RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 TNXBP22105 4242 aa5.84□□□□□ -1.47
SENP3-EIF4A1-201ENST00000614237 ROMO1P60602 79 aa5.83□□□□□ -1.48
SENP3-EIF4A1-201ENST00000614237 HSPG2P98160 4391 aa5.8□□□□□ -1.48
SENP3-EIF4A1-201ENST00000614237 FAT1Q14517 4588 aa5.8□□□□□ -1.48
SENP3-EIF4A1-201ENST00000614237 C10orf95Q9H7T3 257 aa5.79□□□□□ -1.48
SENP3-EIF4A1-201ENST00000614237 H1FX-AS1Q4G0G2 97 aa5.78□□□□□ -1.48
SENP3-EIF4A1-201ENST00000614237 FAT3Q8TDW7 4589 aa5.77□□□□□ -1.49
SENP3-EIF4A1-201ENST00000614237 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.49
SENP3-EIF4A1-201ENST00000614237 COX6B2Q6YFQ2 88 aa5.72□□□□□ -1.49
SENP3-EIF4A1-201ENST00000614237 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
SENP3-EIF4A1-201ENST00000614237 Q5VSD8 79 aa5.72□□□□□ -1.49
SENP3-EIF4A1-201ENST00000614237 A0A0A0MQY5 61 aa5.71□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 P0C880 135 aa5.7□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 RPL37P61927 97 aaKnown RBP5.68□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 RYR1P21817 5038 aa5.67□□□□□ -1.5
SENP3-EIF4A1-201ENST00000614237 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 XP32Q5T750 250 aa5.61□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 LRP1Q07954 4544 aaKnown RBP5.61□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 KRTAP13-4Q3LI77 160 aa5.59□□□□□ -1.51
SENP3-EIF4A1-201ENST00000614237 KRTAP4-5Q9BYR2 181 aa5.57□□□□□ -1.52
SENP3-EIF4A1-201ENST00000614237 MYCBP2O75592 4640 aa5.55□□□□□ -1.52
SENP3-EIF4A1-201ENST00000614237 HERC2O95714 4834 aa5.53□□□□□ -1.52
SENP3-EIF4A1-201ENST00000614237 ABCA13Q86UQ4 5058 aa5.53□□□□□ -1.52
SENP3-EIF4A1-201ENST00000614237 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SENP3-EIF4A1-201ENST00000614237 PCLOQ9Y6V0 5065 aa5.46□□□□□ -1.54
SENP3-EIF4A1-201ENST00000614237 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
SENP3-EIF4A1-201ENST00000614237 KRTAP10-6P60371 365 aaPredicted RBP5.45□□□□□ -1.54
SENP3-EIF4A1-201ENST00000614237 S4R3F8 94 aa5.45□□□□□ -1.54
SENP3-EIF4A1-201ENST00000614237 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
SENP3-EIF4A1-201ENST00000614237 J3QL48 77 aa5.38□□□□□ -1.55
SENP3-EIF4A1-201ENST00000614237 MUC17Q685J3 4493 aa5.32□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 HERC1Q15751 4861 aa5.31□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 KRTAP15-1Q3LI76 137 aa5.31□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 SEC61BP60468 96 aaKnown RBP5.28□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 M0QZ58 72 aa5.28□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 KRTAP12-1P59990 96 aa5.28□□□□□ -1.56
SENP3-EIF4A1-201ENST00000614237 LPAP08519 4548 aa5.24□□□□□ -1.57
SENP3-EIF4A1-201ENST00000614237 LRP2P98164 4655 aa5.24□□□□□ -1.57
SENP3-EIF4A1-201ENST00000614237 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
SENP3-EIF4A1-201ENST00000614237 R4GN34 69 aa5.22□□□□□ -1.57
SENP3-EIF4A1-201ENST00000614237 KRTAP19-2Q3LHN2 52 aa5.19□□□□□ -1.58
SENP3-EIF4A1-201ENST00000614237 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
SENP3-EIF4A1-201ENST00000614237 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
SENP3-EIF4A1-201ENST00000614237 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
SENP3-EIF4A1-201ENST00000614237 HMCN2Q8NDA2 5059 aa5.09□□□□□ -1.59
SENP3-EIF4A1-201ENST00000614237 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
SENP3-EIF4A1-201ENST00000614237 UBR4Q5T4S7 5183 aa5.01□□□□□ -1.61
SENP3-EIF4A1-201ENST00000614237 MUC2Q02817 5179 aa4.98□□□□□ -1.61
SENP3-EIF4A1-201ENST00000614237 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
SENP3-EIF4A1-201ENST00000614237 RNF213Q63HN8 5207 aa4.95□□□□□ -1.62
SENP3-EIF4A1-201ENST00000614237 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
SENP3-EIF4A1-201ENST00000614237 SPRR2GQ9BYE4 73 aa4.77□□□□□ -1.65
SENP3-EIF4A1-201ENST00000614237 FAT4Q6V0I7 4981 aa4.76□□□□□ -1.65
SENP3-EIF4A1-201ENST00000614237 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SENP3-EIF4A1-201ENST00000614237 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
SENP3-EIF4A1-201ENST00000614237 TNP1P09430 55 aa4.72□□□□□ -1.65
SENP3-EIF4A1-201ENST00000614237 MT1HP80294 61 aa4.71□□□□□ -1.66
SENP3-EIF4A1-201ENST00000614237 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
SENP3-EIF4A1-201ENST00000614237 KRTAP9-8Q9BYQ0 159 aa4.62□□□□□ -1.67
SENP3-EIF4A1-201ENST00000614237 M0R2T5 61 aa4.62□□□□□ -1.67
SENP3-EIF4A1-201ENST00000614237 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
SENP3-EIF4A1-201ENST00000614237 MT2AP02795 61 aa4.6□□□□□ -1.67
SENP3-EIF4A1-201ENST00000614237 MT1FP04733 61 aa4.56□□□□□ -1.68
SENP3-EIF4A1-201ENST00000614237 KRTAP10-10P60014 251 aa4.49□□□□□ -1.69
SENP3-EIF4A1-201ENST00000614237 LCE3AQ5TA76 89 aa4.47□□□□□ -1.69
SENP3-EIF4A1-201ENST00000614237 KRTAP9-3Q9BYQ3 159 aa4.45□□□□□ -1.7
SENP3-EIF4A1-201ENST00000614237 MT1BP07438 61 aa4.44□□□□□ -1.7
SENP3-EIF4A1-201ENST00000614237 LCE2AQ5TA79 106 aaPredicted RBP4.43□□□□□ -1.7
SENP3-EIF4A1-201ENST00000614237 SPRR5A0A1B0GTR4 108 aa4.41□□□□□ -1.7
SENP3-EIF4A1-201ENST00000614237 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
SENP3-EIF4A1-201ENST00000614237 MT1XP80297 61 aa4.38□□□□□ -1.71
SENP3-EIF4A1-201ENST00000614237 KRTAP8-1Q8IUC2 63 aa4.35□□□□□ -1.71
SENP3-EIF4A1-201ENST00000614237 PRO2289Q9P1D8 64 aa4.29□□□□□ -1.72
SENP3-EIF4A1-201ENST00000614237 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
SENP3-EIF4A1-201ENST00000614237 LCE2BO14633 110 aa4.21□□□□□ -1.73
SENP3-EIF4A1-201ENST00000614237 KRTAP10-12P60413 245 aa4.21□□□□□ -1.74
SENP3-EIF4A1-201ENST00000614237 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
SENP3-EIF4A1-201ENST00000614237 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SENP3-EIF4A1-201ENST00000614237 USH2AO75445 5202 aa4.19□□□□□ -1.74
SENP3-EIF4A1-201ENST00000614237 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
SENP3-EIF4A1-201ENST00000614237 INE1O15225 51 aa4.1□□□□□ -1.75
SENP3-EIF4A1-201ENST00000614237 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.76
SENP3-EIF4A1-201ENST00000614237 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
SENP3-EIF4A1-201ENST00000614237 LCE2DQ5TA82 110 aaPredicted RBP4.04□□□□□ -1.76
SENP3-EIF4A1-201ENST00000614237 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
SENP3-EIF4A1-201ENST00000614237 KRTAP19-5Q3LI72 72 aa3.99□□□□□ -1.77
SENP3-EIF4A1-201ENST00000614237 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SENP3-EIF4A1-201ENST00000614237 CRCT1Q9UGL9 99 aa3.89□□□□□ -1.79
SENP3-EIF4A1-201ENST00000614237 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
SENP3-EIF4A1-201ENST00000614237 DSTQ03001 7570 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms