RNA–Protein interactions for RNA: ENST00000612199.4

SRGAP2B-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRGAP2B, Length 7,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2B-204ENST00000612199 KRTAP8-1Q8IUC2 63 aa4.36□□□□□ -1.71
SRGAP2B-204ENST00000612199 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
SRGAP2B-204ENST00000612199 FRAS1Q86XX4 4008 aa4.35□□□□□ -1.71
SRGAP2B-204ENST00000612199 KRTAP10-4P60372 401 aaPredicted RBP4.35□□□□□ -1.71
SRGAP2B-204ENST00000612199 ANK2Q01484 3957 aa4.35□□□□□ -1.71
SRGAP2B-204ENST00000612199 DNAH9Q9NYC9 4486 aa4.32□□□□□ -1.72
SRGAP2B-204ENST00000612199 KMT2AQ03164 3969 aa4.31□□□□□ -1.72
SRGAP2B-204ENST00000612199 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
SRGAP2B-204ENST00000612199 ALMS1Q8TCU4 4167 aa4.31□□□□□ -1.72
SRGAP2B-204ENST00000612199 KRTAP3-2Q9BYR7 98 aa4.28□□□□□ -1.72
SRGAP2B-204ENST00000612199 KRTAP3-3Q9BYR6 98 aa4.27□□□□□ -1.73
SRGAP2B-204ENST00000612199 INE1O15225 51 aa4.27□□□□□ -1.73
SRGAP2B-204ENST00000612199 DNAH5Q8TE73 4624 aa4.27□□□□□ -1.73
SRGAP2B-204ENST00000612199 DNAH1Q9P2D7 4330 aa4.26□□□□□ -1.73
SRGAP2B-204ENST00000612199 PLECQ15149 4684 aaKnown RBP4.25□□□□□ -1.73
SRGAP2B-204ENST00000612199 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
SRGAP2B-204ENST00000612199 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
SRGAP2B-204ENST00000612199 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
SRGAP2B-204ENST00000612199 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
SRGAP2B-204ENST00000612199 PRKDCP78527 4128 aaKnown RBP4.16□□□□□ -1.74
SRGAP2B-204ENST00000612199 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
SRGAP2B-204ENST00000612199 FAT1Q14517 4588 aa4.13□□□□□ -1.75
SRGAP2B-204ENST00000612199 SPRR2FQ96RM1 72 aa4.12□□□□□ -1.75
SRGAP2B-204ENST00000612199 DNAH2Q9P225 4427 aa4.11□□□□□ -1.75
SRGAP2B-204ENST00000612199 DNAH8Q96JB1 4490 aa4.1□□□□□ -1.75
SRGAP2B-204ENST00000612199 VPS13BQ7Z7G8 4022 aa4.09□□□□□ -1.75
SRGAP2B-204ENST00000612199 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
SRGAP2B-204ENST00000612199 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.76
SRGAP2B-204ENST00000612199 DNAH6Q9C0G6 4158 aa4.08□□□□□ -1.76
SRGAP2B-204ENST00000612199 VPS13DQ5THJ4 4388 aa4.07□□□□□ -1.76
SRGAP2B-204ENST00000612199 LRP1BQ9NZR2 4599 aa4.05□□□□□ -1.76
SRGAP2B-204ENST00000612199 DYNC1H1Q14204 4646 aaKnown RBP4.05□□□□□ -1.76
SRGAP2B-204ENST00000612199 RYR1P21817 5038 aa4.04□□□□□ -1.76
SRGAP2B-204ENST00000612199 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
SRGAP2B-204ENST00000612199 DNAH17Q9UFH2 4485 aa4.01□□□□□ -1.77
SRGAP2B-204ENST00000612199 SPRR2EP22531 72 aa4.01□□□□□ -1.77
SRGAP2B-204ENST00000612199 SPRR2BP35325 72 aa4.01□□□□□ -1.77
SRGAP2B-204ENST00000612199 SPRR2AP35326 72 aa4.01□□□□□ -1.77
SRGAP2B-204ENST00000612199 KRTAP4-1Q9BYQ7 146 aa3.99□□□□□ -1.77
SRGAP2B-204ENST00000612199 HECTD4Q9Y4D8 3996 aa3.96□□□□□ -1.77
SRGAP2B-204ENST00000612199 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
SRGAP2B-204ENST00000612199 SACSQ9NZJ4 4579 aa3.93□□□□□ -1.78
SRGAP2B-204ENST00000612199 FAT2Q9NYQ8 4349 aa3.91□□□□□ -1.78
SRGAP2B-204ENST00000612199 KIAA1109Q2LD37 5005 aa3.9□□□□□ -1.79
SRGAP2B-204ENST00000612199 DYNC2H1Q8NCM8 4307 aaKnown RBP3.89□□□□□ -1.79
SRGAP2B-204ENST00000612199 SPRR2DP22532 72 aa3.86□□□□□ -1.79
SRGAP2B-204ENST00000612199 FAT3Q8TDW7 4589 aa3.86□□□□□ -1.79
SRGAP2B-204ENST00000612199 APOBP04114 4563 aaKnown RBP3.86□□□□□ -1.79
SRGAP2B-204ENST00000612199 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
SRGAP2B-204ENST00000612199 RYR3Q15413 4870 aa3.84□□□□□ -1.79
SRGAP2B-204ENST00000612199 MT1HP80294 61 aa3.84□□□□□ -1.79
SRGAP2B-204ENST00000612199 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
SRGAP2B-204ENST00000612199 KRTAP17-1Q9BYP8 105 aa3.79□□□□□ -1.8
SRGAP2B-204ENST00000612199 MT2AP02795 61 aa3.78□□□□□ -1.8
SRGAP2B-204ENST00000612199 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
SRGAP2B-204ENST00000612199 SPRR2GQ9BYE4 73 aa3.74□□□□□ -1.81
SRGAP2B-204ENST00000612199 MT1FP04733 61 aa3.74□□□□□ -1.81
SRGAP2B-204ENST00000612199 LPAP08519 4548 aa3.73□□□□□ -1.81
SRGAP2B-204ENST00000612199 HYDINQ4G0P3 5121 aa3.71□□□□□ -1.82
SRGAP2B-204ENST00000612199 LCE2BO14633 110 aa3.7□□□□□ -1.82
SRGAP2B-204ENST00000612199 KRTAP12-4P60329 112 aa3.67□□□□□ -1.82
SRGAP2B-204ENST00000612199 LRP2P98164 4655 aa3.66□□□□□ -1.82
SRGAP2B-204ENST00000612199 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
SRGAP2B-204ENST00000612199 HERC2O95714 4834 aa3.64□□□□□ -1.83
SRGAP2B-204ENST00000612199 MT4P47944 62 aa3.63□□□□□ -1.83
SRGAP2B-204ENST00000612199 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
SRGAP2B-204ENST00000612199 RYR2Q92736 4967 aa3.61□□□□□ -1.83
SRGAP2B-204ENST00000612199 HSPG2P98160 4391 aa3.6□□□□□ -1.83
SRGAP2B-204ENST00000612199 KRTAP19-5Q3LI72 72 aa3.57□□□□□ -1.84
SRGAP2B-204ENST00000612199 PKD1P98161 4303 aa3.56□□□□□ -1.84
SRGAP2B-204ENST00000612199 KRTAP19-4Q3LI73 84 aa3.56□□□□□ -1.84
SRGAP2B-204ENST00000612199 KRTAP19-1Q8IUB9 90 aa3.54□□□□□ -1.84
SRGAP2B-204ENST00000612199 LCE3CQ5T5A8 94 aa3.53□□□□□ -1.84
SRGAP2B-204ENST00000612199 LCE3EQ5T5B0 92 aa3.52□□□□□ -1.85
SRGAP2B-204ENST00000612199 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
SRGAP2B-204ENST00000612199 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
SRGAP2B-204ENST00000612199 KMT2CQ8NEZ4 4911 aaKnown RBP3.51□□□□□ -1.85
SRGAP2B-204ENST00000612199 PKHD1L1Q86WI1 4243 aa3.51□□□□□ -1.85
SRGAP2B-204ENST00000612199 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
SRGAP2B-204ENST00000612199 TNXBP22105 4242 aa3.48□□□□□ -1.85
SRGAP2B-204ENST00000612199 MT1GP13640 62 aa3.46□□□□□ -1.86
SRGAP2B-204ENST00000612199 BIRC6Q9NR09 4857 aa3.44□□□□□ -1.86
SRGAP2B-204ENST00000612199 HERC1Q15751 4861 aa3.44□□□□□ -1.86
SRGAP2B-204ENST00000612199 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
SRGAP2B-204ENST00000612199 MT1XP80297 61 aa3.41□□□□□ -1.86
SRGAP2B-204ENST00000612199 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
SRGAP2B-204ENST00000612199 MT1BP07438 61 aa3.4□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE5AQ5TCM9 118 aa3.39□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 LCE1AQ5T7P2 110 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
SRGAP2B-204ENST00000612199 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
SRGAP2B-204ENST00000612199 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.87
SRGAP2B-204ENST00000612199 KRTAP9-3Q9BYQ3 159 aa3.32□□□□□ -1.88
SRGAP2B-204ENST00000612199 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
SRGAP2B-204ENST00000612199 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms