR6 98 aa6.7□□□□□ -1.34
CYFIP1-211ENST00000619348 HYDINQ4G0P3 5121 aa6.69□□□□□ -1.34
CYFIP1-211ENST00000619348 PKHD1P08F94 4074 aa6.69□□□□□ -1.34
CYFIP1-211ENST00000619348 FAT2Q9NYQ8 4349 aa6.69□□□□□ -1.34
CYFIP1-211ENST00000619348 M0QZ58 72 aa6.68□□□□□ -1.34
CYFIP1-211ENST00000619348 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
CYFIP1-211ENST00000619348 XP32Q5T750 250 aa6.65□□□□□ -1.35
CYFIP1-211ENST00000619348 R4GN34 69 aa6.65□□□□□ -1.35
CYFIP1-211ENST00000619348 DYNC1H1Q14204 4646 aaKnown RBP6.63□□□□□ -1.35
CYFIP1-211ENST00000619348 Q5VSD8 79 aa6.62□□□□□ -1.35
CYFIP1-211ENST00000619348 KRTAP12-1P59990 96 aa6.61□□□□□ -1.35
CYFIP1-211ENST00000619348 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
CYFIP1-211ENST00000619348 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
CYFIP1-211ENST00000619348 LRP1Q07954 4544 aaKnown RBP6.56□□□□□ -1.36
CYFIP1-211ENST00000619348 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
CYFIP1-211ENST00000619348 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
CYFIP1-211ENST00000619348 LUZP6Q538Z0 58 aa6.5□□□□□ -1.37
CYFIP1-211ENST00000619348 PKD1P98161 4303 aa6.5□□□□□ -1.37
CYFIP1-211ENST00000619348 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
CYFIP1-211ENST00000619348 KRTAP10-4P60372 401 aaPredicted RBP6.49□□□□□ -1.37
CYFIP1-211ENST00000619348 FAT3Q8TDW7 4589 aa6.47□□□□□ -1.37
CYFIP1-211ENST00000619348 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
CYFIP1-211ENST00000619348 A0A1B0GVY2 172 aa6.43□□□□□ -1.38
CYFIP1-211ENST00000619348 HSPG2P98160 4391 aa6.39□□□□□ -1.39
CYFIP1-211ENST00000619348 LRP2P98164 4655 aa6.3□□□□□ -1.4
CYFIP1-211ENST00000619348 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
CYFIP1-211ENST00000619348 KMT2CQ8NEZ4 4911 aaKnown RBP6.22□□□□□ -1.41
CYFIP1-211ENST00000619348 LPAP08519 4548 aa6.2□□□□□ -1.42
CYFIP1-211ENST00000619348 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
CYFIP1-211ENST00000619348 J3QL48 77 aa6.18□□□□□ -1.42
CYFIP1-211ENST00000619348 PKHD1L1Q86WI1 4243 aa6.17□□□□□ -1.42
CYFIP1-211ENST00000619348 SEC61BP60468 96 aaKnown RBP6.17□□□□□ -1.42
CYFIP1-211ENST00000619348 MT1HL1P0DM35 61 aa6.15□□□□□ -1.42
CYFIP1-211ENST00000619348 RYR1P21817 5038 aa6.15□□□□□ -1.42
CYFIP1-211ENST00000619348 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
CYFIP1-211ENST00000619348 KRTAP17-1Q9BYP8 105 aa6.05□□□□□ -1.44
CYFIP1-211ENST00000619348 RYR3Q15413 4870 aa6.05□□□□□ -1.44
CYFIP1-211ENST00000619348 TNP1P09430 55 aa6.04□□□□□ -1.44
CYFIP1-211ENST00000619348 TNXBP22105 4242 aa6□□□□□ -1.45
CYFIP1-211ENST00000619348 RYR2Q92736 4967 aa5.98□□□□□ -1.45
CYFIP1-211ENST00000619348 KRTAP4-5Q9BYR2 181 aa5.93□□□□□ -1.46
CYFIP1-211ENST00000619348 M0R2T5 61 aa5.91□□□□□ -1.46
CYFIP1-211ENST00000619348 KRTAP4-1Q9BYQ7 146 aa5.89□□□□□ -1.47
CYFIP1-211ENST00000619348 ABCA13Q86UQ4 5058 aa5.85□□□□□ -1.47
CYFIP1-211ENST00000619348 MUC2Q02817 5179 aa5.83□□□□□ -1.48
CYFIP1-211ENST00000619348 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
CYFIP1-211ENST00000619348 KRTAP21-3Q3LHN1 58 aa5.8□□□□□ -1.48
CYFIP1-211ENST00000619348 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
CYFIP1-211ENST00000619348 KRTAP10-10P60014 251 aa5.58□□□□□ -1.52
CYFIP1-211ENST00000619348 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
CYFIP1-211ENST00000619348 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
CYFIP1-211ENST00000619348 HERC2O95714 4834 aa5.55□□□□□ -1.52
CYFIP1-211ENST00000619348 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
CYFIP1-211ENST00000619348 KRTAP19-2Q3LHN2 52 aa5.44□□□□□ -1.54
CYFIP1-211ENST00000619348 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CYFIP1-211ENST00000619348 SPRR5A0A1B0GTR4 108 aa5.41□□□□□ -1.54
CYFIP1-211ENST00000619348 PRO2289Q9P1D8 64 aa5.4□□□□□ -1.54
CYFIP1-211ENST00000619348 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
CYFIP1-211ENST00000619348 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
CYFIP1-211ENST00000619348 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
CYFIP1-211ENST00000619348 HERC1Q15751 4861 aa5.34□□□□□ -1.55
CYFIP1-211ENST00000619348 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
CYFIP1-211ENST00000619348 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
CYFIP1-211ENST00000619348 SPRR2GQ9BYE4 73 aa5.29□□□□□ -1.56
CYFIP1-211ENST00000619348 KRTAP10-12P60413 245 aa5.27□□□□□ -1.57
CYFIP1-211ENST00000619348 INE1O15225 51 aa5.27□□□□□ -1.57
CYFIP1-211ENST00000619348 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
CYFIP1-211ENST00000619348 MT1FP04733 61 aa5.22□□□□□ -1.57
CYFIP1-211ENST00000619348 MT2AP02795 61 aa5.18□□□□□ -1.58
CYFIP1-211ENST00000619348 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
CYFIP1-211ENST00000619348 MT1HP80294 61 aa5.16□□□□□ -1.58
CYFIP1-211ENST00000619348 LCE2CQ5TA81 110 aa5.15□□□□□ -1.58
CYFIP1-211ENST00000619348 BIRC6Q9NR09 4857 aa5.12□□□□□ -1.59
CYFIP1-211ENST00000619348 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
CYFIP1-211ENST00000619348 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.6
CYFIP1-211ENST00000619348 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
CYFIP1-211ENST00000619348 MT1XP80297 61 aa5.05□□□□□ -1.6
CYFIP1-211ENST00000619348 MT1BP07438 61 aa5□□□□□ -1.61
CYFIP1-211ENST00000619348 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
CYFIP1-211ENST00000619348 KMT2DO14686 5537 aa4.97□□□□□ -1.61
CYFIP1-211ENST00000619348 KRTAP19-5Q3LI72 72 aa4.96□□□□□ -1.62
CYFIP1-211ENST00000619348 USH2AO75445 5202 aa4.94□□□□□ -1.62
CYFIP1-211ENST00000619348 KRTAP19-8Q3LI54 63 aa4.93□□□□□ -1.62
CYFIP1-211ENST00000619348 LCE2BO14633 110 aa4.9□□□□□ -1.63
CYFIP1-211ENST00000619348 LCE3CQ5T5A8 94 aa4.89□□□□□ -1.63
CYFIP1-211ENST00000619348 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
CYFIP1-211ENST00000619348 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
CYFIP1-211ENST00000619348 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
CYFIP1-211ENST00000619348 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
CYFIP1-211ENST00000619348 CRCT1Q9UGL9 99 aa4.76□□□□□ -1.65
CYFIP1-211ENST00000619348 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
CYFIP1-211ENST00000619348 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
CYFIP1-211ENST00000619348 OBSCNQ5VST9 7968 aa4.6□□□□□ -1.67
CYFIP1-211ENST00000619348 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
CYFIP1-211ENST00000619348 DSTQ03001 7570 aaKnown RBP4.59□□□□□ -1.68
CYFIP1-211ENST00000619348 SYNE1Q8NF91 8797 aaKnown RBP4.58□□□□□ -1.68
CYFIP1-211ENST00000619348 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
CYFIP1-211ENST00000619348 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
CYFIP1-211ENST00000619348 LOC100996750A0A140TA64 210 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms