RNA–Protein interactions for RNA: ENST00000612642.4

AMD1-207, Transcript of adenosylmethionine decarboxylase 1, humanhuman

TSL 1 (best)

Gene AMD1, Length 4,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMD1-207ENST00000612642 PRKDCP78527 4128 aaKnown RBP3.36□□□□□ -1.87
AMD1-207ENST00000612642 TRRAPQ9Y4A5 3859 aa3.36□□□□□ -1.87
AMD1-207ENST00000612642 DNAH9Q9NYC9 4486 aa3.35□□□□□ -1.87
AMD1-207ENST00000612642 KRTAP17-1Q9BYP8 105 aa3.33□□□□□ -1.88
AMD1-207ENST00000612642 DNAH10Q8IVF4 4471 aa3.3□□□□□ -1.88
AMD1-207ENST00000612642 DNAH2Q9P225 4427 aa3.28□□□□□ -1.88
AMD1-207ENST00000612642 VPS13DQ5THJ4 4388 aa3.27□□□□□ -1.89
AMD1-207ENST00000612642 DNAH17Q9UFH2 4485 aa3.27□□□□□ -1.89
AMD1-207ENST00000612642 LYSTQ99698 3801 aa3.27□□□□□ -1.89
AMD1-207ENST00000612642 FRAS1Q86XX4 4008 aa3.25□□□□□ -1.89
AMD1-207ENST00000612642 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
AMD1-207ENST00000612642 SRRM2Q9UQ35 2752 aaKnown RBP3.24□□□□□ -1.89
AMD1-207ENST00000612642 LCE2DQ5TA82 110 aaPredicted RBP3.22□□□□□ -1.89
AMD1-207ENST00000612642 DNAH11Q96DT5 4516 aa3.21□□□□□ -1.9
AMD1-207ENST00000612642 PKHD1L1Q86WI1 4243 aa3.21□□□□□ -1.9
AMD1-207ENST00000612642 KRTAP4-5Q9BYR2 181 aa3.21□□□□□ -1.9
AMD1-207ENST00000612642 PLECQ15149 4684 aaKnown RBP3.19□□□□□ -1.9
AMD1-207ENST00000612642 DNAH5Q8TE73 4624 aa3.19□□□□□ -1.9
AMD1-207ENST00000612642 DNAH8Q96JB1 4490 aa3.18□□□□□ -1.9
AMD1-207ENST00000612642 FAT2Q9NYQ8 4349 aa3.18□□□□□ -1.9
AMD1-207ENST00000612642 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
AMD1-207ENST00000612642 KRTAP10-12P60413 245 aa3.15□□□□□ -1.9
AMD1-207ENST00000612642 INE1O15225 51 aa3.14□□□□□ -1.91
AMD1-207ENST00000612642 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
AMD1-207ENST00000612642 COL7A1Q02388 2944 aa3.13□□□□□ -1.91
AMD1-207ENST00000612642 DYNC1H1Q14204 4646 aaKnown RBP3.13□□□□□ -1.91
AMD1-207ENST00000612642 PKHD1P08F94 4074 aa3.12□□□□□ -1.91
AMD1-207ENST00000612642 HECTD4Q9Y4D8 3996 aa3.12□□□□□ -1.91
AMD1-207ENST00000612642 PKD1P98161 4303 aa3.12□□□□□ -1.91
AMD1-207ENST00000612642 STARD9Q9P2P6 4700 aa3.11□□□□□ -1.91
AMD1-207ENST00000612642 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
AMD1-207ENST00000612642 LORP23490 312 aaPredicted RBP3.08□□□□□ -1.92
AMD1-207ENST00000612642 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
AMD1-207ENST00000612642 VPS13BQ7Z7G8 4022 aa3.06□□□□□ -1.92
AMD1-207ENST00000612642 SPRR2GQ9BYE4 73 aa3.05□□□□□ -1.92
AMD1-207ENST00000612642 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
AMD1-207ENST00000612642 KRTAP4-1Q9BYQ7 146 aa3.04□□□□□ -1.92
AMD1-207ENST00000612642 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
AMD1-207ENST00000612642 RYR2Q92736 4967 aa3.02□□□□□ -1.93
AMD1-207ENST00000612642 MT1HP80294 61 aa3□□□□□ -1.93
AMD1-207ENST00000612642 KRTAP19-4Q3LI73 84 aa2.99□□□□□ -1.93
AMD1-207ENST00000612642 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
AMD1-207ENST00000612642 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
AMD1-207ENST00000612642 LOC100996750A0A140TA64 210 aa2.97□□□□□ -1.93
AMD1-207ENST00000612642 KRTAP4-6Q9BYQ5 205 aa2.97□□□□□ -1.93
AMD1-207ENST00000612642 MT2AP02795 61 aa2.96□□□□□ -1.94
AMD1-207ENST00000612642 FAT3Q8TDW7 4589 aa2.96□□□□□ -1.94
AMD1-207ENST00000612642 APOBP04114 4563 aaKnown RBP2.93□□□□□ -1.94
AMD1-207ENST00000612642 HSPG2P98160 4391 aa2.91□□□□□ -1.94
AMD1-207ENST00000612642 FAT1Q14517 4588 aa2.91□□□□□ -1.94
AMD1-207ENST00000612642 KRTAP19-8Q3LI54 63 aa2.89□□□□□ -1.95
AMD1-207ENST00000612642 KRTAP8-1Q8IUC2 63 aa2.88□□□□□ -1.95
AMD1-207ENST00000612642 MT1FP04733 61 aa2.88□□□□□ -1.95
AMD1-207ENST00000612642 TNXBP22105 4242 aa2.87□□□□□ -1.95
AMD1-207ENST00000612642 RYR1P21817 5038 aa2.86□□□□□ -1.95
AMD1-207ENST00000612642 RYR3Q15413 4870 aa2.85□□□□□ -1.95
AMD1-207ENST00000612642 HERC1Q15751 4861 aa2.85□□□□□ -1.95
AMD1-207ENST00000612642 KMT2CQ8NEZ4 4911 aaKnown RBP2.83□□□□□ -1.96
AMD1-207ENST00000612642 MYCBP2O75592 4640 aa2.83□□□□□ -1.96
AMD1-207ENST00000612642 KRTAP19-1Q8IUB9 90 aa2.81□□□□□ -1.96
AMD1-207ENST00000612642 LCE3CQ5T5A8 94 aa2.76□□□□□ -1.97
AMD1-207ENST00000612642 KIAA1109Q2LD37 5005 aa2.75□□□□□ -1.97
AMD1-207ENST00000612642 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
AMD1-207ENST00000612642 HERC2O95714 4834 aa2.75□□□□□ -1.97
AMD1-207ENST00000612642 MUC17Q685J3 4493 aa2.74□□□□□ -1.97
AMD1-207ENST00000612642 LRP1Q07954 4544 aaKnown RBP2.74□□□□□ -1.97
AMD1-207ENST00000612642 KRTAP19-5Q3LI72 72 aa2.74□□□□□ -1.97
AMD1-207ENST00000612642 SPRR5A0A1B0GTR4 108 aa2.73□□□□□ -1.97
AMD1-207ENST00000612642 LCE2CQ5TA81 110 aa2.73□□□□□ -1.97
AMD1-207ENST00000612642 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
AMD1-207ENST00000612642 KRTAP9-8Q9BYQ0 159 aa2.72□□□□□ -1.97
AMD1-207ENST00000612642 CRCT1Q9UGL9 99 aa2.72□□□□□ -1.97
AMD1-207ENST00000612642 MT1XP80297 61 aa2.71□□□□□ -1.98
AMD1-207ENST00000612642 MT1BP07438 61 aa2.71□□□□□ -1.98
AMD1-207ENST00000612642 EPPK1P58107 5090 aaKnown RBP2.69□□□□□ -1.98
AMD1-207ENST00000612642 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
AMD1-207ENST00000612642 KRTAP9-3Q9BYQ3 159 aa2.66□□□□□ -1.98
AMD1-207ENST00000612642 KRTAP10-7P60409 375 aaPredicted RBP2.66□□□□□ -1.98
AMD1-207ENST00000612642 ABCA13Q86UQ4 5058 aa2.63□□□□□ -1.99
AMD1-207ENST00000612642 SPRR2FQ96RM1 72 aa2.59□□□□□ -2
AMD1-207ENST00000612642 MT1GP13640 62 aa2.55□□□□□ -2
AMD1-207ENST00000612642 FLGP20930 4061 aaPredicted RBP2.54□□□□□ -2
AMD1-207ENST00000612642 LRP2P98164 4655 aa2.54□□□□□ -2
AMD1-207ENST00000612642 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
AMD1-207ENST00000612642 LCE2BO14633 110 aa2.5□□□□□ -2.01
AMD1-207ENST00000612642 LCE2AQ5TA79 106 aaPredicted RBP2.49□□□□□ -2.01
AMD1-207ENST00000612642 HMCN2Q8NDA2 5059 aa2.47□□□□□ -2.01
AMD1-207ENST00000612642 MT1LQ93083 61 aa2.47□□□□□ -2.01
AMD1-207ENST00000612642 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.46□□□□□ -2.02
AMD1-207ENST00000612642 KRTAP19-6Q3LI70 58 aa2.45□□□□□ -2.02
AMD1-207ENST00000612642 MT1EP04732 61 aa2.44□□□□□ -2.02
AMD1-207ENST00000612642 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
AMD1-207ENST00000612642 KRTAP4-8Q9BYQ9 185 aa2.44□□□□□ -2.02
AMD1-207ENST00000612642 KRTAP4-8A0A0G2JLE6 195 aa2.44□□□□□ -2.02
AMD1-207ENST00000612642 SPRR2EP22531 72 aa2.43□□□□□ -2.02
AMD1-207ENST00000612642 SPRR2BP35325 72 aa2.43□□□□□ -2.02
AMD1-207ENST00000612642 SPRR2AP35326 72 aa2.43□□□□□ -2.02
AMD1-207ENST00000612642 LPAP08519 4548 aa2.41□□□□□ -2.02
AMD1-207ENST00000612642 SPRR2DP22532 72 aa2.37□□□□□ -2.03
AMD1-207ENST00000612642 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms