RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
EPHB4-210ENST00000616502 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.19
EPHB4-210ENST00000616502 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
EPHB4-210ENST00000616502 S4R3F8 94 aa7.58□□□□□ -1.2
EPHB4-210ENST00000616502 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
EPHB4-210ENST00000616502 RPS29P62273 56 aaKnown RBP7.52□□□□□ -1.21
EPHB4-210ENST00000616502 NDUFAF8A1L188 74 aa7.51□□□□□ -1.21
EPHB4-210ENST00000616502 RYR1P21817 5038 aa7.51□□□□□ -1.21
EPHB4-210ENST00000616502 RYR3Q15413 4870 aa7.5□□□□□ -1.21
EPHB4-210ENST00000616502 ALMS1Q8TCU4 4167 aa7.49□□□□□ -1.21
EPHB4-210ENST00000616502 P0C880 135 aa7.41□□□□□ -1.22
EPHB4-210ENST00000616502 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
EPHB4-210ENST00000616502 PKD1P98161 4303 aa7.38□□□□□ -1.23
EPHB4-210ENST00000616502 TPRXLQ17RH7 258 aa7.37□□□□□ -1.23
EPHB4-210ENST00000616502 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
EPHB4-210ENST00000616502 RYR2Q92736 4967 aa7.36□□□□□ -1.23
EPHB4-210ENST00000616502 KRTAP10-4P60372 401 aaPredicted RBP7.35□□□□□ -1.23
EPHB4-210ENST00000616502 XP32Q5T750 250 aa7.33□□□□□ -1.24
EPHB4-210ENST00000616502 KRTAP17-1Q9BYP8 105 aa7.31□□□□□ -1.24
EPHB4-210ENST00000616502 KRTAP10-6P60371 365 aaPredicted RBP7.29□□□□□ -1.24
EPHB4-210ENST00000616502 M0QZ58 72 aa7.28□□□□□ -1.24
EPHB4-210ENST00000616502 KRTAP10-8P60410 259 aa7.28□□□□□ -1.24
EPHB4-210ENST00000616502 R4GN34 69 aa7.27□□□□□ -1.25
EPHB4-210ENST00000616502 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
EPHB4-210ENST00000616502 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
EPHB4-210ENST00000616502 LRP2P98164 4655 aa7.2□□□□□ -1.26
EPHB4-210ENST00000616502 KRTAP3-3Q9BYR6 98 aa7.17□□□□□ -1.26
EPHB4-210ENST00000616502 KRTAP3-2Q9BYR7 98 aa7.15□□□□□ -1.26
EPHB4-210ENST00000616502 MT1HL1P0DM35 61 aa7.15□□□□□ -1.27
EPHB4-210ENST00000616502 CAMK2N1Q7Z7J9 78 aa7.14□□□□□ -1.27
EPHB4-210ENST00000616502 HSPG2P98160 4391 aa7.13□□□□□ -1.27
EPHB4-210ENST00000616502 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
EPHB4-210ENST00000616502 LPAP08519 4548 aa7.11□□□□□ -1.27
EPHB4-210ENST00000616502 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
EPHB4-210ENST00000616502 A0A0A0MQY5 61 aa7.08□□□□□ -1.28
EPHB4-210ENST00000616502 M0R2T5 61 aa7.04□□□□□ -1.28
EPHB4-210ENST00000616502 SEC61BP60468 96 aaKnown RBP7.04□□□□□ -1.28
EPHB4-210ENST00000616502 HERC2O95714 4834 aa7.01□□□□□ -1.29
EPHB4-210ENST00000616502 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
EPHB4-210ENST00000616502 PKHD1L1Q86WI1 4243 aa6.99□□□□□ -1.29
EPHB4-210ENST00000616502 ABCA13Q86UQ4 5058 aa6.98□□□□□ -1.29
EPHB4-210ENST00000616502 PLAC4Q8WY50 150 aa6.98□□□□□ -1.29
EPHB4-210ENST00000616502 MUC2Q02817 5179 aa6.96□□□□□ -1.29
EPHB4-210ENST00000616502 HERC1Q15751 4861 aa6.81□□□□□ -1.32
EPHB4-210ENST00000616502 TNXBP22105 4242 aa6.79□□□□□ -1.32
EPHB4-210ENST00000616502 RNF213Q63HN8 5207 aa6.76□□□□□ -1.33
EPHB4-210ENST00000616502 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
EPHB4-210ENST00000616502 FAT4Q6V0I7 4981 aa6.66□□□□□ -1.34
EPHB4-210ENST00000616502 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
EPHB4-210ENST00000616502 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
EPHB4-210ENST00000616502 TNP1P09430 55 aa6.62□□□□□ -1.35
EPHB4-210ENST00000616502 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
EPHB4-210ENST00000616502 UBR4Q5T4S7 5183 aa6.57□□□□□ -1.36
EPHB4-210ENST00000616502 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
EPHB4-210ENST00000616502 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
EPHB4-210ENST00000616502 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
EPHB4-210ENST00000616502 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
EPHB4-210ENST00000616502 MUC17Q685J3 4493 aa6.14□□□□□ -1.43
EPHB4-210ENST00000616502 MT1HP80294 61 aa6.06□□□□□ -1.44
EPHB4-210ENST00000616502 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
EPHB4-210ENST00000616502 USH2AO75445 5202 aa6.01□□□□□ -1.45
EPHB4-210ENST00000616502 KRTAP19-2Q3LHN2 52 aa5.99□□□□□ -1.45
EPHB4-210ENST00000616502 MT1FP04733 61 aa5.98□□□□□ -1.45
EPHB4-210ENST00000616502 FLGP20930 4061 aaPredicted RBP5.97□□□□□ -1.45
EPHB4-210ENST00000616502 LCE2CQ5TA81 110 aa5.96□□□□□ -1.46
EPHB4-210ENST00000616502 MT2AP02795 61 aa5.93□□□□□ -1.46
EPHB4-210ENST00000616502 KRTAP23-1A1A580 65 aa5.92□□□□□ -1.46
EPHB4-210ENST00000616502 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
EPHB4-210ENST00000616502 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
EPHB4-210ENST00000616502 KRTAP12-3P60328 96 aa5.77□□□□□ -1.49
EPHB4-210ENST00000616502 SPRR5A0A1B0GTR4 108 aa5.77□□□□□ -1.49
EPHB4-210ENST00000616502 KRTAP10-12P60413 245 aa5.75□□□□□ -1.49
EPHB4-210ENST00000616502 KMT2DO14686 5537 aa5.74□□□□□ -1.49
EPHB4-210ENST00000616502 SPRR2GQ9BYE4 73 aa5.74□□□□□ -1.49
EPHB4-210ENST00000616502 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
EPHB4-210ENST00000616502 INE1O15225 51 aa5.72□□□□□ -1.49
EPHB4-210ENST00000616502 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.52
EPHB4-210ENST00000616502 MT1BP07438 61 aa5.55□□□□□ -1.52
EPHB4-210ENST00000616502 KRTAP10-7P60409 375 aaPredicted RBP5.55□□□□□ -1.52
EPHB4-210ENST00000616502 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
EPHB4-210ENST00000616502 MT1XP80297 61 aa5.48□□□□□ -1.53
EPHB4-210ENST00000616502 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
EPHB4-210ENST00000616502 KRTAP9-3Q9BYQ3 159 aa5.48□□□□□ -1.53
EPHB4-210ENST00000616502 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
EPHB4-210ENST00000616502 LCE2BO14633 110 aa5.47□□□□□ -1.53
EPHB4-210ENST00000616502 DSTQ03001 7570 aaKnown RBP5.46□□□□□ -1.53
EPHB4-210ENST00000616502 KRTAP10-5P60370 271 aa5.46□□□□□ -1.54
EPHB4-210ENST00000616502 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
EPHB4-210ENST00000616502 KRTAP19-8Q3LI54 63 aa5.38□□□□□ -1.55
EPHB4-210ENST00000616502 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
EPHB4-210ENST00000616502 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
EPHB4-210ENST00000616502 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
EPHB4-210ENST00000616502 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
EPHB4-210ENST00000616502 LCE2AQ5TA79 106 aaPredicted RBP5.22□□□□□ -1.57
EPHB4-210ENST00000616502 KRTAP4-7Q9BYR0 210 aa5.2□□□□□ -1.58
EPHB4-210ENST00000616502 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
EPHB4-210ENST00000616502 SSPOA2VEC9 5147 aa5.17□□□□□ -1.58
EPHB4-210ENST00000616502 SYNE2Q8WXH0 6885 aaKnown RBP5.03□□□□□ -1.6
EPHB4-210ENST00000616502 SPRR2FQ96RM1 72 aa5□□□□□ -1.61
EPHB4-210ENST00000616502 KRTAP9-6A8MVA2 160 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms