RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 KTN1-AS1Q86SY8 53 aa13.41□□□□□ -0.26
VEGFC-202ENST00000618562 RPL37P61927 97 aaKnown RBP13.39□□□□□ -0.27
VEGFC-202ENST00000618562 KRTAP3-1Q9BYR8 98 aa13.34□□□□□ -0.27
VEGFC-202ENST00000618562 MIR22HGQ0VDD5 57 aa13.33□□□□□ -0.27
VEGFC-202ENST00000618562 J3QL48 77 aa13.33□□□□□ -0.28
VEGFC-202ENST00000618562 TPRXLQ17RH7 258 aa13.32□□□□□ -0.28
VEGFC-202ENST00000618562 SEC61GP60059 68 aa13.32□□□□□ -0.28
VEGFC-202ENST00000618562 COX6B2Q6YFQ2 88 aa13.22□□□□□ -0.29
VEGFC-202ENST00000618562 LPAP08519 4548 aa13.17□□□□□ -0.3
VEGFC-202ENST00000618562 LRP2P98164 4655 aa13.15□□□□□ -0.3
VEGFC-202ENST00000618562 PCLOQ9Y6V0 5065 aa13.05□□□□□ -0.32
VEGFC-202ENST00000618562 A0A1B0GU33 70 aa12.97□□□□□ -0.33
VEGFC-202ENST00000618562 H0YAA0 97 aa12.95□□□□□ -0.34
VEGFC-202ENST00000618562 H1FX-AS1Q4G0G2 97 aa12.94□□□□□ -0.34
VEGFC-202ENST00000618562 RBM12B-AS1Q9P1G2 102 aa12.94□□□□□ -0.34
VEGFC-202ENST00000618562 SEC61BP60468 96 aaKnown RBP12.82□□□□□ -0.36
VEGFC-202ENST00000618562 KRTAP3-3Q9BYR6 98 aa12.81□□□□□ -0.36
VEGFC-202ENST00000618562 HERC1Q15751 4861 aa12.8□□□□□ -0.36
VEGFC-202ENST00000618562 PRAC1Q96KF2 57 aa12.76□□□□□ -0.37
VEGFC-202ENST00000618562 ADM2Q7Z4H4 148 aa12.76□□□□□ -0.37
VEGFC-202ENST00000618562 S4R3F8 94 aa12.76□□□□□ -0.37
VEGFC-202ENST00000618562 KRTAP4-1Q9BYQ7 146 aa12.66□□□□□ -0.38
VEGFC-202ENST00000618562 HMCN2Q8NDA2 5059 aa12.65□□□□□ -0.38
VEGFC-202ENST00000618562 KRTAP10-6P60371 365 aaPredicted RBP12.65□□□□□ -0.39
VEGFC-202ENST00000618562 MUC17Q685J3 4493 aa12.62□□□□□ -0.39
VEGFC-202ENST00000618562 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.4
VEGFC-202ENST00000618562 K7ERS5 55 aa12.55□□□□□ -0.4
VEGFC-202ENST00000618562 CSAG1Q6PB30 78 aa12.47□□□□□ -0.41
VEGFC-202ENST00000618562 KRTAP13-4Q3LI77 160 aa12.43□□□□□ -0.42
VEGFC-202ENST00000618562 P0C880 135 aa12.39□□□□□ -0.43
VEGFC-202ENST00000618562 LINC01554Q52M75 96 aa12.36□□□□□ -0.43
VEGFC-202ENST00000618562 KRTAP19-2Q3LHN2 52 aa12.36□□□□□ -0.43
VEGFC-202ENST00000618562 MUC2Q02817 5179 aa12.33□□□□□ -0.44
VEGFC-202ENST00000618562 A0A0D9SG42 100 aa12.28□□□□□ -0.44
VEGFC-202ENST00000618562 KRTAP25-1Q3LHN0 102 aa12.23□□□□□ -0.45
VEGFC-202ENST00000618562 ROMO1P60602 79 aa12.2□□□□□ -0.46
VEGFC-202ENST00000618562 M0QZ58 72 aa12.12□□□□□ -0.47
VEGFC-202ENST00000618562 UBR4Q5T4S7 5183 aa12.09□□□□□ -0.47
VEGFC-202ENST00000618562 FLGP20930 4061 aaPredicted RBP12.03□□□□□ -0.48
VEGFC-202ENST00000618562 KRTAP12-2P59991 146 aa12.02□□□□□ -0.48
VEGFC-202ENST00000618562 RNF213Q63HN8 5207 aa12.01□□□□□ -0.49
VEGFC-202ENST00000618562 KRTAP12-1P59990 96 aa12□□□□□ -0.49
VEGFC-202ENST00000618562 LCE2CQ5TA81 110 aa11.97□□□□□ -0.49
VEGFC-202ENST00000618562 CRIPTQ9P021 101 aa11.95□□□□□ -0.5
VEGFC-202ENST00000618562 SPINT4Q6UDR6 99 aa11.91□□□□□ -0.5
VEGFC-202ENST00000618562 FAT4Q6V0I7 4981 aa11.81□□□□□ -0.52
VEGFC-202ENST00000618562 R4GN34 69 aa11.81□□□□□ -0.52
VEGFC-202ENST00000618562 MT1HP80294 61 aa11.69□□□□□ -0.54
VEGFC-202ENST00000618562 LORP23490 312 aaPredicted RBP11.67□□□□□ -0.54
VEGFC-202ENST00000618562 C10orf95Q9H7T3 257 aa11.62□□□□□ -0.55
VEGFC-202ENST00000618562 M0R2T5 61 aa11.56□□□□□ -0.56
VEGFC-202ENST00000618562 KRTAP9-8Q9BYQ0 159 aa11.3□□□□□ -0.6
VEGFC-202ENST00000618562 MT2AP02795 61 aa11.29□□□□□ -0.6
VEGFC-202ENST00000618562 MT1FP04733 61 aa11.24□□□□□ -0.61
VEGFC-202ENST00000618562 KRTAP10-10P60014 251 aa11.18□□□□□ -0.62
VEGFC-202ENST00000618562 CAMK2N1Q7Z7J9 78 aa11.16□□□□□ -0.62
VEGFC-202ENST00000618562 SPRR2GQ9BYE4 73 aa11.15□□□□□ -0.63
VEGFC-202ENST00000618562 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
VEGFC-202ENST00000618562 KRTAP15-1Q3LI76 137 aa11.08□□□□□ -0.64
VEGFC-202ENST00000618562 LCE2AQ5TA79 106 aaPredicted RBP11.07□□□□□ -0.64
VEGFC-202ENST00000618562 PP632Q6XCG6 107 aa10.96□□□□□ -0.66
VEGFC-202ENST00000618562 KRTAP9-3Q9BYQ3 159 aa10.88□□□□□ -0.67
VEGFC-202ENST00000618562 H3BS24 57 aa10.85□□□□□ -0.67
VEGFC-202ENST00000618562 KRTAP19-8Q3LI54 63 aa10.81□□□□□ -0.68
VEGFC-202ENST00000618562 PLAC4Q8WY50 150 aa10.78□□□□□ -0.68
VEGFC-202ENST00000618562 TNP1P09430 55 aa10.77□□□□□ -0.69
VEGFC-202ENST00000618562 KRTAP23-1A1A580 65 aa10.7□□□□□ -0.7
VEGFC-202ENST00000618562 MT1BP07438 61 aa10.69□□□□□ -0.7
VEGFC-202ENST00000618562 NDUFAF8A1L188 74 aa10.64□□□□□ -0.71
VEGFC-202ENST00000618562 LCE2BO14633 110 aa10.56□□□□□ -0.72
VEGFC-202ENST00000618562 MT1XP80297 61 aa10.4□□□□□ -0.75
VEGFC-202ENST00000618562 KRTAP10-5P60370 271 aa10.38□□□□□ -0.75
VEGFC-202ENST00000618562 USH2AO75445 5202 aa10.23□□□□□ -0.77
VEGFC-202ENST00000618562 LUZP6Q538Z0 58 aa10.19□□□□□ -0.78
VEGFC-202ENST00000618562 LCE3AQ5TA76 89 aa10.17□□□□□ -0.78
VEGFC-202ENST00000618562 PRO2289Q9P1D8 64 aa10.16□□□□□ -0.78
VEGFC-202ENST00000618562 SPRR5A0A1B0GTR4 108 aa10.11□□□□□ -0.79
VEGFC-202ENST00000618562 KRTAP10-7P60409 375 aaPredicted RBP10.01□□□□□ -0.81
VEGFC-202ENST00000618562 KRTAP8-1Q8IUC2 63 aa10□□□□□ -0.81
VEGFC-202ENST00000618562 LCE2DQ5TA82 110 aaPredicted RBP9.91□□□□□ -0.82
VEGFC-202ENST00000618562 SSPOA2VEC9 5147 aa9.9□□□□□ -0.82
VEGFC-202ENST00000618562 KRTAP10-12P60413 245 aa9.9□□□□□ -0.82
VEGFC-202ENST00000618562 FSIP2Q5CZC0 6907 aa9.8□□□□□ -0.84
VEGFC-202ENST00000618562 KRTAP19-6Q3LI70 58 aa9.8□□□□□ -0.84
VEGFC-202ENST00000618562 KRTAP12-3P60328 96 aa9.73□□□□□ -0.85
VEGFC-202ENST00000618562 KRTAP4-8A0A0G2JLE6 195 aa9.58□□□□□ -0.88
VEGFC-202ENST00000618562 KRTAP4-8Q9BYQ9 185 aa9.58□□□□□ -0.88
VEGFC-202ENST00000618562 KMT2DO14686 5537 aa9.57□□□□□ -0.88
VEGFC-202ENST00000618562 A0A0A0MQY5 61 aa9.52□□□□□ -0.88
VEGFC-202ENST00000618562 KRTAP19-5Q3LI72 72 aa9.44□□□□□ -0.9
VEGFC-202ENST00000618562 KRTAP9-2Q9BYQ4 174 aa9.44□□□□□ -0.9
VEGFC-202ENST00000618562 FCGBPQ9Y6R7 5405 aaPredicted RBP9.41□□□□□ -0.9
VEGFC-202ENST00000618562 KRTAP19-7Q3SYF9 63 aa9.28□□□□□ -0.92
VEGFC-202ENST00000618562 LCE3CQ5T5A8 94 aa9.16□□□□□ -0.94
VEGFC-202ENST00000618562 CRCT1Q9UGL9 99 aa9.13□□□□□ -0.95
VEGFC-202ENST00000618562 MT1EP04732 61 aa9.08□□□□□ -0.96
VEGFC-202ENST00000618562 MACF1Q9UPN3 7388 aaKnown RBP8.98□□□□□ -0.97
VEGFC-202ENST00000618562 MT1LQ93083 61 aa8.93□□□□□ -0.98
VEGFC-202ENST00000618562 KRTAP19-4Q3LI73 84 aa8.93□□□□□ -0.98
VEGFC-202ENST00000618562 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms